RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 DPY19L2Q6NUT2 758 aa15.4■□□□□ 0.06
USP11-210ENST00000489030 CNBD1Q8NA66 436 aa15.4■□□□□ 0.06
USP11-210ENST00000489030 C7orf43Q8WVR3 580 aa15.4■□□□□ 0.06
USP11-210ENST00000489030 LTBP3Q9NS15 1303 aa15.4■□□□□ 0.06
USP11-210ENST00000489030 DICER1Q9UPY3 1922 aaKnown RBP15.39■□□□□ 0.05
USP11-210ENST00000489030 CEMIPQ8WUJ3 1361 aa15.38■□□□□ 0.05
USP11-210ENST00000489030 STYK1Q6J9G0 422 aa15.38■□□□□ 0.05
USP11-210ENST00000489030 SLC51AQ86UW1 340 aa15.38■□□□□ 0.05
USP11-210ENST00000489030 DZIP3Q86Y13 1208 aaKnown RBP15.38■□□□□ 0.05
USP11-210ENST00000489030 FMNL2Q96PY5 1086 aa15.38■□□□□ 0.05
USP11-210ENST00000489030 SETDB2Q96T68 719 aa15.38■□□□□ 0.05
USP11-210ENST00000489030 ZNF541Q9H0D2 1346 aa15.38■□□□□ 0.05
USP11-210ENST00000489030 FOXN1O15353 648 aa15.37■□□□□ 0.05
USP11-210ENST00000489030 GAS2L2Q8NHY3 880 aa15.37■□□□□ 0.05
USP11-210ENST00000489030 CNKSR1Q969H4 720 aa15.37■□□□□ 0.05
USP11-210ENST00000489030 CREBZFQ9NS37 354 aa15.37■□□□□ 0.05
USP11-210ENST00000489030 CACNA1SQ13698 1873 aa15.37■□□□□ 0.05
USP11-210ENST00000489030 PASKQ96RG2 1323 aa15.37■□□□□ 0.05
USP11-210ENST00000489030 NBPF26B4DH59 902 aa15.36■□□□□ 0.05
USP11-210ENST00000489030 PRKAR2BP31323 418 aa15.36■□□□□ 0.05
USP11-210ENST00000489030 NBPF10Q6P3W6 841 aaKnown RBP15.36■□□□□ 0.05
USP11-210ENST00000489030 NBPF15Q8N660 670 aa15.36■□□□□ 0.05
USP11-210ENST00000489030 MASTLQ96GX5 879 aa15.36■□□□□ 0.05
USP11-210ENST00000489030 TEX13AQ9BXU3 409 aaPredicted RBP15.36■□□□□ 0.05
USP11-210ENST00000489030 TAF1DQ9H5J8 278 aaPredicted RBP15.36■□□□□ 0.05
USP11-210ENST00000489030 ZNF277Q9NRM2 450 aaPredicted RBP15.36■□□□□ 0.05
USP11-210ENST00000489030 BCORQ6W2J9 1755 aa15.36■□□□□ 0.05
USP11-210ENST00000489030 BTBD11A6QL63 1104 aa15.35■□□□□ 0.05
USP11-210ENST00000489030 RSPH6AQ9H0K4 717 aa15.35■□□□□ 0.05
USP11-210ENST00000489030 PDZRN3Q9UPQ7 1066 aa15.35■□□□□ 0.05
USP11-210ENST00000489030 CNTNAP1P78357 1384 aa15.35■□□□□ 0.05
USP11-210ENST00000489030 FAM177BA6PVY3 158 aa15.34■□□□□ 0.05
USP11-210ENST00000489030 NPHP1O15259 732 aa15.34■□□□□ 0.05
USP11-210ENST00000489030 ST5P78524 1137 aa15.34■□□□□ 0.05
USP11-210ENST00000489030 DCTN1Q14203 1278 aa15.34■□□□□ 0.05
USP11-210ENST00000489030 MCM10Q7L590 875 aa15.34■□□□□ 0.05
USP11-210ENST00000489030 NBPF5PQ86XG9 351 aaPredicted RBP15.34■□□□□ 0.05
USP11-210ENST00000489030 L3MBTL3Q96JM7 780 aaPredicted RBP15.34■□□□□ 0.05
USP11-210ENST00000489030 ITGBL1O95965 494 aaPredicted RBP15.33■□□□□ 0.04
USP11-210ENST00000489030 VEGFBP49765 207 aa15.33■□□□□ 0.04
USP11-210ENST00000489030 HLFQ16534 295 aa15.33■□□□□ 0.04
USP11-210ENST00000489030 ARFGEF2Q9Y6D5 1785 aa15.32■□□□□ 0.04
USP11-210ENST00000489030 KLRG2A4D1S0 409 aaPredicted RBP15.32■□□□□ 0.04
USP11-210ENST00000489030 LDHDQ86WU2 507 aa15.32■□□□□ 0.04
USP11-210ENST00000489030 FKBP4Q02790 459 aaKnown RBP eCLIP15.31■□□□□ 0.04
USP11-210ENST00000489030 CCDC93Q567U6 631 aa15.31■□□□□ 0.04
USP11-210ENST00000489030 EAPPQ56P03 285 aaPredicted RBP15.31■□□□□ 0.04
USP11-210ENST00000489030 COL4A5P29400 1685 aa15.31■□□□□ 0.04
USP11-210ENST00000489030 NPR1P16066 1061 aa15.3■□□□□ 0.04
USP11-210ENST00000489030 FMR1Q06787 632 aaKnown RBP eCLIP15.3■□□□□ 0.04
USP11-210ENST00000489030 SNED1Q8TER0 1413 aa15.3■□□□□ 0.04
USP11-210ENST00000489030 ABCC12Q96J65 1359 aa15.3■□□□□ 0.04
USP11-210ENST00000489030 MIS18AQ9NYP9 233 aa15.3■□□□□ 0.04
USP11-210ENST00000489030 NPC1L1Q9UHC9 1359 aa15.3■□□□□ 0.04
USP11-210ENST00000489030 NIP7Q9Y221 180 aaKnown RBP eCLIP15.3■□□□□ 0.04
USP11-210ENST00000489030 RNF123Q5XPI4 1314 aa15.29■□□□□ 0.04
USP11-210ENST00000489030 SNRPA1P09661 255 aaKnown RBP15.29■□□□□ 0.04
USP11-210ENST00000489030 SOGA3Q5TF21 947 aa15.29■□□□□ 0.04
USP11-210ENST00000489030 MAP1SQ66K74 1059 aaPredicted RBP15.29■□□□□ 0.04
USP11-210ENST00000489030 ADAMTSL1Q8N6G6 1762 aa15.29■□□□□ 0.04
USP11-210ENST00000489030 IQCA1LA6NCM1 817 aa15.28■□□□□ 0.04
USP11-210ENST00000489030 CLEC4GQ6UXB4 293 aa15.28■□□□□ 0.04
USP11-210ENST00000489030 NPM2Q86SE8 214 aaKnown RBP15.28■□□□□ 0.04
USP11-210ENST00000489030 SYNE4Q8N205 404 aa15.28■□□□□ 0.04
USP11-210ENST00000489030 TMEM88BA6NKF7 163 aa15.27■□□□□ 0.04
USP11-210ENST00000489030 EPHX2P34913 555 aa15.27■□□□□ 0.04
USP11-210ENST00000489030 NUTM1Q86Y26 1132 aa15.27■□□□□ 0.04
USP11-210ENST00000489030 HACL1Q9UJ83 578 aa15.27■□□□□ 0.04
USP11-210ENST00000489030 SCN4AP35499 1836 aa15.27■□□□□ 0.03
USP11-210ENST00000489030 FZD9O00144 591 aa15.26■□□□□ 0.03
USP11-210ENST00000489030 U2AF1L5P0DN76 240 aaPredicted RBP15.26■□□□□ 0.03
USP11-210ENST00000489030 IARSP41252 1262 aaKnown RBP15.26■□□□□ 0.03
USP11-210ENST00000489030 LBX1P52954 281 aa15.26■□□□□ 0.03
USP11-210ENST00000489030 U2AF1Q01081 240 aaKnown RBP eCLIP15.26■□□□□ 0.03
USP11-210ENST00000489030 NGEFQ8N5V2 710 aa15.26■□□□□ 0.03
USP11-210ENST00000489030 WBP1LQ9NX94 342 aa15.26■□□□□ 0.03
USP11-210ENST00000489030 CLEC11AQ9Y240 323 aa15.26■□□□□ 0.03
USP11-210ENST00000489030 LTBP1Q14766 1721 aa15.26■□□□□ 0.03
USP11-210ENST00000489030 DIEXFQ68CQ4 756 aaKnown RBP15.25■□□□□ 0.03
USP11-210ENST00000489030 TPTE2Q6XPS3 522 aa15.25■□□□□ 0.03
USP11-210ENST00000489030 C3orf67Q6ZVT6 689 aa15.25■□□□□ 0.03
USP11-210ENST00000489030 CNTROBQ8N137 903 aa15.25■□□□□ 0.03
USP11-210ENST00000489030 PRDM10Q9NQV6 1147 aa15.25■□□□□ 0.03
USP11-210ENST00000489030 ZNF652Q9Y2D9 606 aa15.25■□□□□ 0.03
USP11-210ENST00000489030 HSPA8P11142 646 aaKnown RBP15.24■□□□□ 0.03
USP11-210ENST00000489030 PPP2R1AP30153 589 aa15.24■□□□□ 0.03
USP11-210ENST00000489030 CTCFP49711 727 aaPredicted RBP15.24■□□□□ 0.03
USP11-210ENST00000489030 TTLL7Q6ZT98 887 aa15.24■□□□□ 0.03
USP11-210ENST00000489030 RTKN2Q8IZC4 609 aa15.24■□□□□ 0.03
USP11-210ENST00000489030 EPS15P42566 896 aa15.23■□□□□ 0.03
USP11-210ENST00000489030 CRY2Q49AN0 593 aa15.23■□□□□ 0.03
USP11-210ENST00000489030 THUMPD2Q9BTF0 503 aaKnown RBP15.23■□□□□ 0.03
USP11-210ENST00000489030 UBN2Q6ZU65 1347 aa15.22■□□□□ 0.03
USP11-210ENST00000489030 RASSF10A6NK89 507 aa15.22■□□□□ 0.03
USP11-210ENST00000489030 GPTP24298 496 aa15.22■□□□□ 0.03
USP11-210ENST00000489030 RTF1Q92541 710 aaKnown RBP15.22■□□□□ 0.03
USP11-210ENST00000489030 GJA3Q9Y6H8 435 aa15.22■□□□□ 0.03
USP11-210ENST00000489030 TRAF5O00463 557 aa15.21■□□□□ 0.03
USP11-210ENST00000489030 TCERG1O14776 1098 aaKnown RBP15.21■□□□□ 0.03
USP11-210ENST00000489030 SCNN1DP51172 638 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms