RNA–Protein interactions for RNA: ENST00000489302.5

PDZD8-203, Transcript of PDZ domain containing 8, humanhuman

TSL 3

Gene PDZD8, Length 740 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-203ENST00000489302 PRR5LQ6MZQ0 368 aa13.32□□□□□ -0.28
PDZD8-203ENST00000489302 ARHGAP27Q6ZUM4 889 aa13.32□□□□□ -0.28
PDZD8-203ENST00000489302 ZNF784Q8NCA9 323 aaPredicted RBP13.32□□□□□ -0.28
PDZD8-203ENST00000489302 RNF39Q9H2S5 420 aa13.32□□□□□ -0.28
PDZD8-203ENST00000489302 ZNF652Q9Y2D9 606 aa13.32□□□□□ -0.28
PDZD8-203ENST00000489302 AFDNP55196 1824 aaKnown RBP13.32□□□□□ -0.28
PDZD8-203ENST00000489302 CARMIL3Q8ND23 1372 aa13.32□□□□□ -0.28
PDZD8-203ENST00000489302 CHD4Q14839 1912 aa13.31□□□□□ -0.28
PDZD8-203ENST00000489302 DALRD3Q5D0E6 543 aaKnown RBP13.31□□□□□ -0.28
PDZD8-203ENST00000489302 CLEC4GQ6UXB4 293 aa13.31□□□□□ -0.28
PDZD8-203ENST00000489302 C2CD5Q86YS7 1000 aa13.31□□□□□ -0.28
PDZD8-203ENST00000489302 ZBTB3Q9H5J0 574 aa13.31□□□□□ -0.28
PDZD8-203ENST00000489302 NIP7Q9Y221 180 aaKnown RBP eCLIP13.31□□□□□ -0.28
PDZD8-203ENST00000489302 SALL2Q9Y467 1007 aaPredicted RBP13.31□□□□□ -0.28
PDZD8-203ENST00000489302 KIAA1551Q9HCM1 1747 aa13.3□□□□□ -0.28
PDZD8-203ENST00000489302 H0YIN7 160 aa13.3□□□□□ -0.28
PDZD8-203ENST00000489302 AIMP1Q12904 312 aaKnown RBP13.3□□□□□ -0.28
PDZD8-203ENST00000489302 PROSER3Q2NL68 480 aa13.3□□□□□ -0.28
PDZD8-203ENST00000489302 KIF6Q6ZMV9 814 aa13.3□□□□□ -0.28
PDZD8-203ENST00000489302 NBPF5PQ86XG9 351 aaPredicted RBP13.3□□□□□ -0.28
PDZD8-203ENST00000489302 FAM9BQ8IZU0 186 aa13.3□□□□□ -0.28
PDZD8-203ENST00000489302 CNBD1Q8NA66 436 aa13.3□□□□□ -0.28
PDZD8-203ENST00000489302 CFAP44Q96MT7 982 aa13.3□□□□□ -0.28
PDZD8-203ENST00000489302 MBIPQ9NS73 344 aa13.3□□□□□ -0.28
PDZD8-203ENST00000489302 SCN7AQ01118 1682 aa13.3□□□□□ -0.28
PDZD8-203ENST00000489302 LAMB4A4D0S4 1761 aa13.3□□□□□ -0.28
PDZD8-203ENST00000489302 ELL2O00472 640 aaPredicted RBP13.29□□□□□ -0.28
PDZD8-203ENST00000489302 GPTP24298 496 aa13.29□□□□□ -0.28
PDZD8-203ENST00000489302 PDIA6Q15084 440 aa13.29□□□□□ -0.28
PDZD8-203ENST00000489302 ZNF622Q969S3 477 aaKnown RBP eCLIP13.29□□□□□ -0.28
PDZD8-203ENST00000489302 PDE6BP35913 854 aa13.28□□□□□ -0.28
PDZD8-203ENST00000489302 ST5P78524 1137 aa13.28□□□□□ -0.28
PDZD8-203ENST00000489302 BRIP1Q9BX63 1249 aa13.28□□□□□ -0.28
PDZD8-203ENST00000489302 ZNF219Q9P2Y4 722 aaPredicted RBP13.28□□□□□ -0.28
PDZD8-203ENST00000489302 MAP3K15Q6ZN16 1313 aa13.28□□□□□ -0.28
PDZD8-203ENST00000489302 NRXN2Q9P2S2 1712 aa13.27□□□□□ -0.28
PDZD8-203ENST00000489302 ERVV-1B6SEH8 477 aa13.27□□□□□ -0.29
PDZD8-203ENST00000489302 ZNF853P0CG23 659 aa13.27□□□□□ -0.29
PDZD8-203ENST00000489302 GTF2E1P29083 439 aaPredicted RBP13.27□□□□□ -0.29
PDZD8-203ENST00000489302 GNAI1P63096 354 aa13.27□□□□□ -0.29
PDZD8-203ENST00000489302 CALD1Q05682 793 aaKnown RBP13.27□□□□□ -0.29
PDZD8-203ENST00000489302 HDGFL1Q5TGJ6 251 aa13.27□□□□□ -0.29
PDZD8-203ENST00000489302 DUSP27Q5VZP5 1158 aa13.27□□□□□ -0.29
PDZD8-203ENST00000489302 TPTE2Q6XPS3 522 aa13.27□□□□□ -0.29
PDZD8-203ENST00000489302 COPS6Q7L5N1 327 aa13.27□□□□□ -0.29
PDZD8-203ENST00000489302 TTLL6Q8N841 843 aa13.27□□□□□ -0.29
PDZD8-203ENST00000489302 ZNF526Q8TF50 670 aaPredicted RBP13.27□□□□□ -0.29
PDZD8-203ENST00000489302 IFT57Q9NWB7 429 aa13.27□□□□□ -0.29
PDZD8-203ENST00000489302 CHPF2Q9P2E5 772 aa13.27□□□□□ -0.29
PDZD8-203ENST00000489302 ERBB4Q15303 1308 aa13.27□□□□□ -0.29
PDZD8-203ENST00000489302 BCORQ6W2J9 1755 aa13.27□□□□□ -0.29
PDZD8-203ENST00000489302 XAGE3Q8WTP9 111 aa13.26□□□□□ -0.29
PDZD8-203ENST00000489302 LRP10Q7Z4F1 713 aa13.25□□□□□ -0.29
PDZD8-203ENST00000489302 NUTM1Q86Y26 1132 aa13.25□□□□□ -0.29
PDZD8-203ENST00000489302 WWC1Q8IX03 1113 aa13.25□□□□□ -0.29
PDZD8-203ENST00000489302 TSR2Q969E8 191 aaKnown RBP13.25□□□□□ -0.29
PDZD8-203ENST00000489302 ZNF428Q96B54 188 aa13.25□□□□□ -0.29
PDZD8-203ENST00000489302 DDX21Q9NR30 783 aaKnown RBP eCLIP13.25□□□□□ -0.29
PDZD8-203ENST00000489302 SUSD4Q5VX71 490 aa13.24□□□□□ -0.29
PDZD8-203ENST00000489302 GIGYF2Q6Y7W6 1299 aaKnown RBP13.24□□□□□ -0.29
PDZD8-203ENST00000489302 C8orf58Q8NAV2 365 aa13.24□□□□□ -0.29
PDZD8-203ENST00000489302 BRCA1P38398 1863 aaKnown RBP13.24□□□□□ -0.29
PDZD8-203ENST00000489302 ANKRD31Q8N7Z5 1873 aa13.23□□□□□ -0.29
PDZD8-203ENST00000489302 RGL2O15211 777 aa13.23□□□□□ -0.29
PDZD8-203ENST00000489302 C21orf2O43822 256 aa13.23□□□□□ -0.29
PDZD8-203ENST00000489302 SRGNP10124 158 aa13.23□□□□□ -0.29
PDZD8-203ENST00000489302 ERFEQ4G0M1 354 aa13.23□□□□□ -0.29
PDZD8-203ENST00000489302 ATP10DQ9P241 1426 aa13.22□□□□□ -0.29
PDZD8-203ENST00000489302 UBN2Q6ZU65 1347 aa13.22□□□□□ -0.29
PDZD8-203ENST00000489302 TCERG1O14776 1098 aaKnown RBP13.22□□□□□ -0.29
PDZD8-203ENST00000489302 HOXB7P09629 217 aa13.22□□□□□ -0.29
PDZD8-203ENST00000489302 RASSF7Q02833 373 aa13.22□□□□□ -0.29
PDZD8-203ENST00000489302 CCDC27Q2M243 656 aa13.22□□□□□ -0.29
PDZD8-203ENST00000489302 C9orf131Q5VYM1 1079 aa13.22□□□□□ -0.29
PDZD8-203ENST00000489302 ZNF34Q8IZ26 560 aa13.22□□□□□ -0.29
PDZD8-203ENST00000489302 TSPYL6Q8N831 410 aa13.22□□□□□ -0.29
PDZD8-203ENST00000489302 NYXQ9GZU5 481 aa13.22□□□□□ -0.29
PDZD8-203ENST00000489302 DBF4Q9UBU7 674 aaPredicted RBP13.22□□□□□ -0.29
PDZD8-203ENST00000489302 PDZRN3Q9UPQ7 1066 aa13.22□□□□□ -0.29
PDZD8-203ENST00000489302 NUP98P52948 1817 aa13.22□□□□□ -0.29
PDZD8-203ENST00000489302 CNKSR1Q969H4 720 aa13.21□□□□□ -0.29
PDZD8-203ENST00000489302 MASTLQ96GX5 879 aa13.21□□□□□ -0.29
PDZD8-203ENST00000489302 RNF181Q9P0P0 153 aa13.21□□□□□ -0.29
PDZD8-203ENST00000489302 ARFGEF1Q9Y6D6 1849 aa13.2□□□□□ -0.3
PDZD8-203ENST00000489302 STYK1Q6J9G0 422 aa13.2□□□□□ -0.3
PDZD8-203ENST00000489302 PRPF40BQ6NWY9 871 aaKnown RBP13.2□□□□□ -0.3
PDZD8-203ENST00000489302 ANKRD13DQ6ZTN6 518 aa13.2□□□□□ -0.3
PDZD8-203ENST00000489302 PPP1R42Q7Z4L9 355 aa13.2□□□□□ -0.3
PDZD8-203ENST00000489302 PHAXQ9H814 394 aaKnown RBP13.2□□□□□ -0.3
PDZD8-203ENST00000489302 GPBP1L1Q9HC44 474 aaPredicted RBP13.2□□□□□ -0.3
PDZD8-203ENST00000489302 HYPKQ9NX55 129 aa13.2□□□□□ -0.3
PDZD8-203ENST00000489302 ABCC12Q96J65 1359 aa13.2□□□□□ -0.3
PDZD8-203ENST00000489302 COL11A2P13942 1736 aaPredicted RBP13.19□□□□□ -0.3
PDZD8-203ENST00000489302 NTSR2O95665 410 aa13.19□□□□□ -0.3
PDZD8-203ENST00000489302 NPR1P16066 1061 aa13.19□□□□□ -0.3
PDZD8-203ENST00000489302 TCIRG1Q13488 830 aa13.19□□□□□ -0.3
PDZD8-203ENST00000489302 PARP10Q53GL7 1025 aa13.19□□□□□ -0.3
PDZD8-203ENST00000489302 UTP14AQ9BVJ6 771 aaKnown RBP13.19□□□□□ -0.3
PDZD8-203ENST00000489302 DLEC1Q9Y238 1755 aa13.18□□□□□ -0.3
PDZD8-203ENST00000489302 ATP5J2-PTCD1G3V325 749 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms