RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 TIAM2Q8IVF5 1701 aa21.17■□□□□ 0.98
ERGIC3-217ENST00000488935 TAF7Q15545 349 aaPredicted RBP21.15■□□□□ 0.98
ERGIC3-217ENST00000488935 HLFQ16534 295 aa21.15■□□□□ 0.98
ERGIC3-217ENST00000488935 WDR90Q96KV7 1748 aa21.15■□□□□ 0.98
ERGIC3-217ENST00000488935 TNRC6CQ9HCJ0 1690 aaKnown RBP21.15■□□□□ 0.98
ERGIC3-217ENST00000488935 GLTPD2A6NH11 291 aa21.14■□□□□ 0.97
ERGIC3-217ENST00000488935 ST5P78524 1137 aa21.14■□□□□ 0.97
ERGIC3-217ENST00000488935 NBPF5PQ86XG9 351 aaPredicted RBP21.14■□□□□ 0.97
ERGIC3-217ENST00000488935 FER1L6Q2WGJ9 1857 aa21.13■□□□□ 0.97
ERGIC3-217ENST00000488935 OLFM4Q6UX06 510 aa21.13■□□□□ 0.97
ERGIC3-217ENST00000488935 POTECB2RU33 542 aa21.12■□□□□ 0.97
ERGIC3-217ENST00000488935 SRGNP10124 158 aa21.12■□□□□ 0.97
ERGIC3-217ENST00000488935 IFFO2Q5TF58 517 aa21.12■□□□□ 0.97
ERGIC3-217ENST00000488935 PRPF40BQ6NWY9 871 aaKnown RBP21.12■□□□□ 0.97
ERGIC3-217ENST00000488935 NIP7Q9Y221 180 aaKnown RBP eCLIP21.12■□□□□ 0.97
ERGIC3-217ENST00000488935 ERFEQ4G0M1 354 aa21.11■□□□□ 0.97
ERGIC3-217ENST00000488935 PLEKHF1Q96S99 279 aa21.11■□□□□ 0.97
ERGIC3-217ENST00000488935 HTATSF1O43719 755 aaKnown RBP21.1■□□□□ 0.97
ERGIC3-217ENST00000488935 FSTL1Q12841 308 aa21.1■□□□□ 0.97
ERGIC3-217ENST00000488935 RRP7AQ9Y3A4 280 aaKnown RBP21.1■□□□□ 0.97
ERGIC3-217ENST00000488935 DICER1Q9UPY3 1922 aaKnown RBP21.1■□□□□ 0.97
ERGIC3-217ENST00000488935 VEGFAP15692 232 aaPredicted RBP21.09■□□□□ 0.97
ERGIC3-217ENST00000488935 CNKSR1Q969H4 720 aa21.09■□□□□ 0.97
ERGIC3-217ENST00000488935 MASTLQ96GX5 879 aa21.09■□□□□ 0.97
ERGIC3-217ENST00000488935 STYK1Q6J9G0 422 aa21.08■□□□□ 0.97
ERGIC3-217ENST00000488935 TTLL7Q6ZT98 887 aa21.08■□□□□ 0.97
ERGIC3-217ENST00000488935 SMC1BQ8NDV3 1235 aa21.08■□□□□ 0.97
ERGIC3-217ENST00000488935 TAOK3Q9H2K8 898 aa21.08■□□□□ 0.97
ERGIC3-217ENST00000488935 DDNO94850 711 aaPredicted RBP21.07■□□□□ 0.96
ERGIC3-217ENST00000488935 MYL6BP14649 208 aa21.07■□□□□ 0.96
ERGIC3-217ENST00000488935 NFE2L2Q16236 605 aa21.07■□□□□ 0.96
ERGIC3-217ENST00000488935 CLEC4GQ6UXB4 293 aa21.07■□□□□ 0.96
ERGIC3-217ENST00000488935 ZNF652Q9Y2D9 606 aa21.07■□□□□ 0.96
ERGIC3-217ENST00000488935 KDM3BQ7LBC6 1761 aa21.06■□□□□ 0.96
ERGIC3-217ENST00000488935 NEFMP07197 916 aa21.06■□□□□ 0.96
ERGIC3-217ENST00000488935 POTEIP0CG38 1075 aa21.06■□□□□ 0.96
ERGIC3-217ENST00000488935 POTEJP0CG39 1038 aa21.06■□□□□ 0.96
ERGIC3-217ENST00000488935 EIF4A1P60842 406 aaKnown RBP21.06■□□□□ 0.96
ERGIC3-217ENST00000488935 SLC51AQ86UW1 340 aa21.06■□□□□ 0.96
ERGIC3-217ENST00000488935 NUTM1Q86Y26 1132 aa21.06■□□□□ 0.96
ERGIC3-217ENST00000488935 KLRG1Q96E93 195 aa21.06■□□□□ 0.96
ERGIC3-217ENST00000488935 PDZRN3Q9UPQ7 1066 aa21.06■□□□□ 0.96
ERGIC3-217ENST00000488935 ZC3H4Q9UPT8 1303 aaKnown RBP21.05■□□□□ 0.96
ERGIC3-217ENST00000488935 DPY19L2Q6NUT2 758 aa21.05■□□□□ 0.96
ERGIC3-217ENST00000488935 C7orf43Q8WVR3 580 aa21.05■□□□□ 0.96
ERGIC3-217ENST00000488935 LAMB4A4D0S4 1761 aa21.05■□□□□ 0.96
ERGIC3-217ENST00000488935 NUP98P52948 1817 aa21.04■□□□□ 0.96
ERGIC3-217ENST00000488935 GPTP24298 496 aa21.04■□□□□ 0.96
ERGIC3-217ENST00000488935 TPTE2Q6XPS3 522 aa21.04■□□□□ 0.96
ERGIC3-217ENST00000488935 ZBTB3Q9H5J0 574 aa21.04■□□□□ 0.96
ERGIC3-217ENST00000488935 ZNF277Q9NRM2 450 aaPredicted RBP21.04■□□□□ 0.96
ERGIC3-217ENST00000488935 ARFGEF2Q9Y6D5 1785 aa21.04■□□□□ 0.96
ERGIC3-217ENST00000488935 GTF2E1P29083 439 aaPredicted RBP21.03■□□□□ 0.96
ERGIC3-217ENST00000488935 ABCC12Q96J65 1359 aa21.02■□□□□ 0.96
ERGIC3-217ENST00000488935 NPR1P16066 1061 aa21.02■□□□□ 0.96
ERGIC3-217ENST00000488935 PCNTO95613 3336 aa21.01■□□□□ 0.95
ERGIC3-217ENST00000488935 ANXA1P04083 346 aa21.01■□□□□ 0.95
ERGIC3-217ENST00000488935 MAPK8IP3Q9UPT6 1336 aa21.01■□□□□ 0.95
ERGIC3-217ENST00000488935 TCERG1O14776 1098 aaKnown RBP21■□□□□ 0.95
ERGIC3-217ENST00000488935 EIF2S2P20042 333 aaKnown RBP21■□□□□ 0.95
ERGIC3-217ENST00000488935 PNISRQ8TF01 805 aaKnown RBP21■□□□□ 0.95
ERGIC3-217ENST00000488935 NECTIN2Q92692 538 aa21■□□□□ 0.95
ERGIC3-217ENST00000488935 LTBP3Q9NS15 1303 aa21■□□□□ 0.95
ERGIC3-217ENST00000488935 KLRG2A4D1S0 409 aaPredicted RBP20.99■□□□□ 0.95
ERGIC3-217ENST00000488935 RIPK4P57078 832 aa20.99■□□□□ 0.95
ERGIC3-217ENST00000488935 DDX10Q13206 875 aaKnown RBP20.99■□□□□ 0.95
ERGIC3-217ENST00000488935 CCDC93Q567U6 631 aa20.99■□□□□ 0.95
ERGIC3-217ENST00000488935 CCDC146Q8IYE0 955 aa20.99■□□□□ 0.95
ERGIC3-217ENST00000488935 ZNF428Q96B54 188 aa20.99■□□□□ 0.95
ERGIC3-217ENST00000488935 MAP3K15Q6ZN16 1313 aa20.99■□□□□ 0.95
ERGIC3-217ENST00000488935 UBN2Q6ZU65 1347 aa20.99■□□□□ 0.95
ERGIC3-217ENST00000488935 ZNF541Q9H0D2 1346 aa20.99■□□□□ 0.95
ERGIC3-217ENST00000488935 NEUROD2Q15784 382 aa20.98■□□□□ 0.95
ERGIC3-217ENST00000488935 SUSD4Q5VX71 490 aa20.98■□□□□ 0.95
ERGIC3-217ENST00000488935 TSPYL4Q9UJ04 414 aa20.98■□□□□ 0.95
ERGIC3-217ENST00000488935 PROSER3Q2NL68 480 aa20.97■□□□□ 0.95
ERGIC3-217ENST00000488935 KIF6Q6ZMV9 814 aa20.97■□□□□ 0.95
ERGIC3-217ENST00000488935 C3orf67Q6ZVT6 689 aa20.97■□□□□ 0.95
ERGIC3-217ENST00000488935 FKBP4Q02790 459 aaKnown RBP eCLIP20.96■□□□□ 0.95
ERGIC3-217ENST00000488935 SOGA3Q5TF21 947 aa20.96■□□□□ 0.95
ERGIC3-217ENST00000488935 SYNE4Q8N205 404 aa20.96■□□□□ 0.95
ERGIC3-217ENST00000488935 JMYQ8N9B5 988 aa20.96■□□□□ 0.95
ERGIC3-217ENST00000488935 ERVV-1B6SEH8 477 aa20.95■□□□□ 0.94
ERGIC3-217ENST00000488935 KRT24Q2M2I5 525 aa20.95■□□□□ 0.94
ERGIC3-217ENST00000488935 COL13A1Q5TAT6 717 aaPredicted RBP20.95■□□□□ 0.94
ERGIC3-217ENST00000488935 PDIA6Q15084 440 aa20.94■□□□□ 0.94
ERGIC3-217ENST00000488935 TMPOP42166 694 aaKnown RBP20.93■□□□□ 0.94
ERGIC3-217ENST00000488935 EAPPQ56P03 285 aaPredicted RBP20.93■□□□□ 0.94
ERGIC3-217ENST00000488935 CHADLQ6NUI6 762 aa20.93■□□□□ 0.94
ERGIC3-217ENST00000488935 ALDH1B1P30837 517 aa20.92■□□□□ 0.94
ERGIC3-217ENST00000488935 AIMP1Q12904 312 aaKnown RBP20.92■□□□□ 0.94
ERGIC3-217ENST00000488935 ZNF34Q8IZ26 560 aa20.92■□□□□ 0.94
ERGIC3-217ENST00000488935 NYXQ9GZU5 481 aa20.92■□□□□ 0.94
ERGIC3-217ENST00000488935 PNNQ9H307 717 aaKnown RBP20.92■□□□□ 0.94
ERGIC3-217ENST00000488935 LAS1LQ9Y4W2 734 aaKnown RBP20.92■□□□□ 0.94
ERGIC3-217ENST00000488935 IARSP41252 1262 aaKnown RBP20.91■□□□□ 0.94
ERGIC3-217ENST00000488935 CRY2Q49AN0 593 aa20.91■□□□□ 0.94
ERGIC3-217ENST00000488935 LRP10Q7Z4F1 713 aa20.91■□□□□ 0.94
ERGIC3-217ENST00000488935 RTKN2Q8IZC4 609 aa20.91■□□□□ 0.94
ERGIC3-217ENST00000488935 RPGRQ92834 1020 aaKnown RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms