RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 PRKRIP1Q9H875 184 aaPredicted RBP15.69■□□□□ 0.1
CCHCR1-215ENST00000488920 PDZRN3Q9UPQ7 1066 aa15.69■□□□□ 0.1
CCHCR1-215ENST00000488920 BRCA1P38398 1863 aaKnown RBP15.69■□□□□ 0.1
CCHCR1-215ENST00000488920 SCN7AQ01118 1682 aa15.68■□□□□ 0.1
CCHCR1-215ENST00000488920 LMOD3Q0VAK6 560 aa15.68■□□□□ 0.1
CCHCR1-215ENST00000488920 RUNDC1Q96C34 613 aa15.68■□□□□ 0.1
CCHCR1-215ENST00000488920 NMRK2Q9NPI5 230 aa15.68■□□□□ 0.1
CCHCR1-215ENST00000488920 C21orf2O43822 256 aa15.67■□□□□ 0.1
CCHCR1-215ENST00000488920 SRGNP10124 158 aa15.67■□□□□ 0.1
CCHCR1-215ENST00000488920 PRELPP51888 382 aa15.67■□□□□ 0.1
CCHCR1-215ENST00000488920 TPTE2Q6XPS3 522 aa15.67■□□□□ 0.1
CCHCR1-215ENST00000488920 TTLL7Q6ZT98 887 aa15.67■□□□□ 0.1
CCHCR1-215ENST00000488920 RGL2O15211 777 aa15.66■□□□□ 0.1
CCHCR1-215ENST00000488920 EIF2S2P20042 333 aaKnown RBP15.66■□□□□ 0.1
CCHCR1-215ENST00000488920 STYK1Q6J9G0 422 aa15.66■□□□□ 0.1
CCHCR1-215ENST00000488920 DLG5Q8TDM6 1919 aa15.66■□□□□ 0.1
CCHCR1-215ENST00000488920 ERVV-1B6SEH8 477 aa15.65■□□□□ 0.1
CCHCR1-215ENST00000488920 NFKBIEO00221 500 aa15.65■□□□□ 0.1
CCHCR1-215ENST00000488920 LMNB1P20700 586 aa15.65■□□□□ 0.1
CCHCR1-215ENST00000488920 KIF6Q6ZMV9 814 aa15.65■□□□□ 0.1
CCHCR1-215ENST00000488920 CNKSR1Q969H4 720 aa15.65■□□□□ 0.1
CCHCR1-215ENST00000488920 MASTLQ96GX5 879 aa15.65■□□□□ 0.1
CCHCR1-215ENST00000488920 ZBTB3Q9H5J0 574 aa15.65■□□□□ 0.1
CCHCR1-215ENST00000488920 BABAM1Q9NWV8 329 aa15.65■□□□□ 0.1
CCHCR1-215ENST00000488920 TRIM35Q9UPQ4 493 aa15.65■□□□□ 0.1
CCHCR1-215ENST00000488920 LAS1LQ9Y4W2 734 aaKnown RBP15.65■□□□□ 0.1
CCHCR1-215ENST00000488920 ARFGEF1Q9Y6D6 1849 aa15.65■□□□□ 0.1
CCHCR1-215ENST00000488920 MAP3K15Q6ZN16 1313 aa15.65■□□□□ 0.1
CCHCR1-215ENST00000488920 GTF2E1P29083 439 aaPredicted RBP15.64■□□□□ 0.09
CCHCR1-215ENST00000488920 CHL1O00533 1208 aa15.63■□□□□ 0.09
CCHCR1-215ENST00000488920 PRPF40BQ6NWY9 871 aaKnown RBP15.63■□□□□ 0.09
CCHCR1-215ENST00000488920 NECTIN2Q92692 538 aa15.63■□□□□ 0.09
CCHCR1-215ENST00000488920 RRAGCQ9HB90 399 aa15.63■□□□□ 0.09
CCHCR1-215ENST00000488920 KDM2BQ8NHM5 1336 aa15.63■□□□□ 0.09
CCHCR1-215ENST00000488920 KDM3BQ7LBC6 1761 aa15.62■□□□□ 0.09
CCHCR1-215ENST00000488920 KLRG2A4D1S0 409 aaPredicted RBP15.62■□□□□ 0.09
CCHCR1-215ENST00000488920 TOMM70O94826 608 aa15.62■□□□□ 0.09
CCHCR1-215ENST00000488920 ANXA1P04083 346 aa15.62■□□□□ 0.09
CCHCR1-215ENST00000488920 NPR1P16066 1061 aa15.62■□□□□ 0.09
CCHCR1-215ENST00000488920 GPTP24298 496 aa15.62■□□□□ 0.09
CCHCR1-215ENST00000488920 PDIA6Q15084 440 aa15.62■□□□□ 0.09
CCHCR1-215ENST00000488920 KRT24Q2M2I5 525 aa15.62■□□□□ 0.09
CCHCR1-215ENST00000488920 PROSER3Q2NL68 480 aa15.62■□□□□ 0.09
CCHCR1-215ENST00000488920 NUTM1Q86Y26 1132 aa15.62■□□□□ 0.09
CCHCR1-215ENST00000488920 ERBB4Q15303 1308 aa15.62■□□□□ 0.09
CCHCR1-215ENST00000488920 ANKRD31Q8N7Z5 1873 aa15.61■□□□□ 0.09
CCHCR1-215ENST00000488920 HSPA6P17066 643 aa15.61■□□□□ 0.09
CCHCR1-215ENST00000488920 ZEB1P37275 1124 aaPredicted RBP15.61■□□□□ 0.09
CCHCR1-215ENST00000488920 LRP10Q7Z4F1 713 aa15.61■□□□□ 0.09
CCHCR1-215ENST00000488920 BCORQ6W2J9 1755 aa15.61■□□□□ 0.09
CCHCR1-215ENST00000488920 ERFEQ4G0M1 354 aa15.6■□□□□ 0.09
CCHCR1-215ENST00000488920 SUSD4Q5VX71 490 aa15.6■□□□□ 0.09
CCHCR1-215ENST00000488920 C16orf71Q8IYS4 520 aaPredicted RBP15.6■□□□□ 0.09
CCHCR1-215ENST00000488920 NYXQ9GZU5 481 aa15.6■□□□□ 0.09
CCHCR1-215ENST00000488920 APAF1O14727 1248 aa15.59■□□□□ 0.09
CCHCR1-215ENST00000488920 GIGYF2Q6Y7W6 1299 aaKnown RBP15.59■□□□□ 0.09
CCHCR1-215ENST00000488920 ZNF34Q8IZ26 560 aa15.59■□□□□ 0.09
CCHCR1-215ENST00000488920 C7orf43Q8WVR3 580 aa15.59■□□□□ 0.09
CCHCR1-215ENST00000488920 TAOK3Q9H2K8 898 aa15.59■□□□□ 0.09
CCHCR1-215ENST00000488920 UBN2Q6ZU65 1347 aa15.59■□□□□ 0.09
CCHCR1-215ENST00000488920 ZC3H4Q9UPT8 1303 aaKnown RBP15.59■□□□□ 0.09
CCHCR1-215ENST00000488920 DLEC1Q9Y238 1755 aa15.59■□□□□ 0.09
CCHCR1-215ENST00000488920 CEP350Q5VT06 3117 aa15.59■□□□□ 0.09
CCHCR1-215ENST00000488920 LAMB4A4D0S4 1761 aa15.58■□□□□ 0.08
CCHCR1-215ENST00000488920 GLTPD2A6NH11 291 aa15.58■□□□□ 0.08
CCHCR1-215ENST00000488920 AIMP1Q12904 312 aaKnown RBP15.58■□□□□ 0.08
CCHCR1-215ENST00000488920 SOGA3Q5TF21 947 aa15.58■□□□□ 0.08
CCHCR1-215ENST00000488920 OLFM4Q6UX06 510 aa15.58■□□□□ 0.08
CCHCR1-215ENST00000488920 COPS6Q7L5N1 327 aa15.58■□□□□ 0.08
CCHCR1-215ENST00000488920 COL11A2P13942 1736 aaPredicted RBP15.57■□□□□ 0.08
CCHCR1-215ENST00000488920 RBM46Q8TBY0 533 aaKnown RBP15.57■□□□□ 0.08
CCHCR1-215ENST00000488920 XAGE3Q8WTP9 111 aa15.57■□□□□ 0.08
CCHCR1-215ENST00000488920 ABCC12Q96J65 1359 aa15.57■□□□□ 0.08
CCHCR1-215ENST00000488920 ALDH1B1P30837 517 aa15.56■□□□□ 0.08
CCHCR1-215ENST00000488920 CCDC184Q52MB2 194 aa15.56■□□□□ 0.08
CCHCR1-215ENST00000488920 CCDC93Q567U6 631 aa15.56■□□□□ 0.08
CCHCR1-215ENST00000488920 CFAP44Q96MT7 982 aa15.56■□□□□ 0.08
CCHCR1-215ENST00000488920 DDX21Q9NR30 783 aaKnown RBP eCLIP15.56■□□□□ 0.08
CCHCR1-215ENST00000488920 LTBP3Q9NS15 1303 aa15.56■□□□□ 0.08
CCHCR1-215ENST00000488920 SBF1O95248 1867 aa15.55■□□□□ 0.08
CCHCR1-215ENST00000488920 SLX4Q8IY92 1834 aa15.55■□□□□ 0.08
CCHCR1-215ENST00000488920 NTSR2O95665 410 aa15.55■□□□□ 0.08
CCHCR1-215ENST00000488920 VEGFAP15692 232 aaPredicted RBP15.55■□□□□ 0.08
CCHCR1-215ENST00000488920 CRY2Q49AN0 593 aa15.55■□□□□ 0.08
CCHCR1-215ENST00000488920 DPY19L2Q6NUT2 758 aa15.55■□□□□ 0.08
CCHCR1-215ENST00000488920 PPP1R42Q7Z4L9 355 aa15.55■□□□□ 0.08
CCHCR1-215ENST00000488920 MBIPQ9NS73 344 aa15.55■□□□□ 0.08
CCHCR1-215ENST00000488920 CHPF2Q9P2E5 772 aa15.55■□□□□ 0.08
CCHCR1-215ENST00000488920 PARP10Q53GL7 1025 aa15.54■□□□□ 0.08
CCHCR1-215ENST00000488920 HDGFL1Q5TGJ6 251 aa15.54■□□□□ 0.08
CCHCR1-215ENST00000488920 DUSP27Q5VZP5 1158 aa15.54■□□□□ 0.08
CCHCR1-215ENST00000488920 C3orf67Q6ZVT6 689 aa15.54■□□□□ 0.08
CCHCR1-215ENST00000488920 RPGRQ92834 1020 aaKnown RBP15.54■□□□□ 0.08
CCHCR1-215ENST00000488920 UTP14AQ9BVJ6 771 aaKnown RBP15.54■□□□□ 0.08
CCHCR1-215ENST00000488920 ZNF853P0CG23 659 aa15.53■□□□□ 0.08
CCHCR1-215ENST00000488920 FKBP4Q02790 459 aaKnown RBP eCLIP15.53■□□□□ 0.08
CCHCR1-215ENST00000488920 RTKN2Q8IZC4 609 aa15.53■□□□□ 0.08
CCHCR1-215ENST00000488920 ZNF277Q9NRM2 450 aaPredicted RBP15.53■□□□□ 0.08
CCHCR1-215ENST00000488920 IBTKQ9P2D0 1353 aaPredicted RBP15.52■□□□□ 0.08
CCHCR1-215ENST00000488920 ZNF316A6NFI3 1004 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms