RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 SPATA31A5Q5VU36 1347 aa12.51□□□□□ -0.41
TNRC6B-208ENST00000489500 SPATA31A7Q8IWB4 1347 aa12.51□□□□□ -0.41
TNRC6B-208ENST00000489500 KIAA0232Q92628 1395 aa12.51□□□□□ -0.41
TNRC6B-208ENST00000489500 TONSLQ96HA7 1378 aa12.51□□□□□ -0.41
TNRC6B-208ENST00000489500 BAG6P46379 1132 aa12.5□□□□□ -0.41
TNRC6B-208ENST00000489500 AMHR2Q16671 573 aa12.5□□□□□ -0.41
TNRC6B-208ENST00000489500 CABP1Q9NZU7 370 aa12.5□□□□□ -0.41
TNRC6B-208ENST00000489500 POTECB2RU33 542 aa12.49□□□□□ -0.41
TNRC6B-208ENST00000489500 ST8SIA5O15466 376 aa12.49□□□□□ -0.41
TNRC6B-208ENST00000489500 SLC24A1O60721 1099 aa12.49□□□□□ -0.41
TNRC6B-208ENST00000489500 TRIM32Q13049 653 aa12.49□□□□□ -0.41
TNRC6B-208ENST00000489500 CHRNA2Q15822 529 aa12.49□□□□□ -0.41
TNRC6B-208ENST00000489500 CCDC24Q8N4L8 307 aa12.49□□□□□ -0.41
TNRC6B-208ENST00000489500 SPIRE2Q8WWL2 714 aa12.49□□□□□ -0.41
TNRC6B-208ENST00000489500 RGPD1P0DJD0 1748 aa12.48□□□□□ -0.41
TNRC6B-208ENST00000489500 GIGYF2Q6Y7W6 1299 aaKnown RBP12.48□□□□□ -0.41
TNRC6B-208ENST00000489500 CARD11Q9BXL7 1154 aa12.48□□□□□ -0.41
TNRC6B-208ENST00000489500 CPDO75976 1380 aa12.47□□□□□ -0.41
TNRC6B-208ENST00000489500 SPATA31A1Q5TZJ5 1347 aa12.47□□□□□ -0.41
TNRC6B-208ENST00000489500 C11orf95C9JLR9 678 aaPredicted RBP12.47□□□□□ -0.41
TNRC6B-208ENST00000489500 GCP02774 474 aa12.47□□□□□ -0.41
TNRC6B-208ENST00000489500 FDX1P10109 184 aa12.47□□□□□ -0.41
TNRC6B-208ENST00000489500 NDUFV2P19404 249 aa12.47□□□□□ -0.41
TNRC6B-208ENST00000489500 TRIM26Q12899 539 aaPredicted RBP12.47□□□□□ -0.41
TNRC6B-208ENST00000489500 PDE3BQ13370 1112 aa12.47□□□□□ -0.41
TNRC6B-208ENST00000489500 CYP4X1Q8N118 509 aa12.47□□□□□ -0.41
TNRC6B-208ENST00000489500 AAASQ9NRG9 546 aa12.47□□□□□ -0.41
TNRC6B-208ENST00000489500 THRAP3Q9Y2W1 955 aaKnown RBP12.47□□□□□ -0.41
TNRC6B-208ENST00000489500 USP6P35125 1406 aa12.46□□□□□ -0.41
TNRC6B-208ENST00000489500 USP19O94966 1318 aa12.46□□□□□ -0.41
TNRC6B-208ENST00000489500 ZBTB7CA1YPR0 619 aa12.46□□□□□ -0.41
TNRC6B-208ENST00000489500 KCNH5Q8NCM2 988 aa12.46□□□□□ -0.41
TNRC6B-208ENST00000489500 NRKQ7Z2Y5 1582 aa12.46□□□□□ -0.42
TNRC6B-208ENST00000489500 AKAP12Q02952 1782 aa12.46□□□□□ -0.42
TNRC6B-208ENST00000489500 TTC21AQ8NDW8 1320 aa12.45□□□□□ -0.42
TNRC6B-208ENST00000489500 JUNDP17535 347 aa12.45□□□□□ -0.42
TNRC6B-208ENST00000489500 FAM196AQ6ZSG2 479 aa12.45□□□□□ -0.42
TNRC6B-208ENST00000489500 TCP11L2Q8N4U5 519 aa12.45□□□□□ -0.42
TNRC6B-208ENST00000489500 USP35Q9P2H5 1018 aa12.45□□□□□ -0.42
TNRC6B-208ENST00000489500 SSH2Q76I76 1423 aa12.45□□□□□ -0.42
TNRC6B-208ENST00000489500 MOXD2PA6NHM9 499 aa12.44□□□□□ -0.42
TNRC6B-208ENST00000489500 WNT7AO00755 349 aa12.44□□□□□ -0.42
TNRC6B-208ENST00000489500 RETREG3Q86VR2 466 aa12.44□□□□□ -0.42
TNRC6B-208ENST00000489500 THSD7AQ9UPZ6 1657 aa12.44□□□□□ -0.42
TNRC6B-208ENST00000489500 HDGFL2Q7Z4V5 671 aaPredicted RBP12.43□□□□□ -0.42
TNRC6B-208ENST00000489500 DEFB132Q7Z7B7 95 aa12.43□□□□□ -0.42
TNRC6B-208ENST00000489500 KTN1Q86UP2 1357 aaKnown RBP12.43□□□□□ -0.42
TNRC6B-208ENST00000489500 SBNO2Q9Y2G9 1366 aa12.43□□□□□ -0.42
TNRC6B-208ENST00000489500 C6orf229H3BNL8 230 aa12.42□□□□□ -0.42
TNRC6B-208ENST00000489500 TRIM66O15016 1216 aa12.42□□□□□ -0.42
TNRC6B-208ENST00000489500 CAMTA1Q9Y6Y1 1673 aa12.42□□□□□ -0.42
TNRC6B-208ENST00000489500 TTC21BQ7Z4L5 1316 aa12.41□□□□□ -0.42
TNRC6B-208ENST00000489500 TTC24A2A3L6 582 aaPredicted RBP12.41□□□□□ -0.42
TNRC6B-208ENST00000489500 CRB1P82279 1406 aa12.41□□□□□ -0.42
TNRC6B-208ENST00000489500 SKOR1P84550 965 aa12.41□□□□□ -0.42
TNRC6B-208ENST00000489500 LARP1Q6PKG0 1096 aaKnown RBP12.41□□□□□ -0.42
TNRC6B-208ENST00000489500 PARP9Q8IXQ6 854 aa12.41□□□□□ -0.42
TNRC6B-208ENST00000489500 TMC1Q8TDI8 760 aa12.41□□□□□ -0.42
TNRC6B-208ENST00000489500 MRGPRX2Q96LB1 330 aa12.41□□□□□ -0.42
TNRC6B-208ENST00000489500 BEGAINQ9BUH8 593 aa12.41□□□□□ -0.42
TNRC6B-208ENST00000489500 TERF2IPQ9NYB0 399 aa12.41□□□□□ -0.42
TNRC6B-208ENST00000489500 DACH1Q9UI36 760 aa12.41□□□□□ -0.42
TNRC6B-208ENST00000489500 LMO7Q8WWI1 1683 aa12.41□□□□□ -0.42
TNRC6B-208ENST00000489500 AATKQ6ZMQ8 1374 aa12.41□□□□□ -0.42
TNRC6B-208ENST00000489500 AVPP01185 164 aa12.4□□□□□ -0.42
TNRC6B-208ENST00000489500 CSB-PGBD3P0DP91 1061 aa12.4□□□□□ -0.42
TNRC6B-208ENST00000489500 PTCRAQ6ISU1 281 aaPredicted RBP12.4□□□□□ -0.42
TNRC6B-208ENST00000489500 TOM1L2Q6ZVM7 507 aa12.4□□□□□ -0.42
TNRC6B-208ENST00000489500 ZNF775Q96BV0 537 aaPredicted RBP12.4□□□□□ -0.42
TNRC6B-208ENST00000489500 PUS7Q96PZ0 661 aaKnown RBP12.4□□□□□ -0.42
TNRC6B-208ENST00000489500 CDCA7Q9BWT1 371 aaPredicted RBP12.4□□□□□ -0.42
TNRC6B-208ENST00000489500 SLIT3O75094 1523 aa12.4□□□□□ -0.42
TNRC6B-208ENST00000489500 EP400Q96L91 3159 aa12.4□□□□□ -0.42
TNRC6B-208ENST00000489500 MON2Q7Z3U7 1717 aa12.4□□□□□ -0.43
TNRC6B-208ENST00000489500 PIK3C2AO00443 1686 aa12.39□□□□□ -0.43
TNRC6B-208ENST00000489500 COL5A2P05997 1499 aaPredicted RBP12.39□□□□□ -0.43
TNRC6B-208ENST00000489500 PARP4Q9UKK3 1724 aaKnown RBP12.38□□□□□ -0.43
TNRC6B-208ENST00000489500 TRIM37O94972 964 aa12.38□□□□□ -0.43
TNRC6B-208ENST00000489500 APBA3O96018 575 aa12.38□□□□□ -0.43
TNRC6B-208ENST00000489500 MS4A1P11836 297 aa12.38□□□□□ -0.43
TNRC6B-208ENST00000489500 SMPD1P17405 629 aa12.38□□□□□ -0.43
TNRC6B-208ENST00000489500 CRIPAKQ8N1N5 446 aa12.38□□□□□ -0.43
TNRC6B-208ENST00000489500 SNIP1Q8TAD8 396 aaKnown RBP12.38□□□□□ -0.43
TNRC6B-208ENST00000489500 AK7Q96M32 723 aa12.38□□□□□ -0.43
TNRC6B-208ENST00000489500 NUDT12Q9BQG2 462 aa12.38□□□□□ -0.43
TNRC6B-208ENST00000489500 PARD3Q8TEW0 1356 aa12.38□□□□□ -0.43
TNRC6B-208ENST00000489500 CPSF1Q10570 1443 aaKnown RBP12.37□□□□□ -0.43
TNRC6B-208ENST00000489500 FAM182BQ5T319 152 aa12.37□□□□□ -0.43
TNRC6B-208ENST00000489500 RC3H1Q5TC82 1133 aaKnown RBP12.37□□□□□ -0.43
TNRC6B-208ENST00000489500 NBPF14Q5TI25 921 aa12.37□□□□□ -0.43
TNRC6B-208ENST00000489500 NINLQ9Y2I6 1382 aa12.37□□□□□ -0.43
TNRC6B-208ENST00000489500 RGPD5Q99666 1765 aa12.37□□□□□ -0.43
TNRC6B-208ENST00000489500 TNS1Q9HBL0 1735 aaKnown RBP12.37□□□□□ -0.43
TNRC6B-208ENST00000489500 WDR17Q8IZU2 1322 aa12.37□□□□□ -0.43
TNRC6B-208ENST00000489500 J3QL48 77 aa12.36□□□□□ -0.43
TNRC6B-208ENST00000489500 DDB1Q16531 1140 aa12.36□□□□□ -0.43
TNRC6B-208ENST00000489500 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.36□□□□□ -0.43
TNRC6B-208ENST00000489500 TBC1D2Q9BYX2 928 aa12.36□□□□□ -0.43
TNRC6B-208ENST00000489500 DISP2A7MBM2 1401 aa12.36□□□□□ -0.43
TNRC6B-208ENST00000489500 ARHGEF25Q86VW2 580 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms