RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 SAMD1Q6SPF0 538 aaPredicted RBP9.25□□□□□ -0.93
BEST3-205ENST00000488961 LTN1O94822 1766 aa9.25□□□□□ -0.93
BEST3-205ENST00000488961 SPDYE4A6NLX3 237 aa9.25□□□□□ -0.93
BEST3-205ENST00000488961 IP6K1Q92551 441 aa9.25□□□□□ -0.93
BEST3-205ENST00000488961 CHMP4CQ96CF2 233 aa9.25□□□□□ -0.93
BEST3-205ENST00000488961 TLR7Q9NYK1 1049 aaKnown RBP9.25□□□□□ -0.93
BEST3-205ENST00000488961 CHMP3Q9Y3E7 222 aa9.25□□□□□ -0.93
BEST3-205ENST00000488961 DDX49Q9Y6V7 483 aaKnown RBP9.25□□□□□ -0.93
BEST3-205ENST00000488961 EP400Q96L91 3159 aa9.24□□□□□ -0.93
BEST3-205ENST00000488961 ATP8B2P98198 1209 aa9.24□□□□□ -0.93
BEST3-205ENST00000488961 TOPAZ1Q8N9V7 1692 aa9.24□□□□□ -0.93
BEST3-205ENST00000488961 ERC2O15083 957 aa9.23□□□□□ -0.93
BEST3-205ENST00000488961 TMEM132AQ24JP5 1023 aa9.23□□□□□ -0.93
BEST3-205ENST00000488961 DNAAF4Q8WXU2 420 aa9.23□□□□□ -0.93
BEST3-205ENST00000488961 PPP1R9BQ96SB3 815 aa9.23□□□□□ -0.93
BEST3-205ENST00000488961 RNF216Q9NWF9 866 aaPredicted RBP9.23□□□□□ -0.93
BEST3-205ENST00000488961 RGPD5Q99666 1765 aa9.23□□□□□ -0.93
BEST3-205ENST00000488961 TCHHQ07283 1943 aa9.23□□□□□ -0.93
BEST3-205ENST00000488961 FAM177BA6PVY3 158 aa9.23□□□□□ -0.93
BEST3-205ENST00000488961 KCNJ4P48050 445 aa9.23□□□□□ -0.93
BEST3-205ENST00000488961 NASPP49321 788 aaPredicted RBP9.23□□□□□ -0.93
BEST3-205ENST00000488961 FOSBP53539 338 aa9.23□□□□□ -0.93
BEST3-205ENST00000488961 RNF214Q8ND24 703 aa9.23□□□□□ -0.93
BEST3-205ENST00000488961 STRN4Q9NRL3 753 aa9.23□□□□□ -0.93
BEST3-205ENST00000488961 USP16Q9Y5T5 823 aa9.23□□□□□ -0.93
BEST3-205ENST00000488961 KDRP35968 1356 aa9.23□□□□□ -0.93
BEST3-205ENST00000488961 KIAA0232Q92628 1395 aa9.23□□□□□ -0.93
BEST3-205ENST00000488961 BAG4O95429 457 aaKnown RBP9.22□□□□□ -0.93
BEST3-205ENST00000488961 CASC1Q6TDU7 716 aa9.22□□□□□ -0.93
BEST3-205ENST00000488961 RHPN1Q8TCX5 695 aa9.22□□□□□ -0.93
BEST3-205ENST00000488961 KCNG1Q9UIX4 513 aa9.22□□□□□ -0.93
BEST3-205ENST00000488961 ISY1Q9ULR0 285 aaKnown RBP9.22□□□□□ -0.93
BEST3-205ENST00000488961 NALCNQ8IZF0 1738 aa9.22□□□□□ -0.93
BEST3-205ENST00000488961 RNMTO43148 476 aaKnown RBP9.22□□□□□ -0.93
BEST3-205ENST00000488961 CHMLP26374 656 aa9.22□□□□□ -0.93
BEST3-205ENST00000488961 RAB3GAP1Q15042 981 aa9.22□□□□□ -0.93
BEST3-205ENST00000488961 ESYT1Q9BSJ8 1104 aa9.22□□□□□ -0.93
BEST3-205ENST00000488961 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.22□□□□□ -0.93
BEST3-205ENST00000488961 RGPD1P0DJD0 1748 aa9.22□□□□□ -0.93
BEST3-205ENST00000488961 GNAI3P08754 354 aa9.22□□□□□ -0.93
BEST3-205ENST00000488961 SASS6Q6UVJ0 657 aa9.22□□□□□ -0.93
BEST3-205ENST00000488961 RASEFQ8IZ41 740 aa9.22□□□□□ -0.93
BEST3-205ENST00000488961 ZNF710Q8N1W2 664 aa9.22□□□□□ -0.93
BEST3-205ENST00000488961 BOLA2Q9H3K6 86 aa9.22□□□□□ -0.93
BEST3-205ENST00000488961 ZDHHC9Q9Y397 364 aa9.22□□□□□ -0.93
BEST3-205ENST00000488961 TAF6LQ9Y6J9 622 aa9.22□□□□□ -0.93
BEST3-205ENST00000488961 EPHA10Q5JZY3 1008 aa9.21□□□□□ -0.93
BEST3-205ENST00000488961 ZNF771Q7L3S4 317 aaPredicted RBP9.21□□□□□ -0.93
BEST3-205ENST00000488961 RIC3Q7Z5B4 369 aa9.21□□□□□ -0.93
BEST3-205ENST00000488961 MYD88Q99836 296 aa9.21□□□□□ -0.93
BEST3-205ENST00000488961 BICC1Q9H694 974 aaKnown RBP9.21□□□□□ -0.93
BEST3-205ENST00000488961 NWD1Q149M9 1564 aa9.21□□□□□ -0.94
BEST3-205ENST00000488961 DDIT3P35638 169 aa9.21□□□□□ -0.94
BEST3-205ENST00000488961 BEND3Q5T5X7 828 aa9.21□□□□□ -0.94
BEST3-205ENST00000488961 TAF3Q5VWG9 929 aa9.21□□□□□ -0.94
BEST3-205ENST00000488961 AACSQ86V21 672 aa9.21□□□□□ -0.94
BEST3-205ENST00000488961 SUCLG2Q96I99 432 aa9.21□□□□□ -0.94
BEST3-205ENST00000488961 TMX3Q96JJ7 454 aa9.21□□□□□ -0.94
BEST3-205ENST00000488961 ADCY9O60503 1353 aa9.2□□□□□ -0.94
BEST3-205ENST00000488961 PTH1RQ03431 593 aa9.2□□□□□ -0.94
BEST3-205ENST00000488961 PLEKHO1Q53GL0 409 aaPredicted RBP9.2□□□□□ -0.94
BEST3-205ENST00000488961 ARHGEF25Q86VW2 580 aa9.2□□□□□ -0.94
BEST3-205ENST00000488961 XAGE3Q8WTP9 111 aa9.2□□□□□ -0.94
BEST3-205ENST00000488961 SNX21Q969T3 373 aa9.2□□□□□ -0.94
BEST3-205ENST00000488961 ZNF496Q96IT1 587 aaPredicted RBP9.2□□□□□ -0.94
BEST3-205ENST00000488961 FAM227BQ96M60 508 aa9.2□□□□□ -0.94
BEST3-205ENST00000488961 DDX11L8A8MPP1 907 aa9.2□□□□□ -0.94
BEST3-205ENST00000488961 ZNF500O60304 480 aaPredicted RBP9.2□□□□□ -0.94
BEST3-205ENST00000488961 LARGE1O95461 756 aa9.2□□□□□ -0.94
BEST3-205ENST00000488961 COPS6Q7L5N1 327 aa9.2□□□□□ -0.94
BEST3-205ENST00000488961 RAPGEF4Q8WZA2 1011 aa9.2□□□□□ -0.94
BEST3-205ENST00000488961 GIGYF1O75420 1035 aaPredicted RBP9.19□□□□□ -0.94
BEST3-205ENST00000488961 STK3Q13188 491 aa9.19□□□□□ -0.94
BEST3-205ENST00000488961 RABEP1Q15276 862 aa9.19□□□□□ -0.94
BEST3-205ENST00000488961 ADCK5Q3MIX3 580 aa9.19□□□□□ -0.94
BEST3-205ENST00000488961 NECAB1Q8N987 351 aa9.19□□□□□ -0.94
BEST3-205ENST00000488961 MARF1Q9Y4F3 1742 aaKnown RBP9.19□□□□□ -0.94
BEST3-205ENST00000488961 KDM4FA0A1W2PPD8 638 aa9.19□□□□□ -0.94
BEST3-205ENST00000488961 ST18O60284 1047 aa9.19□□□□□ -0.94
BEST3-205ENST00000488961 REC8O95072 547 aa9.19□□□□□ -0.94
BEST3-205ENST00000488961 GBP4Q96PP9 640 aa9.19□□□□□ -0.94
BEST3-205ENST00000488961 IBTKQ9P2D0 1353 aaPredicted RBP9.19□□□□□ -0.94
BEST3-205ENST00000488961 KDM4AO75164 1064 aa9.18□□□□□ -0.94
BEST3-205ENST00000488961 GADD45BO75293 160 aaPredicted RBP9.18□□□□□ -0.94
BEST3-205ENST00000488961 ATF3P18847 181 aa9.18□□□□□ -0.94
BEST3-205ENST00000488961 HSP90AB3PQ58FF7 597 aa9.18□□□□□ -0.94
BEST3-205ENST00000488961 PRPF40BQ6NWY9 871 aaKnown RBP9.18□□□□□ -0.94
BEST3-205ENST00000488961 FAM173BQ6P4H8 233 aa9.18□□□□□ -0.94
BEST3-205ENST00000488961 CCDC129Q6ZRS4 1044 aa9.18□□□□□ -0.94
BEST3-205ENST00000488961 UBE3BQ7Z3V4 1068 aa9.18□□□□□ -0.94
BEST3-205ENST00000488961 CNPY4Q8N129 248 aa9.18□□□□□ -0.94
BEST3-205ENST00000488961 LRRC2Q9BYS8 371 aa9.18□□□□□ -0.94
BEST3-205ENST00000488961 NOL7Q9UMY1 257 aaKnown RBP9.18□□□□□ -0.94
BEST3-205ENST00000488961 ARHGAP23Q9P227 1491 aa9.18□□□□□ -0.94
BEST3-205ENST00000488961 AKAP4Q5JQC9 854 aa9.18□□□□□ -0.94
BEST3-205ENST00000488961 KAZALD1Q96I82 304 aa9.18□□□□□ -0.94
BEST3-205ENST00000488961 ZBTB3Q9H5J0 574 aa9.18□□□□□ -0.94
BEST3-205ENST00000488961 SYCE3A1L190 88 aa9.18□□□□□ -0.94
BEST3-205ENST00000488961 MYCNP04198 464 aaPredicted RBP9.18□□□□□ -0.94
BEST3-205ENST00000488961 FERMT3Q86UX7 667 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms