RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 KIF23Q02241 960 aaPredicted RBP11.19□□□□□ -0.62
EXOSC3-206ENST00000489414 RC3H1Q5TC82 1133 aaKnown RBP11.19□□□□□ -0.62
EXOSC3-206ENST00000489414 BICDL1Q6ZP65 573 aa11.19□□□□□ -0.62
EXOSC3-206ENST00000489414 ZNF296Q8WUU4 475 aaPredicted RBP11.19□□□□□ -0.62
EXOSC3-206ENST00000489414 SRP68Q9UHB9 627 aaKnown RBP11.19□□□□□ -0.62
EXOSC3-206ENST00000489414 CD163L1Q9NR16 1453 aa11.19□□□□□ -0.62
EXOSC3-206ENST00000489414 CGNL1Q0VF96 1302 aa11.18□□□□□ -0.62
EXOSC3-206ENST00000489414 CNTNAP4Q9C0A0 1308 aa11.18□□□□□ -0.62
EXOSC3-206ENST00000489414 H0YIN7 160 aa11.18□□□□□ -0.62
EXOSC3-206ENST00000489414 SRPK2P78362 688 aaKnown RBP11.18□□□□□ -0.62
EXOSC3-206ENST00000489414 GPR153Q6NV75 609 aa11.18□□□□□ -0.62
EXOSC3-206ENST00000489414 BCORQ6W2J9 1755 aa11.18□□□□□ -0.62
EXOSC3-206ENST00000489414 PCDH11XQ9BZA7 1347 aa11.17□□□□□ -0.62
EXOSC3-206ENST00000489414 PCDH11YQ9BZA8 1340 aa11.17□□□□□ -0.62
EXOSC3-206ENST00000489414 A0A1W2PPC1 479 aa11.17□□□□□ -0.62
EXOSC3-206ENST00000489414 GPC2Q8N158 579 aa11.17□□□□□ -0.62
EXOSC3-206ENST00000489414 DEFB123Q8N688 67 aa11.17□□□□□ -0.62
EXOSC3-206ENST00000489414 COL11A2P13942 1736 aaPredicted RBP11.17□□□□□ -0.62
EXOSC3-206ENST00000489414 MAP3K19Q56UN5 1328 aa11.16□□□□□ -0.62
EXOSC3-206ENST00000489414 CSRNP1Q96S65 589 aa11.16□□□□□ -0.62
EXOSC3-206ENST00000489414 ASAP1Q9ULH1 1129 aa11.16□□□□□ -0.62
EXOSC3-206ENST00000489414 CARMIL3Q8ND23 1372 aa11.16□□□□□ -0.62
EXOSC3-206ENST00000489414 SLX4Q8IY92 1834 aa11.15□□□□□ -0.62
EXOSC3-206ENST00000489414 FZD9O00144 591 aa11.15□□□□□ -0.62
EXOSC3-206ENST00000489414 HUNKP57058 714 aa11.15□□□□□ -0.62
EXOSC3-206ENST00000489414 USP50Q70EL3 339 aaPredicted RBP11.15□□□□□ -0.62
EXOSC3-206ENST00000489414 CACNA1SQ13698 1873 aa11.15□□□□□ -0.63
EXOSC3-206ENST00000489414 ANKRD31Q8N7Z5 1873 aa11.15□□□□□ -0.63
EXOSC3-206ENST00000489414 ARFGEF2Q9Y6D5 1785 aa11.14□□□□□ -0.63
EXOSC3-206ENST00000489414 RGMBQ6NW40 437 aa11.14□□□□□ -0.63
EXOSC3-206ENST00000489414 LTV1Q96GA3 475 aaPredicted RBP11.14□□□□□ -0.63
EXOSC3-206ENST00000489414 CYP27B1O15528 508 aa11.13□□□□□ -0.63
EXOSC3-206ENST00000489414 ITGAEP38570 1179 aa11.13□□□□□ -0.63
EXOSC3-206ENST00000489414 SCNN1DP51172 638 aa11.13□□□□□ -0.63
EXOSC3-206ENST00000489414 Q7L0L9 218 aa11.13□□□□□ -0.63
EXOSC3-206ENST00000489414 IP6K1Q92551 441 aa11.13□□□□□ -0.63
EXOSC3-206ENST00000489414 CCDC102AQ96A19 550 aa11.13□□□□□ -0.63
EXOSC3-206ENST00000489414 SLC4A9Q96Q91 983 aa11.13□□□□□ -0.63
EXOSC3-206ENST00000489414 ZNF408Q9H9D4 720 aa11.13□□□□□ -0.63
EXOSC3-206ENST00000489414 MTMR10Q9NXD2 777 aa11.13□□□□□ -0.63
EXOSC3-206ENST00000489414 ZBTB22O15209 634 aa11.12□□□□□ -0.63
EXOSC3-206ENST00000489414 LMOD1P29536 600 aaPredicted RBP11.12□□□□□ -0.63
EXOSC3-206ENST00000489414 EPS15P42566 896 aa11.12□□□□□ -0.63
EXOSC3-206ENST00000489414 MAP3K12Q12852 859 aa11.12□□□□□ -0.63
EXOSC3-206ENST00000489414 NOM1Q5C9Z4 860 aaKnown RBP11.12□□□□□ -0.63
EXOSC3-206ENST00000489414 SOGA3Q5TF21 947 aa11.12□□□□□ -0.63
EXOSC3-206ENST00000489414 ZNF622Q969S3 477 aaKnown RBP eCLIP11.12□□□□□ -0.63
EXOSC3-206ENST00000489414 GLIS2Q9BZE0 524 aaPredicted RBP11.12□□□□□ -0.63
EXOSC3-206ENST00000489414 MON2Q7Z3U7 1717 aa11.12□□□□□ -0.63
EXOSC3-206ENST00000489414 ZNF692Q9BU19 519 aaPredicted RBP11.11□□□□□ -0.63
EXOSC3-206ENST00000489414 TMEM265A0A087WTH1 108 aa11.1□□□□□ -0.63
EXOSC3-206ENST00000489414 NFIXQ14938 502 aa11.1□□□□□ -0.63
EXOSC3-206ENST00000489414 ATG3Q9NT62 314 aa11.1□□□□□ -0.63
EXOSC3-206ENST00000489414 GPR25O00155 361 aa11.09□□□□□ -0.63
EXOSC3-206ENST00000489414 PPEF1O14829 653 aaPredicted RBP11.09□□□□□ -0.63
EXOSC3-206ENST00000489414 ZNF277Q9NRM2 450 aaPredicted RBP11.09□□□□□ -0.63
EXOSC3-206ENST00000489414 TBC1D8O95759 1140 aa11.08□□□□□ -0.64
EXOSC3-206ENST00000489414 SERPINB2P05120 415 aa11.08□□□□□ -0.64
EXOSC3-206ENST00000489414 SLC10A3P09131 477 aa11.08□□□□□ -0.64
EXOSC3-206ENST00000489414 NKX1-1Q15270 411 aaPredicted RBP11.08□□□□□ -0.64
EXOSC3-206ENST00000489414 RAPGEF4Q8WZA2 1011 aa11.08□□□□□ -0.64
EXOSC3-206ENST00000489414 ARMC5Q96C12 935 aa11.08□□□□□ -0.64
EXOSC3-206ENST00000489414 TMOD3Q9NYL9 352 aa11.08□□□□□ -0.64
EXOSC3-206ENST00000489414 PDZRN3Q9UPQ7 1066 aa11.08□□□□□ -0.64
EXOSC3-206ENST00000489414 ARIH1Q9Y4X5 557 aaPredicted RBP11.08□□□□□ -0.64
EXOSC3-206ENST00000489414 ZNF157P51786 506 aaPredicted RBP11.07□□□□□ -0.64
EXOSC3-206ENST00000489414 FKBP4Q02790 459 aaKnown RBP eCLIP11.07□□□□□ -0.64
EXOSC3-206ENST00000489414 EVX2Q03828 476 aa11.07□□□□□ -0.64
EXOSC3-206ENST00000489414 PRPF40BQ6NWY9 871 aaKnown RBP11.07□□□□□ -0.64
EXOSC3-206ENST00000489414 PGAP2Q9UHJ9 254 aa11.07□□□□□ -0.64
EXOSC3-206ENST00000489414 TNFRSF10AO00220 468 aa11.06□□□□□ -0.64
EXOSC3-206ENST00000489414 SYMPKQ92797 1274 aaKnown RBP11.06□□□□□ -0.64
EXOSC3-206ENST00000489414 TATP17735 454 aaPredicted RBP11.05□□□□□ -0.64
EXOSC3-206ENST00000489414 NBPF6Q5VWK0 638 aa11.05□□□□□ -0.64
EXOSC3-206ENST00000489414 USPL1Q5W0Q7 1092 aa11.05□□□□□ -0.64
EXOSC3-206ENST00000489414 C7orf43Q8WVR3 580 aa11.05□□□□□ -0.64
EXOSC3-206ENST00000489414 NBPF4Q96M43 638 aa11.05□□□□□ -0.64
EXOSC3-206ENST00000489414 GJA3Q9Y6H8 435 aa11.05□□□□□ -0.64
EXOSC3-206ENST00000489414 RPTORQ8N122 1335 aa11.05□□□□□ -0.64
EXOSC3-206ENST00000489414 FKTNO75072 461 aa11.04□□□□□ -0.64
EXOSC3-206ENST00000489414 CCDC93Q567U6 631 aa11.04□□□□□ -0.64
EXOSC3-206ENST00000489414 USHBP1Q8N6Y0 703 aa11.04□□□□□ -0.64
EXOSC3-206ENST00000489414 CNKSR1Q969H4 720 aa11.04□□□□□ -0.64
EXOSC3-206ENST00000489414 ADARB2Q9NS39 739 aaKnown RBP11.04□□□□□ -0.64
EXOSC3-206ENST00000489414 COL4A5P29400 1685 aa11.04□□□□□ -0.64
EXOSC3-206ENST00000489414 ZPR1O75312 459 aa11.03□□□□□ -0.64
EXOSC3-206ENST00000489414 PDE6BP35913 854 aa11.03□□□□□ -0.64
EXOSC3-206ENST00000489414 IARSP41252 1262 aaKnown RBP11.03□□□□□ -0.64
EXOSC3-206ENST00000489414 CRKLP46109 303 aaKnown RBP11.03□□□□□ -0.64
EXOSC3-206ENST00000489414 CDC37L1Q7L3B6 337 aa11.03□□□□□ -0.64
EXOSC3-206ENST00000489414 TMEM106CQ9BVX2 250 aa11.03□□□□□ -0.64
EXOSC3-206ENST00000489414 ANKRD26Q9UPS8 1709 aa11.03□□□□□ -0.64
EXOSC3-206ENST00000489414 CDH23Q9H251 3354 aa11.03□□□□□ -0.64
EXOSC3-206ENST00000489414 KTN1Q86UP2 1357 aaKnown RBP11.03□□□□□ -0.64
EXOSC3-206ENST00000489414 PKD1L2Q7Z442 2459 aa11.02□□□□□ -0.64
EXOSC3-206ENST00000489414 SPDYE2BA6NHP3 402 aa11.02□□□□□ -0.65
EXOSC3-206ENST00000489414 SPDYE6P0CI01 402 aa11.02□□□□□ -0.65
EXOSC3-206ENST00000489414 HOXC9P31274 260 aa11.02□□□□□ -0.65
EXOSC3-206ENST00000489414 SPDYE2Q495Y8 402 aa11.02□□□□□ -0.65
EXOSC3-206ENST00000489414 OTOP1Q7RTM1 612 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms