RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 HSH2DQ96JZ2 352 aa7.48□□□□□ -1.21
RFC4-213ENST00000489028 CFHR5Q9BXR6 569 aa7.48□□□□□ -1.21
RFC4-213ENST00000489028 CHMP3Q9Y3E7 222 aa7.48□□□□□ -1.21
RFC4-213ENST00000489028 IGF1RP08069 1367 aa7.47□□□□□ -1.21
RFC4-213ENST00000489028 DCDC2BA2VCK2 349 aa7.47□□□□□ -1.21
RFC4-213ENST00000489028 ATXN7O15265 892 aaPredicted RBP7.47□□□□□ -1.21
RFC4-213ENST00000489028 SRSF11Q05519 484 aaKnown RBP7.47□□□□□ -1.21
RFC4-213ENST00000489028 TNP2Q05952 138 aa7.47□□□□□ -1.21
RFC4-213ENST00000489028 FKBP5Q13451 457 aaPredicted RBP7.47□□□□□ -1.21
RFC4-213ENST00000489028 ZNF280CQ8ND82 737 aa7.47□□□□□ -1.21
RFC4-213ENST00000489028 ATXN7L1Q9ULK2 861 aaPredicted RBP7.47□□□□□ -1.21
RFC4-213ENST00000489028 PCDHGC4Q9Y5F7 938 aa7.47□□□□□ -1.21
RFC4-213ENST00000489028 C2CD2LO14523 706 aa7.46□□□□□ -1.22
RFC4-213ENST00000489028 MAPTP10636 758 aaKnown RBP7.46□□□□□ -1.22
RFC4-213ENST00000489028 MX2P20592 715 aa7.46□□□□□ -1.22
RFC4-213ENST00000489028 CTBSQ01459 385 aa7.46□□□□□ -1.22
RFC4-213ENST00000489028 SAMD5Q5TGI4 173 aa7.46□□□□□ -1.22
RFC4-213ENST00000489028 ZNF385CQ66K41 422 aaPredicted RBP7.46□□□□□ -1.22
RFC4-213ENST00000489028 FIGNL1Q6PIW4 674 aa7.46□□□□□ -1.22
RFC4-213ENST00000489028 ARID3AQ99856 593 aa7.46□□□□□ -1.22
RFC4-213ENST00000489028 STRN4Q9NRL3 753 aa7.46□□□□□ -1.22
RFC4-213ENST00000489028 EFSO43281 561 aa7.45□□□□□ -1.22
RFC4-213ENST00000489028 FOXO3O43524 673 aa7.45□□□□□ -1.22
RFC4-213ENST00000489028 FAM157BP0CG42 384 aa7.45□□□□□ -1.22
RFC4-213ENST00000489028 FGFR3P22607 806 aa7.45□□□□□ -1.22
RFC4-213ENST00000489028 GRIN2CQ14957 1233 aa7.45□□□□□ -1.22
RFC4-213ENST00000489028 LYPD4Q6UWN0 246 aa7.45□□□□□ -1.22
RFC4-213ENST00000489028 QTRT2Q9H974 415 aaKnown RBP7.45□□□□□ -1.22
RFC4-213ENST00000489028 PHF24Q9UPV7 400 aa7.45□□□□□ -1.22
RFC4-213ENST00000489028 GPC6Q9Y625 555 aaPredicted RBP7.45□□□□□ -1.22
RFC4-213ENST00000489028 CARNS1A5YM72 827 aa7.44□□□□□ -1.22
RFC4-213ENST00000489028 TMEM88BA6NKF7 163 aa7.44□□□□□ -1.22
RFC4-213ENST00000489028 KHNYNO15037 678 aaKnown RBP7.44□□□□□ -1.22
RFC4-213ENST00000489028 PPP1R15AO75807 674 aaPredicted RBP7.44□□□□□ -1.22
RFC4-213ENST00000489028 CD33P20138 364 aa7.44□□□□□ -1.22
RFC4-213ENST00000489028 CAPN12Q6ZSI9 719 aa7.44□□□□□ -1.22
RFC4-213ENST00000489028 CLP1Q92989 425 aaKnown RBP7.44□□□□□ -1.22
RFC4-213ENST00000489028 ACDQ96AP0 544 aa7.44□□□□□ -1.22
RFC4-213ENST00000489028 SUSD3Q96L08 255 aa7.44□□□□□ -1.22
RFC4-213ENST00000489028 BCS1LQ9Y276 419 aa7.44□□□□□ -1.22
RFC4-213ENST00000489028 GJA3Q9Y6H8 435 aa7.44□□□□□ -1.22
RFC4-213ENST00000489028 RTN1Q16799 776 aa7.43□□□□□ -1.22
RFC4-213ENST00000489028 CXXC1Q9P0U4 656 aaPredicted RBP7.43□□□□□ -1.22
RFC4-213ENST00000489028 STK17AQ9UEE5 414 aa7.43□□□□□ -1.22
RFC4-213ENST00000489028 CELA2BP08218 269 aaPredicted RBP7.42□□□□□ -1.22
RFC4-213ENST00000489028 KLK14Q9P0G3 267 aa7.42□□□□□ -1.22
RFC4-213ENST00000489028 BMP4P12644 408 aa7.41□□□□□ -1.22
RFC4-213ENST00000489028 TYRO3Q06418 890 aa7.41□□□□□ -1.22
RFC4-213ENST00000489028 SFSWAPQ12872 951 aaKnown RBP7.41□□□□□ -1.22
RFC4-213ENST00000489028 MKNK1Q9BUB5 465 aa7.41□□□□□ -1.22
RFC4-213ENST00000489028 SAP130Q9H0E3 1048 aa7.41□□□□□ -1.22
RFC4-213ENST00000489028 LRFN2Q9ULH4 789 aa7.41□□□□□ -1.22
RFC4-213ENST00000489028 ARHGEF15O94989 841 aa7.4□□□□□ -1.22
RFC4-213ENST00000489028 SCNN1AP37088 669 aa7.4□□□□□ -1.22
RFC4-213ENST00000489028 MAP2K3P46734 347 aa7.4□□□□□ -1.22
RFC4-213ENST00000489028 DGKZQ13574 1117 aa7.4□□□□□ -1.22
RFC4-213ENST00000489028 C1orf229Q6ZS94 237 aaPredicted RBP7.4□□□□□ -1.22
RFC4-213ENST00000489028 SVOPQ8N4V2 548 aa7.4□□□□□ -1.22
RFC4-213ENST00000489028 VTI1AQ96AJ9 217 aa7.4□□□□□ -1.22
RFC4-213ENST00000489028 MYO19Q96H55 970 aa7.4□□□□□ -1.22
RFC4-213ENST00000489028 NEUROD4Q9HD90 331 aa7.4□□□□□ -1.22
RFC4-213ENST00000489028 DMGDHQ9UI17 866 aaKnown RBP7.4□□□□□ -1.22
RFC4-213ENST00000489028 ATP2B4P23634 1241 aa7.39□□□□□ -1.23
RFC4-213ENST00000489028 COX20Q5RI15 118 aa7.39□□□□□ -1.23
RFC4-213ENST00000489028 FAM182BQ5T319 152 aa7.39□□□□□ -1.23
RFC4-213ENST00000489028 BTLAQ7Z6A9 289 aa7.39□□□□□ -1.23
RFC4-213ENST00000489028 CEP63Q96MT8 703 aa7.39□□□□□ -1.23
RFC4-213ENST00000489028 OXCT2Q9BYC2 517 aaPredicted RBP7.39□□□□□ -1.23
RFC4-213ENST00000489028 ANKIB1Q9P2G1 1089 aa7.39□□□□□ -1.23
RFC4-213ENST00000489028 KLF15Q9UIH9 416 aa7.39□□□□□ -1.23
RFC4-213ENST00000489028 NSFL1CQ9UNZ2 370 aaKnown RBP7.39□□□□□ -1.23
RFC4-213ENST00000489028 TGFBR3LH3BV60 316 aa7.38□□□□□ -1.23
RFC4-213ENST00000489028 GRNP28799 593 aaKnown RBP7.38□□□□□ -1.23
RFC4-213ENST00000489028 LAMC2Q13753 1193 aa7.38□□□□□ -1.23
RFC4-213ENST00000489028 SLC30A3Q99726 388 aa7.38□□□□□ -1.23
RFC4-213ENST00000489028 BRD7Q9NPI1 651 aa7.38□□□□□ -1.23
RFC4-213ENST00000489028 MARK1Q9P0L2 795 aa7.38□□□□□ -1.23
RFC4-213ENST00000489028 BCRP11274 1271 aa7.37□□□□□ -1.23
RFC4-213ENST00000489028 FAM26DQ5JW98 314 aa7.37□□□□□ -1.23
RFC4-213ENST00000489028 IER5Q5VY09 327 aa7.37□□□□□ -1.23
RFC4-213ENST00000489028 GGA1Q9UJY5 639 aa7.37□□□□□ -1.23
RFC4-213ENST00000489028 SHISA8B8ZZ34 492 aa7.36□□□□□ -1.23
RFC4-213ENST00000489028 TNFRSF10BO14763 440 aa7.36□□□□□ -1.23
RFC4-213ENST00000489028 ARAFP10398 606 aa7.36□□□□□ -1.23
RFC4-213ENST00000489028 KCNQ4P56696 695 aa7.36□□□□□ -1.23
RFC4-213ENST00000489028 NAA30Q147X3 362 aaPredicted RBP7.36□□□□□ -1.23
RFC4-213ENST00000489028 COL26A1Q96A83 441 aa7.36□□□□□ -1.23
RFC4-213ENST00000489028 SEPT3Q9UH03 358 aa7.36□□□□□ -1.23
RFC4-213ENST00000489028 ADAMTS8Q9UP79 889 aa7.36□□□□□ -1.23
RFC4-213ENST00000489028 NEURL1BA8MQ27 555 aa7.35□□□□□ -1.23
RFC4-213ENST00000489028 OIP5O43482 229 aa7.35□□□□□ -1.23
RFC4-213ENST00000489028 PCBP4P57723 403 aaKnown RBP7.35□□□□□ -1.23
RFC4-213ENST00000489028 HIF1AQ16665 826 aa7.35□□□□□ -1.23
RFC4-213ENST00000489028 C11orf91Q3C1V1 193 aa7.35□□□□□ -1.23
RFC4-213ENST00000489028 ZNF468Q5VIY5 522 aaPredicted RBP7.35□□□□□ -1.23
RFC4-213ENST00000489028 PHLDB3Q6NSJ2 640 aa7.35□□□□□ -1.23
RFC4-213ENST00000489028 RAB44Q7Z6P3 723 aaPredicted RBP7.35□□□□□ -1.23
RFC4-213ENST00000489028 FCHSD1Q86WN1 690 aa7.35□□□□□ -1.23
RFC4-213ENST00000489028 MICAL2O94851 1124 aa7.34□□□□□ -1.23
RFC4-213ENST00000489028 SSFA2P28290 1259 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms