RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 ARHGEF1Q92888 912 aaKnown RBP13.92□□□□□ -0.18
TFF3-203ENST00000489676 STK32BQ9NY57 414 aa13.92□□□□□ -0.18
TFF3-203ENST00000489676 NOB1Q9ULX3 412 aaKnown RBP13.92□□□□□ -0.18
TFF3-203ENST00000489676 ABCC4O15439 1325 aa13.91□□□□□ -0.18
TFF3-203ENST00000489676 ATP10DQ9P241 1426 aa13.91□□□□□ -0.18
TFF3-203ENST00000489676 A0A087WZG4 1122 aa13.91□□□□□ -0.18
TFF3-203ENST00000489676 RGL2O15211 777 aa13.91□□□□□ -0.18
TFF3-203ENST00000489676 PHF14O94880 888 aa13.91□□□□□ -0.18
TFF3-203ENST00000489676 RRP1P56182 461 aaKnown RBP13.91□□□□□ -0.18
TFF3-203ENST00000489676 AIMP1Q12904 312 aaKnown RBP13.91□□□□□ -0.18
TFF3-203ENST00000489676 FKBP5Q13451 457 aaPredicted RBP13.91□□□□□ -0.18
TFF3-203ENST00000489676 ATF7IPQ6VMQ6 1270 aa13.91□□□□□ -0.18
TFF3-203ENST00000489676 TFCP2L1Q9NZI6 479 aa13.91□□□□□ -0.18
TFF3-203ENST00000489676 TNNQ9UQP3 1299 aa13.91□□□□□ -0.18
TFF3-203ENST00000489676 ZNF330Q9Y3S2 320 aaPredicted RBP13.91□□□□□ -0.18
TFF3-203ENST00000489676 PI4KAP2A4QPH2 592 aa13.9□□□□□ -0.18
TFF3-203ENST00000489676 ERVV-1B6SEH8 477 aa13.9□□□□□ -0.18
TFF3-203ENST00000489676 KSR2Q6VAB6 950 aa13.9□□□□□ -0.18
TFF3-203ENST00000489676 COL23A1Q86Y22 540 aaPredicted RBP13.9□□□□□ -0.18
TFF3-203ENST00000489676 PI4KAP1Q8N8J0 262 aa13.9□□□□□ -0.18
TFF3-203ENST00000489676 FLAD1Q8NFF5 587 aa13.9□□□□□ -0.18
TFF3-203ENST00000489676 BCL2L12Q9HB09 334 aa13.9□□□□□ -0.18
TFF3-203ENST00000489676 NARFQ9UHQ1 456 aa13.9□□□□□ -0.18
TFF3-203ENST00000489676 TBC1D2BQ9UPU7 963 aa13.9□□□□□ -0.18
TFF3-203ENST00000489676 IBTKQ9P2D0 1353 aaPredicted RBP13.89□□□□□ -0.19
TFF3-203ENST00000489676 F6X3S4 739 aa13.89□□□□□ -0.19
TFF3-203ENST00000489676 DDX58O95786 925 aaKnown RBP13.89□□□□□ -0.19
TFF3-203ENST00000489676 TRAPPC3LQ5T215 181 aa13.89□□□□□ -0.19
TFF3-203ENST00000489676 ZKSCAN2Q63HK3 967 aa13.89□□□□□ -0.19
TFF3-203ENST00000489676 KIF6Q6ZMV9 814 aa13.89□□□□□ -0.19
TFF3-203ENST00000489676 ANKRD13DQ6ZTN6 518 aa13.89□□□□□ -0.19
TFF3-203ENST00000489676 FRAT1Q92837 279 aaPredicted RBP13.89□□□□□ -0.19
TFF3-203ENST00000489676 API5Q9BZZ5 524 aaKnown RBP13.89□□□□□ -0.19
TFF3-203ENST00000489676 ZBTB3Q9H5J0 574 aa13.89□□□□□ -0.19
TFF3-203ENST00000489676 SRP68Q9UHB9 627 aaKnown RBP13.89□□□□□ -0.19
TFF3-203ENST00000489676 AFDNP55196 1824 aaKnown RBP13.89□□□□□ -0.19
TFF3-203ENST00000489676 IPO8O15397 1037 aaKnown RBP13.88□□□□□ -0.19
TFF3-203ENST00000489676 PLIN1O60240 522 aa13.88□□□□□ -0.19
TFF3-203ENST00000489676 RLBP1P12271 317 aa13.88□□□□□ -0.19
TFF3-203ENST00000489676 HLFQ16534 295 aa13.88□□□□□ -0.19
TFF3-203ENST00000489676 GIGYF2Q6Y7W6 1299 aaKnown RBP13.88□□□□□ -0.19
TFF3-203ENST00000489676 DNAAF4Q8WXU2 420 aa13.88□□□□□ -0.19
TFF3-203ENST00000489676 MAP3K2Q9Y2U5 619 aa13.88□□□□□ -0.19
TFF3-203ENST00000489676 PSDA5PKW4 1024 aaPredicted RBP13.87□□□□□ -0.19
TFF3-203ENST00000489676 GYS1P13807 737 aa13.87□□□□□ -0.19
TFF3-203ENST00000489676 RFC4P35249 363 aa13.87□□□□□ -0.19
TFF3-203ENST00000489676 USPL1Q5W0Q7 1092 aa13.87□□□□□ -0.19
TFF3-203ENST00000489676 METTL22Q9BUU2 404 aaPredicted RBP13.87□□□□□ -0.19
TFF3-203ENST00000489676 SUPT16HQ9Y5B9 1047 aaKnown RBP13.87□□□□□ -0.19
TFF3-203ENST00000489676 NRXN2Q9P2S2 1712 aa13.87□□□□□ -0.19
TFF3-203ENST00000489676 IGKV5-2P06315 115 aa13.86□□□□□ -0.19
TFF3-203ENST00000489676 BEND3Q5T5X7 828 aa13.86□□□□□ -0.19
TFF3-203ENST00000489676 C20orf194Q5TEA3 1177 aa13.86□□□□□ -0.19
TFF3-203ENST00000489676 CLEC4GQ6UXB4 293 aa13.86□□□□□ -0.19
TFF3-203ENST00000489676 RIC3Q7Z5B4 369 aa13.86□□□□□ -0.19
TFF3-203ENST00000489676 NPM2Q86SE8 214 aaKnown RBP13.86□□□□□ -0.19
TFF3-203ENST00000489676 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.86□□□□□ -0.19
TFF3-203ENST00000489676 ISCA1Q9BUE6 129 aa13.86□□□□□ -0.19
TFF3-203ENST00000489676 PDGFDQ9GZP0 370 aaPredicted RBP13.86□□□□□ -0.19
TFF3-203ENST00000489676 UBN2Q6ZU65 1347 aa13.86□□□□□ -0.19
TFF3-203ENST00000489676 ZPR1O75312 459 aa13.85□□□□□ -0.19
TFF3-203ENST00000489676 TCIRG1Q13488 830 aa13.85□□□□□ -0.19
TFF3-203ENST00000489676 FKBP8Q14318 412 aa13.85□□□□□ -0.19
TFF3-203ENST00000489676 PDE3AQ14432 1141 aa13.85□□□□□ -0.19
TFF3-203ENST00000489676 INTS3Q68E01 1043 aaKnown RBP13.85□□□□□ -0.19
TFF3-203ENST00000489676 DZIP1LQ8IYY4 767 aaKnown RBP13.85□□□□□ -0.19
TFF3-203ENST00000489676 CLUAP1Q96AJ1 413 aa13.85□□□□□ -0.19
TFF3-203ENST00000489676 LAMB2P55268 1798 aa13.84□□□□□ -0.19
TFF3-203ENST00000489676 TRIM28Q13263 835 aaKnown RBP13.84□□□□□ -0.19
TFF3-203ENST00000489676 R3HDM1Q15032 1099 aaKnown RBP13.84□□□□□ -0.19
TFF3-203ENST00000489676 ZNF34Q8IZ26 560 aa13.84□□□□□ -0.19
TFF3-203ENST00000489676 LINS1Q8NG48 757 aa13.84□□□□□ -0.19
TFF3-203ENST00000489676 PANK1Q8TE04 598 aa13.84□□□□□ -0.19
TFF3-203ENST00000489676 MYD88Q99836 296 aa13.84□□□□□ -0.19
TFF3-203ENST00000489676 ZNF652Q9Y2D9 606 aa13.84□□□□□ -0.19
TFF3-203ENST00000489676 NEURL1BA8MQ27 555 aa13.83□□□□□ -0.2
TFF3-203ENST00000489676 HSP90AB3PQ58FF7 597 aa13.83□□□□□ -0.2
TFF3-203ENST00000489676 TBC1D9BQ66K14 1250 aa13.83□□□□□ -0.2
TFF3-203ENST00000489676 TMEM57Q8N5G2 664 aa13.83□□□□□ -0.2
TFF3-203ENST00000489676 ARXQ96QS3 562 aa13.83□□□□□ -0.2
TFF3-203ENST00000489676 ATP5J2-PTCD1G3V325 749 aa13.82□□□□□ -0.2
TFF3-203ENST00000489676 MS4A1P11836 297 aa13.82□□□□□ -0.2
TFF3-203ENST00000489676 CCT4P50991 539 aaKnown RBP13.82□□□□□ -0.2
TFF3-203ENST00000489676 CWF19L2Q2TBE0 894 aaKnown RBP13.82□□□□□ -0.2
TFF3-203ENST00000489676 SLC4A10Q6U841 1118 aa13.82□□□□□ -0.2
TFF3-203ENST00000489676 NLRP10Q86W26 655 aa13.82□□□□□ -0.2
TFF3-203ENST00000489676 FTSJ3Q8IY81 847 aaKnown RBP13.82□□□□□ -0.2
TFF3-203ENST00000489676 SLC16A10Q8TF71 515 aa13.82□□□□□ -0.2
TFF3-203ENST00000489676 CARMIL3Q8ND23 1372 aa13.82□□□□□ -0.2
TFF3-203ENST00000489676 DDX60Q8IY21 1712 aaKnown RBP13.81□□□□□ -0.2
TFF3-203ENST00000489676 ALDH1L1O75891 902 aa13.81□□□□□ -0.2
TFF3-203ENST00000489676 GPTP24298 496 aa13.81□□□□□ -0.2
TFF3-203ENST00000489676 TM4SF1P30408 202 aa13.81□□□□□ -0.2
TFF3-203ENST00000489676 DDR1Q08345 913 aa13.81□□□□□ -0.2
TFF3-203ENST00000489676 NEXNQ0ZGT2 675 aa13.81□□□□□ -0.2
TFF3-203ENST00000489676 NFIXQ14938 502 aa13.81□□□□□ -0.2
TFF3-203ENST00000489676 CCDC191Q8NCU4 936 aa13.81□□□□□ -0.2
TFF3-203ENST00000489676 SRCIN1Q9C0H9 1055 aa13.81□□□□□ -0.2
TFF3-203ENST00000489676 MSH5O43196 834 aa13.8□□□□□ -0.2
TFF3-203ENST00000489676 NTSR2O95665 410 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms