RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 PI4KAP1Q8N8J0 262 aa17.89■□□□□ 0.45
VPS26A-205ENST00000489656 XAGE3Q8WTP9 111 aa17.89■□□□□ 0.45
VPS26A-205ENST00000489656 POTEAQ6S8J7 498 aa17.88■□□□□ 0.45
VPS26A-205ENST00000489656 COPS6Q7L5N1 327 aa17.88■□□□□ 0.45
VPS26A-205ENST00000489656 ATP6V1AP38606 617 aa17.87■□□□□ 0.45
VPS26A-205ENST00000489656 SLC4A10Q6U841 1118 aa17.87■□□□□ 0.45
VPS26A-205ENST00000489656 PTF1AQ7RTS3 328 aa17.87■□□□□ 0.45
VPS26A-205ENST00000489656 MAP3K2Q9Y2U5 619 aa17.87■□□□□ 0.45
VPS26A-205ENST00000489656 BEND3Q5T5X7 828 aa17.86■□□□□ 0.45
VPS26A-205ENST00000489656 SRCIN1Q9C0H9 1055 aa17.86■□□□□ 0.45
VPS26A-205ENST00000489656 ALDH1L1O75891 902 aa17.85■□□□□ 0.45
VPS26A-205ENST00000489656 C4BP0C0L5 1744 aa17.85■□□□□ 0.45
VPS26A-205ENST00000489656 PIP4K2AP48426 406 aaPredicted RBP17.85■□□□□ 0.45
VPS26A-205ENST00000489656 AIMP1Q12904 312 aaKnown RBP17.85■□□□□ 0.45
VPS26A-205ENST00000489656 ITPK1Q13572 414 aa17.85■□□□□ 0.45
VPS26A-205ENST00000489656 ANKRD13DQ6ZTN6 518 aa17.85■□□□□ 0.45
VPS26A-205ENST00000489656 KDM2BQ8NHM5 1336 aa17.85■□□□□ 0.45
VPS26A-205ENST00000489656 PLBD2Q8NHP8 589 aa17.85■□□□□ 0.45
VPS26A-205ENST00000489656 EP400Q96L91 3159 aa17.85■□□□□ 0.45
VPS26A-205ENST00000489656 PCDHB15Q9Y5E8 787 aa17.85■□□□□ 0.45
VPS26A-205ENST00000489656 IL6STP40189 918 aaPredicted RBP17.84■□□□□ 0.45
VPS26A-205ENST00000489656 RIC3Q7Z5B4 369 aa17.84■□□□□ 0.45
VPS26A-205ENST00000489656 METTL22Q9BUU2 404 aaPredicted RBP17.84■□□□□ 0.45
VPS26A-205ENST00000489656 UBR3Q6ZT12 1888 aa17.84■□□□□ 0.45
VPS26A-205ENST00000489656 ATXN8OSP0DMR3 200 aa17.83■□□□□ 0.44
VPS26A-205ENST00000489656 INTS5Q6P9B9 1019 aaKnown RBP17.83■□□□□ 0.44
VPS26A-205ENST00000489656 LINS1Q8NG48 757 aa17.83■□□□□ 0.44
VPS26A-205ENST00000489656 CCDC87Q9NVE4 849 aa17.83■□□□□ 0.44
VPS26A-205ENST00000489656 ZBTB1Q9Y2K1 713 aa17.83■□□□□ 0.44
VPS26A-205ENST00000489656 SCN7AQ01118 1682 aa17.83■□□□□ 0.44
VPS26A-205ENST00000489656 CNTNAP4Q9C0A0 1308 aa17.82■□□□□ 0.44
VPS26A-205ENST00000489656 GNAI3P08754 354 aa17.82■□□□□ 0.44
VPS26A-205ENST00000489656 TTLL7Q6ZT98 887 aa17.82■□□□□ 0.44
VPS26A-205ENST00000489656 CENPQQ7L2Z9 268 aaPredicted RBP17.82■□□□□ 0.44
VPS26A-205ENST00000489656 MEIS3Q99687 375 aa17.82■□□□□ 0.44
VPS26A-205ENST00000489656 C4AP0C0L4 1744 aa17.81■□□□□ 0.44
VPS26A-205ENST00000489656 CRKLP46109 303 aaKnown RBP17.81■□□□□ 0.44
VPS26A-205ENST00000489656 NEXNQ0ZGT2 675 aa17.81■□□□□ 0.44
VPS26A-205ENST00000489656 HDAC1Q13547 482 aaPredicted RBP17.81■□□□□ 0.44
VPS26A-205ENST00000489656 RC3H1Q5TC82 1133 aaKnown RBP17.81■□□□□ 0.44
VPS26A-205ENST00000489656 USP44Q9H0E7 712 aa17.81■□□□□ 0.44
VPS26A-205ENST00000489656 EIF5P55010 431 aaKnown RBP17.8■□□□□ 0.44
VPS26A-205ENST00000489656 LINC00116Q8NCU8 138 aa17.8■□□□□ 0.44
VPS26A-205ENST00000489656 MYH3P11055 1940 aa17.8■□□□□ 0.44
VPS26A-205ENST00000489656 UTYO14607 1347 aa17.79■□□□□ 0.44
VPS26A-205ENST00000489656 IGKV5-2P06315 115 aa17.79■□□□□ 0.44
VPS26A-205ENST00000489656 KIF6Q6ZMV9 814 aa17.79■□□□□ 0.44
VPS26A-205ENST00000489656 RWDD1Q9H446 243 aaPredicted RBP17.79■□□□□ 0.44
VPS26A-205ENST00000489656 CCNL1Q9UK58 526 aaPredicted RBP17.79■□□□□ 0.44
VPS26A-205ENST00000489656 MAP3K15Q6ZN16 1313 aa17.78■□□□□ 0.44
VPS26A-205ENST00000489656 NEURL1BA8MQ27 555 aa17.78■□□□□ 0.44
VPS26A-205ENST00000489656 TRIM37O94972 964 aa17.78■□□□□ 0.44
VPS26A-205ENST00000489656 GNAI2P04899 355 aa17.78■□□□□ 0.44
VPS26A-205ENST00000489656 RPAP2Q8IXW5 612 aaPredicted RBP17.78■□□□□ 0.44
VPS26A-205ENST00000489656 MYD88Q99836 296 aa17.78■□□□□ 0.44
VPS26A-205ENST00000489656 ERVV-1B6SEH8 477 aa17.77■□□□□ 0.44
VPS26A-205ENST00000489656 IGHDP01880 384 aa17.77■□□□□ 0.44
VPS26A-205ENST00000489656 HMGB2P26583 209 aaKnown RBP17.77■□□□□ 0.44
VPS26A-205ENST00000489656 SLC27A3Q5K4L6 730 aa17.77■□□□□ 0.44
VPS26A-205ENST00000489656 SAMD1Q6SPF0 538 aaPredicted RBP17.77■□□□□ 0.44
VPS26A-205ENST00000489656 C1orf115Q9H7X2 142 aa17.77■□□□□ 0.44
VPS26A-205ENST00000489656 COL15A1P39059 1388 aa17.77■□□□□ 0.43
VPS26A-205ENST00000489656 UBTFL1P0CB47 393 aaPredicted RBP17.76■□□□□ 0.43
VPS26A-205ENST00000489656 CWF19L2Q2TBE0 894 aaKnown RBP17.76■□□□□ 0.43
VPS26A-205ENST00000489656 ANKRD44Q8N8A2 993 aa17.76■□□□□ 0.43
VPS26A-205ENST00000489656 HDAC5Q9UQL6 1122 aa17.76■□□□□ 0.43
VPS26A-205ENST00000489656 TUBGCP6Q96RT7 1819 aa17.76■□□□□ 0.43
VPS26A-205ENST00000489656 LAMB2P55268 1798 aa17.76■□□□□ 0.43
VPS26A-205ENST00000489656 A0A087WZG4 1122 aa17.75■□□□□ 0.43
VPS26A-205ENST00000489656 GRM8O00222 908 aa17.75■□□□□ 0.43
VPS26A-205ENST00000489656 PLSCR1O15162 318 aa17.75■□□□□ 0.43
VPS26A-205ENST00000489656 RGL2O15211 777 aa17.75■□□□□ 0.43
VPS26A-205ENST00000489656 TRIM28Q13263 835 aaKnown RBP17.75■□□□□ 0.43
VPS26A-205ENST00000489656 GCKRQ14397 625 aa17.75■□□□□ 0.43
VPS26A-205ENST00000489656 HSP90AB3PQ58FF7 597 aa17.75■□□□□ 0.43
VPS26A-205ENST00000489656 CEP85Q6P2H3 762 aa17.75■□□□□ 0.43
VPS26A-205ENST00000489656 GIGYF2Q6Y7W6 1299 aaKnown RBP17.75■□□□□ 0.43
VPS26A-205ENST00000489656 NPM2Q86SE8 214 aaKnown RBP17.75■□□□□ 0.43
VPS26A-205ENST00000489656 SIRT2Q8IXJ6 389 aa17.75■□□□□ 0.43
VPS26A-205ENST00000489656 ISCA1Q9BUE6 129 aa17.75■□□□□ 0.43
VPS26A-205ENST00000489656 ZBTB3Q9H5J0 574 aa17.75■□□□□ 0.43
VPS26A-205ENST00000489656 CAPN15O75808 1086 aa17.74■□□□□ 0.43
VPS26A-205ENST00000489656 TCIRG1Q13488 830 aa17.74■□□□□ 0.43
VPS26A-205ENST00000489656 DZIP3Q86Y13 1208 aaKnown RBP17.74■□□□□ 0.43
VPS26A-205ENST00000489656 C9orf78Q9NZ63 289 aaPredicted RBP17.74■□□□□ 0.43
VPS26A-205ENST00000489656 ZNF330Q9Y3S2 320 aaPredicted RBP17.74■□□□□ 0.43
VPS26A-205ENST00000489656 COL24A1Q17RW2 1714 aa17.74■□□□□ 0.43
VPS26A-205ENST00000489656 CASZ1Q86V15 1759 aa17.74■□□□□ 0.43
VPS26A-205ENST00000489656 QSER1Q2KHR3 1735 aa17.73■□□□□ 0.43
VPS26A-205ENST00000489656 RPS6KA4O75676 772 aa17.73■□□□□ 0.43
VPS26A-205ENST00000489656 NBPF7P0C2Y1 421 aaPredicted RBP17.73■□□□□ 0.43
VPS26A-205ENST00000489656 ILDR1Q86SU0 546 aaPredicted RBP17.73■□□□□ 0.43
VPS26A-205ENST00000489656 SMC5Q8IY18 1101 aa17.73■□□□□ 0.43
VPS26A-205ENST00000489656 CCDC191Q8NCU4 936 aa17.73■□□□□ 0.43
VPS26A-205ENST00000489656 LRRFIP2Q9Y608 721 aaKnown RBP17.73■□□□□ 0.43
VPS26A-205ENST00000489656 CWC25Q9NXE8 425 aaPredicted RBP17.72■□□□□ 0.43
VPS26A-205ENST00000489656 CAMTA2O94983 1202 aa17.71■□□□□ 0.43
VPS26A-205ENST00000489656 KCNQ4P56696 695 aa17.71■□□□□ 0.43
VPS26A-205ENST00000489656 LRRC4BQ9NT99 713 aa17.71■□□□□ 0.43
VPS26A-205ENST00000489656 ATP5J2-PTCD1G3V325 749 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms