RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 RRP1P56182 461 aaKnown RBP15.69■□□□□ 0.1
TRAIP-209ENST00000488860 SLC15A2Q16348 729 aa15.69■□□□□ 0.1
TRAIP-209ENST00000488860 ZKSCAN2Q63HK3 967 aa15.69■□□□□ 0.1
TRAIP-209ENST00000488860 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.69■□□□□ 0.1
TRAIP-209ENST00000488860 SUPT16HQ9Y5B9 1047 aaKnown RBP15.69■□□□□ 0.1
TRAIP-209ENST00000488860 CASZ1Q86V15 1759 aa15.68■□□□□ 0.1
TRAIP-209ENST00000488860 ADCY9O60503 1353 aa15.68■□□□□ 0.1
TRAIP-209ENST00000488860 IPO8O15397 1037 aaKnown RBP15.68■□□□□ 0.1
TRAIP-209ENST00000488860 RFC4P35249 363 aa15.68■□□□□ 0.1
TRAIP-209ENST00000488860 BRPF1P55201 1214 aaPredicted RBP15.68■□□□□ 0.1
TRAIP-209ENST00000488860 TRAPPC3LQ5T215 181 aa15.68■□□□□ 0.1
TRAIP-209ENST00000488860 RIC3Q7Z5B4 369 aa15.68■□□□□ 0.1
TRAIP-209ENST00000488860 MAP3K15Q6ZN16 1313 aa15.68■□□□□ 0.1
TRAIP-209ENST00000488860 PNPLA7Q6ZV29 1317 aa15.68■□□□□ 0.1
TRAIP-209ENST00000488860 PXDNLA1KZ92 1463 aa15.67■□□□□ 0.1
TRAIP-209ENST00000488860 F6X3S4 739 aa15.67■□□□□ 0.1
TRAIP-209ENST00000488860 ADRA2BP18089 450 aa15.67■□□□□ 0.1
TRAIP-209ENST00000488860 ATF7IPQ6VMQ6 1270 aa15.67■□□□□ 0.1
TRAIP-209ENST00000488860 ARHGEF1Q92888 912 aaKnown RBP15.67■□□□□ 0.1
TRAIP-209ENST00000488860 API5Q9BZZ5 524 aaKnown RBP15.67■□□□□ 0.1
TRAIP-209ENST00000488860 SRP68Q9UHB9 627 aaKnown RBP15.67■□□□□ 0.1
TRAIP-209ENST00000488860 TNNQ9UQP3 1299 aa15.67■□□□□ 0.1
TRAIP-209ENST00000488860 MAP3K2Q9Y2U5 619 aa15.67■□□□□ 0.1
TRAIP-209ENST00000488860 PI4KAP2A4QPH2 592 aa15.66■□□□□ 0.1
TRAIP-209ENST00000488860 ZPR1O75312 459 aa15.66■□□□□ 0.1
TRAIP-209ENST00000488860 SLC4A10Q6U841 1118 aa15.66■□□□□ 0.1
TRAIP-209ENST00000488860 ANKRD13DQ6ZTN6 518 aa15.66■□□□□ 0.1
TRAIP-209ENST00000488860 FTSJ3Q8IY81 847 aaKnown RBP15.66■□□□□ 0.1
TRAIP-209ENST00000488860 PI4KAP1Q8N8J0 262 aa15.66■□□□□ 0.1
TRAIP-209ENST00000488860 PLBD2Q8NHP8 589 aa15.66■□□□□ 0.1
TRAIP-209ENST00000488860 CLUAP1Q96AJ1 413 aa15.66■□□□□ 0.1
TRAIP-209ENST00000488860 USP42Q9H9J4 1324 aaKnown RBP15.66■□□□□ 0.1
TRAIP-209ENST00000488860 COL24A1Q17RW2 1714 aa15.65■□□□□ 0.1
TRAIP-209ENST00000488860 CAMTA2O94983 1202 aa15.65■□□□□ 0.1
TRAIP-209ENST00000488860 TRIM27P14373 513 aa15.65■□□□□ 0.1
TRAIP-209ENST00000488860 USPL1Q5W0Q7 1092 aa15.65■□□□□ 0.1
TRAIP-209ENST00000488860 KSR2Q6VAB6 950 aa15.65■□□□□ 0.1
TRAIP-209ENST00000488860 COL23A1Q86Y22 540 aaPredicted RBP15.65■□□□□ 0.1
TRAIP-209ENST00000488860 FLAD1Q8NFF5 587 aa15.65■□□□□ 0.1
TRAIP-209ENST00000488860 DNAAF4Q8WXU2 420 aa15.65■□□□□ 0.1
TRAIP-209ENST00000488860 HLFQ16534 295 aa15.64■□□□□ 0.09
TRAIP-209ENST00000488860 ARHGAP45Q92619 1136 aa15.64■□□□□ 0.09
TRAIP-209ENST00000488860 MYD88Q99836 296 aa15.64■□□□□ 0.09
TRAIP-209ENST00000488860 NARFQ9UHQ1 456 aa15.64■□□□□ 0.09
TRAIP-209ENST00000488860 ZNF652Q9Y2D9 606 aa15.64■□□□□ 0.09
TRAIP-209ENST00000488860 R3HDM1Q15032 1099 aaKnown RBP15.63■□□□□ 0.09
TRAIP-209ENST00000488860 DZIP1LQ8IYY4 767 aaKnown RBP15.63■□□□□ 0.09
TRAIP-209ENST00000488860 ABCC4O15439 1325 aa15.63■□□□□ 0.09
TRAIP-209ENST00000488860 ERVV-1B6SEH8 477 aa15.62■□□□□ 0.09
TRAIP-209ENST00000488860 NEXNQ0ZGT2 675 aa15.62■□□□□ 0.09
TRAIP-209ENST00000488860 GIGYF2Q6Y7W6 1299 aaKnown RBP15.62■□□□□ 0.09
TRAIP-209ENST00000488860 PANK1Q8TE04 598 aa15.62■□□□□ 0.09
TRAIP-209ENST00000488860 ATP10DQ9P241 1426 aa15.61■□□□□ 0.09
TRAIP-209ENST00000488860 PSDA5PKW4 1024 aaPredicted RBP15.61■□□□□ 0.09
TRAIP-209ENST00000488860 ATP5J2-PTCD1G3V325 749 aa15.61■□□□□ 0.09
TRAIP-209ENST00000488860 MS4A1P11836 297 aa15.61■□□□□ 0.09
TRAIP-209ENST00000488860 GPTP24298 496 aa15.61■□□□□ 0.09
TRAIP-209ENST00000488860 C20orf194Q5TEA3 1177 aa15.61■□□□□ 0.09
TRAIP-209ENST00000488860 METTL22Q9BUU2 404 aaPredicted RBP15.61■□□□□ 0.09
TRAIP-209ENST00000488860 LAMB2P55268 1798 aa15.61■□□□□ 0.09
TRAIP-209ENST00000488860 RNF123Q5XPI4 1314 aa15.61■□□□□ 0.09
TRAIP-209ENST00000488860 SOCS7O14512 581 aa15.6■□□□□ 0.09
TRAIP-209ENST00000488860 RLBP1P12271 317 aa15.6■□□□□ 0.09
TRAIP-209ENST00000488860 IRX6P78412 446 aaPredicted RBP15.6■□□□□ 0.09
TRAIP-209ENST00000488860 HSP90AB3PQ58FF7 597 aa15.6■□□□□ 0.09
TRAIP-209ENST00000488860 MSL1Q68DK7 614 aa15.6■□□□□ 0.09
TRAIP-209ENST00000488860 BICDL1Q6ZP65 573 aa15.6■□□□□ 0.09
TRAIP-209ENST00000488860 ITPRIPQ8IWB1 547 aa15.6■□□□□ 0.09
TRAIP-209ENST00000488860 TMEM57Q8N5G2 664 aa15.6■□□□□ 0.09
TRAIP-209ENST00000488860 BCL2L12Q9HB09 334 aa15.6■□□□□ 0.09
TRAIP-209ENST00000488860 MYH3P11055 1940 aa15.6■□□□□ 0.09
TRAIP-209ENST00000488860 GYS1P13807 737 aa15.59■□□□□ 0.09
TRAIP-209ENST00000488860 TCIRG1Q13488 830 aa15.59■□□□□ 0.09
TRAIP-209ENST00000488860 FKBP8Q14318 412 aa15.59■□□□□ 0.09
TRAIP-209ENST00000488860 CWF19L2Q2TBE0 894 aaKnown RBP15.59■□□□□ 0.09
TRAIP-209ENST00000488860 TBC1D9BQ66K14 1250 aa15.59■□□□□ 0.09
TRAIP-209ENST00000488860 SRCIN1Q9C0H9 1055 aa15.59■□□□□ 0.09
TRAIP-209ENST00000488860 PDGFDQ9GZP0 370 aaPredicted RBP15.59■□□□□ 0.09
TRAIP-209ENST00000488860 NIP7Q9Y221 180 aaKnown RBP eCLIP15.59■□□□□ 0.09
TRAIP-209ENST00000488860 FAM177BA6PVY3 158 aa15.58■□□□□ 0.08
TRAIP-209ENST00000488860 CCT4P50991 539 aaKnown RBP15.58■□□□□ 0.08
TRAIP-209ENST00000488860 BEND3Q5T5X7 828 aa15.58■□□□□ 0.08
TRAIP-209ENST00000488860 COG6Q9Y2V7 657 aa15.58■□□□□ 0.08
TRAIP-209ENST00000488860 DDX60Q8IY21 1712 aaKnown RBP15.57■□□□□ 0.08
TRAIP-209ENST00000488860 NEURL1BA8MQ27 555 aa15.57■□□□□ 0.08
TRAIP-209ENST00000488860 IGKV5-2P06315 115 aa15.57■□□□□ 0.08
TRAIP-209ENST00000488860 PDE3AQ14432 1141 aa15.57■□□□□ 0.08
TRAIP-209ENST00000488860 CLEC4GQ6UXB4 293 aa15.57■□□□□ 0.08
TRAIP-209ENST00000488860 LINS1Q8NG48 757 aa15.57■□□□□ 0.08
TRAIP-209ENST00000488860 UBN2Q6ZU65 1347 aa15.57■□□□□ 0.08
TRAIP-209ENST00000488860 NEFLP07196 543 aa15.56■□□□□ 0.08
TRAIP-209ENST00000488860 MVPQ14764 893 aaKnown RBP15.56■□□□□ 0.08
TRAIP-209ENST00000488860 INTS3Q68E01 1043 aaKnown RBP15.56■□□□□ 0.08
TRAIP-209ENST00000488860 CRBNQ96SW2 442 aa15.56■□□□□ 0.08
TRAIP-209ENST00000488860 ISCA1Q9BUE6 129 aa15.56■□□□□ 0.08
TRAIP-209ENST00000488860 CWC25Q9NXE8 425 aaPredicted RBP15.56■□□□□ 0.08
TRAIP-209ENST00000488860 CARMIL3Q8ND23 1372 aa15.56■□□□□ 0.08
TRAIP-209ENST00000488860 NRXN2Q9P2S2 1712 aa15.56■□□□□ 0.08
TRAIP-209ENST00000488860 RGL2O15211 777 aa15.55■□□□□ 0.08
TRAIP-209ENST00000488860 NPHP1O15259 732 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms