RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 KCNA6P17658 529 aa11.91□□□□□ -0.5
TRAPPC12-221ENST00000489032 NR5A1Q13285 461 aa11.91□□□□□ -0.5
TRAPPC12-221ENST00000489032 INTS6LQ5JSJ4 861 aaKnown RBP11.91□□□□□ -0.5
TRAPPC12-221ENST00000489032 PLEKHM2Q8IWE5 1019 aa11.91□□□□□ -0.5
TRAPPC12-221ENST00000489032 SNIP1Q8TAD8 396 aaKnown RBP11.91□□□□□ -0.5
TRAPPC12-221ENST00000489032 MSH6P52701 1360 aa11.91□□□□□ -0.5
TRAPPC12-221ENST00000489032 KANK1Q14678 1352 aa11.91□□□□□ -0.5
TRAPPC12-221ENST00000489032 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-221ENST00000489032 USP4Q13107 963 aa11.9□□□□□ -0.5
TRAPPC12-221ENST00000489032 NCOA4Q13772 614 aa11.9□□□□□ -0.5
TRAPPC12-221ENST00000489032 COL16A1Q07092 1604 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC12-221ENST00000489032 RGS20O76081 388 aa11.89□□□□□ -0.51
TRAPPC12-221ENST00000489032 MYCP01106 439 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC12-221ENST00000489032 CDCA8Q53HL2 280 aa11.89□□□□□ -0.51
TRAPPC12-221ENST00000489032 CCDC85AQ96PX6 553 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC12-221ENST00000489032 PKD2L1Q9P0L9 805 aa11.89□□□□□ -0.51
TRAPPC12-221ENST00000489032 NOD1Q9Y239 953 aa11.89□□□□□ -0.51
TRAPPC12-221ENST00000489032 CFAP65Q6ZU64 1925 aaKnown RBP11.89□□□□□ -0.51
TRAPPC12-221ENST00000489032 ABCC3O15438 1527 aa11.88□□□□□ -0.51
TRAPPC12-221ENST00000489032 PRDM15P57071 1507 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC12-221ENST00000489032 TNFRSF10AO00220 468 aa11.88□□□□□ -0.51
TRAPPC12-221ENST00000489032 GRM5P41594 1212 aa11.88□□□□□ -0.51
TRAPPC12-221ENST00000489032 CCDC116Q8IYX3 515 aa11.88□□□□□ -0.51
TRAPPC12-221ENST00000489032 MKRN1Q9UHC7 482 aaKnown RBP11.88□□□□□ -0.51
TRAPPC12-221ENST00000489032 ATP5J2-PTCD1G3V325 749 aa11.87□□□□□ -0.51
TRAPPC12-221ENST00000489032 ERVH48-1M5A8F1 160 aa11.87□□□□□ -0.51
TRAPPC12-221ENST00000489032 TSGA10IPQ3SY00 556 aa11.87□□□□□ -0.51
TRAPPC12-221ENST00000489032 LARP1Q6PKG0 1096 aaKnown RBP11.87□□□□□ -0.51
TRAPPC12-221ENST00000489032 TRIM50Q86XT4 487 aa11.87□□□□□ -0.51
TRAPPC12-221ENST00000489032 TRAF7Q6Q0C0 670 aa11.86□□□□□ -0.51
TRAPPC12-221ENST00000489032 PGPEP1Q9NXJ5 209 aa11.86□□□□□ -0.51
TRAPPC12-221ENST00000489032 NKTRP30414 1462 aaKnown RBP11.86□□□□□ -0.51
TRAPPC12-221ENST00000489032 SHPRHQ149N8 1683 aa11.86□□□□□ -0.51
TRAPPC12-221ENST00000489032 GDF9O60383 454 aa11.85□□□□□ -0.51
TRAPPC12-221ENST00000489032 ATP1A2P50993 1020 aa11.85□□□□□ -0.51
TRAPPC12-221ENST00000489032 RBM19Q9Y4C8 960 aaKnown RBP11.85□□□□□ -0.51
TRAPPC12-221ENST00000489032 HFM1A2PYH4 1435 aa11.85□□□□□ -0.51
TRAPPC12-221ENST00000489032 TMEM2Q9UHN6 1383 aa11.84□□□□□ -0.51
TRAPPC12-221ENST00000489032 SLC26A8Q96RN1 970 aa11.84□□□□□ -0.51
TRAPPC12-221ENST00000489032 EMILIN1Q9Y6C2 1016 aa11.84□□□□□ -0.51
TRAPPC12-221ENST00000489032 NAIPQ13075 1403 aa11.84□□□□□ -0.51
TRAPPC12-221ENST00000489032 AFF2P51816 1311 aa11.84□□□□□ -0.51
TRAPPC12-221ENST00000489032 CSB-PGBD3P0DP91 1061 aa11.83□□□□□ -0.52
TRAPPC12-221ENST00000489032 RASA1P20936 1047 aa11.83□□□□□ -0.52
TRAPPC12-221ENST00000489032 MYT1Q01538 1121 aa11.83□□□□□ -0.52
TRAPPC12-221ENST00000489032 PDE4CQ08493 712 aa11.83□□□□□ -0.52
TRAPPC12-221ENST00000489032 NNTQ13423 1086 aa11.83□□□□□ -0.52
TRAPPC12-221ENST00000489032 CDCA7Q9BWT1 371 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC12-221ENST00000489032 GCC2Q8IWJ2 1684 aa11.83□□□□□ -0.52
TRAPPC12-221ENST00000489032 RGS12O14924 1447 aa11.83□□□□□ -0.52
TRAPPC12-221ENST00000489032 NWD1Q149M9 1564 aa11.83□□□□□ -0.52
TRAPPC12-221ENST00000489032 RBM6P78332 1123 aaKnown RBP11.82□□□□□ -0.52
TRAPPC12-221ENST00000489032 PSME1Q06323 249 aa11.82□□□□□ -0.52
TRAPPC12-221ENST00000489032 PPP1R26Q5T8A7 1209 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC12-221ENST00000489032 CEP152O94986 1710 aa11.82□□□□□ -0.52
TRAPPC12-221ENST00000489032 NUP155O75694 1391 aa11.81□□□□□ -0.52
TRAPPC12-221ENST00000489032 ATAD2Q6PL18 1390 aa11.81□□□□□ -0.52
TRAPPC12-221ENST00000489032 PRR20EP86478 221 aa11.81□□□□□ -0.52
TRAPPC12-221ENST00000489032 PRR20CP86479 221 aa11.81□□□□□ -0.52
TRAPPC12-221ENST00000489032 PRR20DP86480 221 aa11.81□□□□□ -0.52
TRAPPC12-221ENST00000489032 PRR20BP86481 221 aa11.81□□□□□ -0.52
TRAPPC12-221ENST00000489032 PRR20AP86496 221 aa11.81□□□□□ -0.52
TRAPPC12-221ENST00000489032 CC2D2BQ6DHV5 1058 aa11.81□□□□□ -0.52
TRAPPC12-221ENST00000489032 TMPRSS4Q9NRS4 437 aa11.81□□□□□ -0.52
TRAPPC12-221ENST00000489032 PIK3C2BO00750 1634 aa11.81□□□□□ -0.52
TRAPPC12-221ENST00000489032 AHDC1Q5TGY3 1603 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC12-221ENST00000489032 MROH1Q8NDA8 1641 aa11.81□□□□□ -0.52
TRAPPC12-221ENST00000489032 TET3O43151 1660 aa11.81□□□□□ -0.52
TRAPPC12-221ENST00000489032 KDM5AP29375 1690 aaKnown RBP11.81□□□□□ -0.52
TRAPPC12-221ENST00000489032 SETBP1Q9Y6X0 1596 aa11.8□□□□□ -0.52
TRAPPC12-221ENST00000489032 J3QL48 77 aa11.8□□□□□ -0.52
TRAPPC12-221ENST00000489032 OGFOD1Q8N543 542 aa11.8□□□□□ -0.52
TRAPPC12-221ENST00000489032 QTRT2Q9H974 415 aaKnown RBP11.8□□□□□ -0.52
TRAPPC12-221ENST00000489032 CYLDQ9NQC7 956 aa11.8□□□□□ -0.52
TRAPPC12-221ENST00000489032 UNC13BO14795 1591 aa11.79□□□□□ -0.52
TRAPPC12-221ENST00000489032 SETD5Q9C0A6 1442 aa11.79□□□□□ -0.52
TRAPPC12-221ENST00000489032 ATG7O95352 703 aa11.79□□□□□ -0.52
TRAPPC12-221ENST00000489032 GTF2IP78347 998 aa11.79□□□□□ -0.52
TRAPPC12-221ENST00000489032 TRIM26Q12899 539 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC12-221ENST00000489032 DNAAF2Q9NVR5 837 aaKnown RBP11.79□□□□□ -0.52
TRAPPC12-221ENST00000489032 TOR4AQ9NXH8 423 aa11.79□□□□□ -0.52
TRAPPC12-221ENST00000489032 PDZRN3Q9UPQ7 1066 aa11.79□□□□□ -0.52
TRAPPC12-221ENST00000489032 EFCAB6Q5THR3 1501 aa11.79□□□□□ -0.52
TRAPPC12-221ENST00000489032 LMTK2Q8IWU2 1503 aa11.78□□□□□ -0.52
TRAPPC12-221ENST00000489032 FAM196BA6NMK8 535 aa11.78□□□□□ -0.52
TRAPPC12-221ENST00000489032 NR3C2P08235 984 aa11.78□□□□□ -0.52
TRAPPC12-221ENST00000489032 SRPK2P78362 688 aaKnown RBP11.78□□□□□ -0.52
TRAPPC12-221ENST00000489032 ZNF784Q8NCA9 323 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC12-221ENST00000489032 NGLY1Q96IV0 654 aa11.78□□□□□ -0.52
TRAPPC12-221ENST00000489032 ARHGAP31Q2M1Z3 1444 aa11.77□□□□□ -0.52
TRAPPC12-221ENST00000489032 ERVK-9P63128 1117 aa11.77□□□□□ -0.53
TRAPPC12-221ENST00000489032 NCOA3Q9Y6Q9 1424 aa11.77□□□□□ -0.53
TRAPPC12-221ENST00000489032 USP17L15C9J2P7 530 aa11.76□□□□□ -0.53
TRAPPC12-221ENST00000489032 USP17L10C9JJH3 530 aa11.76□□□□□ -0.53
TRAPPC12-221ENST00000489032 USP17L13C9JLJ4 530 aa11.76□□□□□ -0.53
TRAPPC12-221ENST00000489032 USP17L12C9JPN9 530 aa11.76□□□□□ -0.53
TRAPPC12-221ENST00000489032 USP17L11C9JVI0 530 aa11.76□□□□□ -0.53
TRAPPC12-221ENST00000489032 USP17L21D6R901 530 aa11.76□□□□□ -0.53
TRAPPC12-221ENST00000489032 USP17L18D6R9N7 530 aa11.76□□□□□ -0.53
TRAPPC12-221ENST00000489032 USP17L22D6RA61 530 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms