RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 KIF20BQ96Q89 1820 aa21.02■□□□□ 0.96
UFD1-209ENST00000489406 PLEKHO1Q53GL0 409 aaPredicted RBP21.02■□□□□ 0.96
UFD1-209ENST00000489406 TESK2Q96S53 571 aa21.02■□□□□ 0.96
UFD1-209ENST00000489406 CACNA1SQ13698 1873 aa21.02■□□□□ 0.96
UFD1-209ENST00000489406 CIAPIN1Q6FI81 312 aa21.01■□□□□ 0.95
UFD1-209ENST00000489406 STYK1Q6J9G0 422 aa21.01■□□□□ 0.95
UFD1-209ENST00000489406 TBC1D9BQ66K14 1250 aa21■□□□□ 0.95
UFD1-209ENST00000489406 GCC1Q96CN9 775 aa21■□□□□ 0.95
UFD1-209ENST00000489406 FKBP4Q02790 459 aaKnown RBP eCLIP20.99■□□□□ 0.95
UFD1-209ENST00000489406 CCDC93Q567U6 631 aa20.99■□□□□ 0.95
UFD1-209ENST00000489406 GPC2Q8N158 579 aa20.99■□□□□ 0.95
UFD1-209ENST00000489406 SRGNP10124 158 aa20.98■□□□□ 0.95
UFD1-209ENST00000489406 EIF4A2Q14240 407 aaKnown RBP20.98■□□□□ 0.95
UFD1-209ENST00000489406 C7orf43Q8WVR3 580 aa20.98■□□□□ 0.95
UFD1-209ENST00000489406 TRPM7Q96QT4 1865 aa20.97■□□□□ 0.95
UFD1-209ENST00000489406 FZD9O00144 591 aa20.97■□□□□ 0.95
UFD1-209ENST00000489406 SAPCD2Q86UD0 394 aa20.97■□□□□ 0.95
UFD1-209ENST00000489406 MASTLQ96GX5 879 aa20.97■□□□□ 0.95
UFD1-209ENST00000489406 ANKRD26Q9UPS8 1709 aa20.97■□□□□ 0.95
UFD1-209ENST00000489406 CANXP27824 592 aaKnown RBP20.96■□□□□ 0.95
UFD1-209ENST00000489406 HABP4Q5JVS0 413 aaKnown RBP20.96■□□□□ 0.95
UFD1-209ENST00000489406 C1orf141Q5JVX7 400 aa20.96■□□□□ 0.95
UFD1-209ENST00000489406 GJA3Q9Y6H8 435 aa20.96■□□□□ 0.95
UFD1-209ENST00000489406 NPHP1O15259 732 aa20.95■□□□□ 0.94
UFD1-209ENST00000489406 LMOD1P29536 600 aaPredicted RBP20.95■□□□□ 0.94
UFD1-209ENST00000489406 AMOTQ4VCS5 1084 aa20.95■□□□□ 0.94
UFD1-209ENST00000489406 OLFM4Q6UX06 510 aa20.95■□□□□ 0.94
UFD1-209ENST00000489406 NBPF15Q8N660 670 aa20.95■□□□□ 0.94
UFD1-209ENST00000489406 ZIC5Q96T25 663 aa20.94■□□□□ 0.94
UFD1-209ENST00000489406 CELF2O95319 508 aaKnown RBP20.93■□□□□ 0.94
UFD1-209ENST00000489406 IARSP41252 1262 aaKnown RBP20.93■□□□□ 0.94
UFD1-209ENST00000489406 EPS15P42566 896 aa20.93■□□□□ 0.94
UFD1-209ENST00000489406 CNBD1Q8NA66 436 aa20.93■□□□□ 0.94
UFD1-209ENST00000489406 POLKQ9UBT6 870 aa20.93■□□□□ 0.94
UFD1-209ENST00000489406 ARFGEF2Q9Y6D5 1785 aa20.92■□□□□ 0.94
UFD1-209ENST00000489406 SLC39A6Q13433 755 aa20.91■□□□□ 0.94
UFD1-209ENST00000489406 HHIPL1Q96JK4 782 aa20.91■□□□□ 0.94
UFD1-209ENST00000489406 ST5P78524 1137 aa20.9■□□□□ 0.94
UFD1-209ENST00000489406 SYNE4Q8N205 404 aa20.9■□□□□ 0.94
UFD1-209ENST00000489406 CARD14Q9BXL6 1004 aa20.9■□□□□ 0.94
UFD1-209ENST00000489406 A0A087WZG4 1122 aa20.89■□□□□ 0.93
UFD1-209ENST00000489406 SCNN1DP51172 638 aa20.89■□□□□ 0.93
UFD1-209ENST00000489406 EIF5P55010 431 aaKnown RBP20.89■□□□□ 0.93
UFD1-209ENST00000489406 EIF6P56537 245 aaKnown RBP20.89■□□□□ 0.93
UFD1-209ENST00000489406 USP50Q70EL3 339 aaPredicted RBP20.89■□□□□ 0.93
UFD1-209ENST00000489406 RTKN2Q8IZC4 609 aa20.89■□□□□ 0.93
UFD1-209ENST00000489406 JDP2Q8WYK2 163 aa20.89■□□□□ 0.93
UFD1-209ENST00000489406 TBC1D2BQ9UPU7 963 aa20.89■□□□□ 0.93
UFD1-209ENST00000489406 SLC24A1O60721 1099 aa20.88■□□□□ 0.93
UFD1-209ENST00000489406 NOGQ13253 232 aa20.88■□□□□ 0.93
UFD1-209ENST00000489406 SETDB2Q96T68 719 aa20.88■□□□□ 0.93
UFD1-209ENST00000489406 ZNF408Q9H9D4 720 aa20.87■□□□□ 0.93
UFD1-209ENST00000489406 SLC52A2Q9HAB3 445 aa20.86■□□□□ 0.93
UFD1-209ENST00000489406 ZNF330Q9Y3S2 320 aaPredicted RBP20.86■□□□□ 0.93
UFD1-209ENST00000489406 GLIS2Q9BZE0 524 aaPredicted RBP20.85■□□□□ 0.93
UFD1-209ENST00000489406 HPS5Q9UPZ3 1129 aa20.85■□□□□ 0.93
UFD1-209ENST00000489406 NPR1P16066 1061 aa20.84■□□□□ 0.93
UFD1-209ENST00000489406 CTU1Q7Z7A3 348 aaKnown RBP20.84■□□□□ 0.93
UFD1-209ENST00000489406 AEBP1Q8IUX7 1158 aa20.84■□□□□ 0.93
UFD1-209ENST00000489406 TNNT2P45379 298 aaPredicted RBP20.83■□□□□ 0.93
UFD1-209ENST00000489406 LGR6Q9HBX8 967 aa20.83■□□□□ 0.93
UFD1-209ENST00000489406 SCN11AQ9UI33 1791 aa20.82■□□□□ 0.92
UFD1-209ENST00000489406 TRPA1O75762 1119 aa20.82■□□□□ 0.92
UFD1-209ENST00000489406 VSIG10Q8N0Z9 540 aa20.82■□□□□ 0.92
UFD1-209ENST00000489406 SAGE1Q9NXZ1 904 aa20.82■□□□□ 0.92
UFD1-209ENST00000489406 SCN7AQ01118 1682 aa20.81■□□□□ 0.92
UFD1-209ENST00000489406 STARD3NLO95772 234 aa20.81■□□□□ 0.92
UFD1-209ENST00000489406 FXR1P51114 621 aaKnown RBP eCLIP20.81■□□□□ 0.92
UFD1-209ENST00000489406 AKAP4Q5JQC9 854 aa20.81■□□□□ 0.92
UFD1-209ENST00000489406 COL4A5P29400 1685 aa20.8■□□□□ 0.92
UFD1-209ENST00000489406 RNF186Q9NXI6 227 aa20.8■□□□□ 0.92
UFD1-209ENST00000489406 HUNKP57058 714 aa20.79■□□□□ 0.92
UFD1-209ENST00000489406 ADARB2Q9NS39 739 aaKnown RBP20.79■□□□□ 0.92
UFD1-209ENST00000489406 BCORQ6W2J9 1755 aa20.79■□□□□ 0.92
UFD1-209ENST00000489406 DLL1O00548 723 aa20.78■□□□□ 0.92
UFD1-209ENST00000489406 KIF23Q02241 960 aaPredicted RBP20.78■□□□□ 0.92
UFD1-209ENST00000489406 NBPF5PQ86XG9 351 aaPredicted RBP20.78■□□□□ 0.92
UFD1-209ENST00000489406 PSMD1Q99460 953 aa20.78■□□□□ 0.92
UFD1-209ENST00000489406 CAMTA2O94983 1202 aa20.77■□□□□ 0.92
UFD1-209ENST00000489406 FAM155AB1AL88 458 aaPredicted RBP20.76■□□□□ 0.91
UFD1-209ENST00000489406 LARGE2Q8N3Y3 721 aa20.76■□□□□ 0.91
UFD1-209ENST00000489406 GPRC5DQ9NZD1 345 aa20.76■□□□□ 0.91
UFD1-209ENST00000489406 KLRG2A4D1S0 409 aaPredicted RBP20.75■□□□□ 0.91
UFD1-209ENST00000489406 RNMTO43148 476 aaKnown RBP20.75■□□□□ 0.91
UFD1-209ENST00000489406 ALDH1B1P30837 517 aa20.74■□□□□ 0.91
UFD1-209ENST00000489406 IL6STP40189 918 aaPredicted RBP20.74■□□□□ 0.91
UFD1-209ENST00000489406 SULT6B1Q6IMI4 303 aa20.74■□□□□ 0.91
UFD1-209ENST00000489406 SNED1Q8TER0 1413 aa20.73■□□□□ 0.91
UFD1-209ENST00000489406 RGMBQ6NW40 437 aa20.73■□□□□ 0.91
UFD1-209ENST00000489406 NPM2Q86SE8 214 aaKnown RBP20.73■□□□□ 0.91
UFD1-209ENST00000489406 PGAP2Q9UHJ9 254 aa20.73■□□□□ 0.91
UFD1-209ENST00000489406 CDC37L1Q7L3B6 337 aa20.72■□□□□ 0.91
UFD1-209ENST00000489406 MRC1P22897 1456 aa20.72■□□□□ 0.91
UFD1-209ENST00000489406 DLK2Q6UY11 383 aa20.71■□□□□ 0.91
UFD1-209ENST00000489406 PKN2Q16513 984 aaKnown RBP20.7■□□□□ 0.9
UFD1-209ENST00000489406 DZIP3Q86Y13 1208 aaKnown RBP20.7■□□□□ 0.9
UFD1-209ENST00000489406 NIM1KQ8IY84 436 aa20.7■□□□□ 0.9
UFD1-209ENST00000489406 TTC5Q8N0Z6 440 aa20.7■□□□□ 0.9
UFD1-209ENST00000489406 CCDC102AQ96A19 550 aa20.7■□□□□ 0.9
UFD1-209ENST00000489406 A1BGP04217 495 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms