RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 FAM182BQ5T319 152 aa9.57□□□□□ -0.88
CTNNB1-215ENST00000488914 KANK4Q5T7N3 995 aaPredicted RBP9.57□□□□□ -0.88
CTNNB1-215ENST00000488914 SAMD5Q5TGI4 173 aa9.57□□□□□ -0.88
CTNNB1-215ENST00000488914 PODNQ7Z5L7 613 aa9.57□□□□□ -0.88
CTNNB1-215ENST00000488914 BTBD6Q96KE9 485 aa9.57□□□□□ -0.88
CTNNB1-215ENST00000488914 M0R2N6 131 aa9.56□□□□□ -0.88
CTNNB1-215ENST00000488914 PCBP4P57723 403 aaKnown RBP9.56□□□□□ -0.88
CTNNB1-215ENST00000488914 PSMA6P60900 246 aaKnown RBP9.56□□□□□ -0.88
CTNNB1-215ENST00000488914 CRTC2Q53ET0 693 aaPredicted RBP9.56□□□□□ -0.88
CTNNB1-215ENST00000488914 FCHSD1Q86WN1 690 aa9.56□□□□□ -0.88
CTNNB1-215ENST00000488914 AMPD1P23109 780 aa9.55□□□□□ -0.88
CTNNB1-215ENST00000488914 POTEAQ6S8J7 498 aa9.55□□□□□ -0.88
CTNNB1-215ENST00000488914 LINC00114Q6XXX2 140 aa9.55□□□□□ -0.88
CTNNB1-215ENST00000488914 RHPN1Q8TCX5 695 aa9.55□□□□□ -0.88
CTNNB1-215ENST00000488914 HSH2DQ96JZ2 352 aa9.55□□□□□ -0.88
CTNNB1-215ENST00000488914 PHACTR1Q9C0D0 580 aa9.55□□□□□ -0.88
CTNNB1-215ENST00000488914 MARK1Q9P0L2 795 aa9.55□□□□□ -0.88
CTNNB1-215ENST00000488914 COL8A1P27658 744 aa9.54□□□□□ -0.88
CTNNB1-215ENST00000488914 SFSWAPQ12872 951 aaKnown RBP9.54□□□□□ -0.88
CTNNB1-215ENST00000488914 ZNF280CQ8ND82 737 aa9.54□□□□□ -0.88
CTNNB1-215ENST00000488914 SUV39H2Q9H5I1 410 aa9.54□□□□□ -0.88
CTNNB1-215ENST00000488914 ZNF777Q9ULD5 760 aaPredicted RBP9.54□□□□□ -0.88
CTNNB1-215ENST00000488914 PPP1R12BO60237 982 aaPredicted RBP9.53□□□□□ -0.88
CTNNB1-215ENST00000488914 LMOD1P29536 600 aaPredicted RBP9.53□□□□□ -0.88
CTNNB1-215ENST00000488914 SEC13P55735 322 aa9.53□□□□□ -0.88
CTNNB1-215ENST00000488914 PTK7Q13308 1070 aa9.53□□□□□ -0.88
CTNNB1-215ENST00000488914 PLA2G4EQ3MJ16 856 aa9.53□□□□□ -0.88
CTNNB1-215ENST00000488914 SCG3Q8WXD2 468 aaKnown RBP9.53□□□□□ -0.88
CTNNB1-215ENST00000488914 ATAD2Q6PL18 1390 aa9.52□□□□□ -0.88
CTNNB1-215ENST00000488914 ADH6P28332 368 aa9.52□□□□□ -0.89
CTNNB1-215ENST00000488914 HIRAP54198 1017 aaPredicted RBP9.52□□□□□ -0.89
CTNNB1-215ENST00000488914 DPYDQ12882 1025 aa9.52□□□□□ -0.89
CTNNB1-215ENST00000488914 NEUROD4Q9HD90 331 aa9.52□□□□□ -0.89
CTNNB1-215ENST00000488914 MKL2Q9ULH7 1088 aa9.52□□□□□ -0.89
CTNNB1-215ENST00000488914 PRR12Q9ULL5 1215 aa9.52□□□□□ -0.89
CTNNB1-215ENST00000488914 ZNF468Q5VIY5 522 aaPredicted RBP9.51□□□□□ -0.89
CTNNB1-215ENST00000488914 C1orf53Q5VUE5 145 aa9.51□□□□□ -0.89
CTNNB1-215ENST00000488914 LARP1Q6PKG0 1096 aaKnown RBP9.51□□□□□ -0.89
CTNNB1-215ENST00000488914 CHMP7Q8WUX9 453 aaPredicted RBP9.51□□□□□ -0.89
CTNNB1-215ENST00000488914 SLC30A3Q99726 388 aa9.51□□□□□ -0.89
CTNNB1-215ENST00000488914 RBM19Q9Y4C8 960 aaKnown RBP9.51□□□□□ -0.89
CTNNB1-215ENST00000488914 KRBA1A5PL33 1030 aa9.5□□□□□ -0.89
CTNNB1-215ENST00000488914 LAMC2Q13753 1193 aa9.5□□□□□ -0.89
CTNNB1-215ENST00000488914 CHSY3Q70JA7 882 aa9.5□□□□□ -0.89
CTNNB1-215ENST00000488914 ALDH16A1Q8IZ83 802 aa9.5□□□□□ -0.89
CTNNB1-215ENST00000488914 SUSD3Q96L08 255 aa9.5□□□□□ -0.89
CTNNB1-215ENST00000488914 HINFPQ9BQA5 517 aa9.5□□□□□ -0.89
CTNNB1-215ENST00000488914 C2orf49Q9BVC5 232 aaPredicted RBP9.5□□□□□ -0.89
CTNNB1-215ENST00000488914 USP17L15C9J2P7 530 aa9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 USP17L10C9JJH3 530 aa9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 USP17L13C9JLJ4 530 aa9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 USP17L12C9JPN9 530 aa9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 USP17L11C9JVI0 530 aa9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 USP17L21D6R901 530 aa9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 USP17L18D6R9N7 530 aa9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 USP17L22D6RA61 530 aa9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 USP17L17D6RBQ6 530 aa9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 USP17L19D6RCP7 530 aa9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 USP17L20D6RJB6 530 aa9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 DGKGP49619 791 aa9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 USP17L24Q0WX57 530 aa9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 SUZ12Q15022 739 aaKnown RBP9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 CDCA8Q53HL2 280 aa9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 CFAP70Q5T0N1 1121 aa9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 SYT9Q86SS6 491 aa9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 NGLY1Q96IV0 654 aa9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 AVENQ9NQS1 362 aaPredicted RBP9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 GPC6Q9Y625 555 aaPredicted RBP9.49□□□□□ -0.89
CTNNB1-215ENST00000488914 RAB44Q7Z6P3 723 aaPredicted RBP9.48□□□□□ -0.89
CTNNB1-215ENST00000488914 ANKMY2Q8IV38 441 aa9.48□□□□□ -0.89
CTNNB1-215ENST00000488914 CEP63Q96MT8 703 aa9.48□□□□□ -0.89
CTNNB1-215ENST00000488914 VRTNQ9H8Y1 702 aa9.48□□□□□ -0.89
CTNNB1-215ENST00000488914 CHMP3Q9Y3E7 222 aa9.48□□□□□ -0.89
CTNNB1-215ENST00000488914 ARXQ96QS3 562 aa9.47□□□□□ -0.89
CTNNB1-215ENST00000488914 IGHA1P01876 353 aa9.46□□□□□ -0.9
CTNNB1-215ENST00000488914 TYRO3Q06418 890 aa9.46□□□□□ -0.9
CTNNB1-215ENST00000488914 STAG2Q8N3U4 1231 aa9.46□□□□□ -0.9
CTNNB1-215ENST00000488914 MDFIQ99750 246 aa9.46□□□□□ -0.9
CTNNB1-215ENST00000488914 SPOCK3Q9BQ16 436 aa9.46□□□□□ -0.9
CTNNB1-215ENST00000488914 BRD7Q9NPI1 651 aa9.46□□□□□ -0.9
CTNNB1-215ENST00000488914 FAM196BA6NMK8 535 aa9.45□□□□□ -0.9
CTNNB1-215ENST00000488914 PROCP04070 461 aa9.45□□□□□ -0.9
CTNNB1-215ENST00000488914 RFX1P22670 979 aa9.44□□□□□ -0.9
CTNNB1-215ENST00000488914 SPEM2Q0P670 501 aa9.44□□□□□ -0.9
CTNNB1-215ENST00000488914 ANKIB1Q9P2G1 1089 aa9.44□□□□□ -0.9
CTNNB1-215ENST00000488914 BCS1LQ9Y276 419 aa9.44□□□□□ -0.9
CTNNB1-215ENST00000488914 ELOA3CA0A087WX78 387 aaPredicted RBP9.43□□□□□ -0.9
CTNNB1-215ENST00000488914 ELOA3DA6NLF2 546 aaPredicted RBP9.43□□□□□ -0.9
CTNNB1-215ENST00000488914 GNB5O14775 395 aa9.43□□□□□ -0.9
CTNNB1-215ENST00000488914 MSTNO14793 375 aa9.43□□□□□ -0.9
CTNNB1-215ENST00000488914 ELOA3BQ3SY89 546 aa9.43□□□□□ -0.9
CTNNB1-215ENST00000488914 ELOA3Q8NG57 546 aa9.43□□□□□ -0.9
CTNNB1-215ENST00000488914 TRIM11Q96F44 468 aa9.43□□□□□ -0.9
CTNNB1-215ENST00000488914 KCNH4Q9UQ05 1017 aa9.43□□□□□ -0.9
CTNNB1-215ENST00000488914 SIN3BO75182 1162 aa9.42□□□□□ -0.9
CTNNB1-215ENST00000488914 BTLAQ7Z6A9 289 aa9.42□□□□□ -0.9
CTNNB1-215ENST00000488914 IGFBP4P22692 258 aa9.41□□□□□ -0.9
CTNNB1-215ENST00000488914 KCNQ4P56696 695 aa9.41□□□□□ -0.9
CTNNB1-215ENST00000488914 STARD13Q9Y3M8 1113 aa9.41□□□□□ -0.9
CTNNB1-215ENST00000488914 ADARB2-AS1A8MUL3 147 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms