RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 NFKBIEO00221 500 aa15.54■□□□□ 0.08
HLA-DOB-209ENST00000488325 SRP68Q9UHB9 627 aaKnown RBP15.54■□□□□ 0.08
HLA-DOB-209ENST00000488325 FANCIQ9NVI1 1328 aa15.53■□□□□ 0.08
HLA-DOB-209ENST00000488325 RRP1P56182 461 aaKnown RBP15.53■□□□□ 0.08
HLA-DOB-209ENST00000488325 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.53■□□□□ 0.08
HLA-DOB-209ENST00000488325 CFAP44Q96MT7 982 aa15.53■□□□□ 0.08
HLA-DOB-209ENST00000488325 COL5A3P25940 1745 aaPredicted RBP15.52■□□□□ 0.08
HLA-DOB-209ENST00000488325 GNAT3A8MTJ3 354 aa15.52■□□□□ 0.08
HLA-DOB-209ENST00000488325 POLRMTO00411 1230 aaKnown RBP15.52■□□□□ 0.08
HLA-DOB-209ENST00000488325 MAP2K1Q02750 393 aaPredicted RBP15.52■□□□□ 0.08
HLA-DOB-209ENST00000488325 RBM42Q9BTD8 480 aaKnown RBP15.52■□□□□ 0.08
HLA-DOB-209ENST00000488325 SPG7Q9UQ90 795 aa15.52■□□□□ 0.08
HLA-DOB-209ENST00000488325 USP42Q9H9J4 1324 aaKnown RBP15.51■□□□□ 0.07
HLA-DOB-209ENST00000488325 LAS1LQ9Y4W2 734 aaKnown RBP15.51■□□□□ 0.07
HLA-DOB-209ENST00000488325 ZNF831Q5JPB2 1677 aa15.51■□□□□ 0.07
HLA-DOB-209ENST00000488325 MYH14Q7Z406 1995 aaKnown RBP15.5■□□□□ 0.07
HLA-DOB-209ENST00000488325 RASSF10A6NK89 507 aa15.5■□□□□ 0.07
HLA-DOB-209ENST00000488325 ZNF853P0CG23 659 aa15.5■□□□□ 0.07
HLA-DOB-209ENST00000488325 ERFEQ4G0M1 354 aa15.5■□□□□ 0.07
HLA-DOB-209ENST00000488325 LDHDQ86WU2 507 aa15.5■□□□□ 0.07
HLA-DOB-209ENST00000488325 TTLL6Q8N841 843 aa15.5■□□□□ 0.07
HLA-DOB-209ENST00000488325 TSR2Q969E8 191 aaKnown RBP15.5■□□□□ 0.07
HLA-DOB-209ENST00000488325 THUMPD2Q9BTF0 503 aaKnown RBP15.5■□□□□ 0.07
HLA-DOB-209ENST00000488325 DDNO94850 711 aaPredicted RBP15.49■□□□□ 0.07
HLA-DOB-209ENST00000488325 TM4SF1P30408 202 aa15.49■□□□□ 0.07
HLA-DOB-209ENST00000488325 DCTN1Q14203 1278 aa15.49■□□□□ 0.07
HLA-DOB-209ENST00000488325 DEFB115Q30KQ5 88 aa15.49■□□□□ 0.07
HLA-DOB-209ENST00000488325 AKAP4Q5JQC9 854 aa15.49■□□□□ 0.07
HLA-DOB-209ENST00000488325 C1orf141Q5JVX7 400 aa15.49■□□□□ 0.07
HLA-DOB-209ENST00000488325 ZNF530Q6P9A1 599 aaPredicted RBP15.49■□□□□ 0.07
HLA-DOB-209ENST00000488325 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.49■□□□□ 0.07
HLA-DOB-209ENST00000488325 WDR33Q9C0J8 1336 aaKnown RBP15.48■□□□□ 0.07
HLA-DOB-209ENST00000488325 ITGBL1O95965 494 aaPredicted RBP15.48■□□□□ 0.07
HLA-DOB-209ENST00000488325 EXOSC9Q06265 439 aaKnown RBP15.48■□□□□ 0.07
HLA-DOB-209ENST00000488325 MCM10Q7L590 875 aa15.48■□□□□ 0.07
HLA-DOB-209ENST00000488325 ZNF428Q96B54 188 aa15.48■□□□□ 0.07
HLA-DOB-209ENST00000488325 DLEC1Q9Y238 1755 aa15.47■□□□□ 0.07
HLA-DOB-209ENST00000488325 PHKG2P15735 406 aa15.47■□□□□ 0.07
HLA-DOB-209ENST00000488325 BABAM1Q9NWV8 329 aa15.47■□□□□ 0.07
HLA-DOB-209ENST00000488325 CHL1O00533 1208 aa15.46■□□□□ 0.07
HLA-DOB-209ENST00000488325 IFNL2Q8IZJ0 200 aa15.46■□□□□ 0.07
HLA-DOB-209ENST00000488325 MBIPQ9NS73 344 aa15.46■□□□□ 0.07
HLA-DOB-209ENST00000488325 DICER1Q9UPY3 1922 aaKnown RBP15.45■□□□□ 0.06
HLA-DOB-209ENST00000488325 IQCA1LA6NCM1 817 aa15.45■□□□□ 0.06
HLA-DOB-209ENST00000488325 CRKLP46109 303 aaKnown RBP15.45■□□□□ 0.06
HLA-DOB-209ENST00000488325 RARSP54136 660 aaKnown RBP15.45■□□□□ 0.06
HLA-DOB-209ENST00000488325 IRX6P78412 446 aaPredicted RBP15.45■□□□□ 0.06
HLA-DOB-209ENST00000488325 TAF1DQ9H5J8 278 aaPredicted RBP15.45■□□□□ 0.06
HLA-DOB-209ENST00000488325 C2CD5Q86YS7 1000 aa15.44■□□□□ 0.06
HLA-DOB-209ENST00000488325 BEGAINQ9BUH8 593 aa15.44■□□□□ 0.06
HLA-DOB-209ENST00000488325 MCOLN1Q9GZU1 580 aa15.44■□□□□ 0.06
HLA-DOB-209ENST00000488325 HSP90AB1P08238 724 aaKnown RBP15.43■□□□□ 0.06
HLA-DOB-209ENST00000488325 CANXP27824 592 aaKnown RBP15.43■□□□□ 0.06
HLA-DOB-209ENST00000488325 TAF7Q15545 349 aaPredicted RBP15.43■□□□□ 0.06
HLA-DOB-209ENST00000488325 ALDH1L2Q3SY69 923 aa15.43■□□□□ 0.06
HLA-DOB-209ENST00000488325 IL17REQ8NFR9 667 aa15.43■□□□□ 0.06
HLA-DOB-209ENST00000488325 TSPYL4Q9UJ04 414 aa15.43■□□□□ 0.06
HLA-DOB-209ENST00000488325 CEMIPQ8WUJ3 1361 aa15.43■□□□□ 0.06
HLA-DOB-209ENST00000488325 AFDNP55196 1824 aaKnown RBP15.43■□□□□ 0.06
HLA-DOB-209ENST00000488325 EAPPQ56P03 285 aaPredicted RBP15.42■□□□□ 0.06
HLA-DOB-209ENST00000488325 USPL1Q5W0Q7 1092 aa15.42■□□□□ 0.06
HLA-DOB-209ENST00000488325 TSKSQ9UJT2 592 aa15.42■□□□□ 0.06
HLA-DOB-209ENST00000488325 ABT1Q9ULW3 272 aaKnown RBP15.42■□□□□ 0.06
HLA-DOB-209ENST00000488325 THSD7BQ9C0I4 1608 aa15.42■□□□□ 0.06
HLA-DOB-209ENST00000488325 NRXN2Q9P2S2 1712 aa15.41■□□□□ 0.06
HLA-DOB-209ENST00000488325 H0YIN7 160 aa15.41■□□□□ 0.06
HLA-DOB-209ENST00000488325 RNMTO43148 476 aaKnown RBP15.41■□□□□ 0.06
HLA-DOB-209ENST00000488325 TEFQ10587 303 aa15.41■□□□□ 0.06
HLA-DOB-209ENST00000488325 NFIXQ14938 502 aa15.41■□□□□ 0.06
HLA-DOB-209ENST00000488325 L3MBTL3Q96JM7 780 aaPredicted RBP15.41■□□□□ 0.06
HLA-DOB-209ENST00000488325 ZNF219Q9P2Y4 722 aaPredicted RBP15.41■□□□□ 0.06
HLA-DOB-209ENST00000488325 ADAMTS7Q9UKP4 1686 aa15.41■□□□□ 0.06
HLA-DOB-209ENST00000488325 SCN4AP35499 1836 aa15.4■□□□□ 0.06
HLA-DOB-209ENST00000488325 FER1L6Q2WGJ9 1857 aa15.4■□□□□ 0.06
HLA-DOB-209ENST00000488325 ERVV-2B6SEH9 535 aa15.4■□□□□ 0.06
HLA-DOB-209ENST00000488325 C21orf2O43822 256 aa15.4■□□□□ 0.06
HLA-DOB-209ENST00000488325 PTCD1O75127 700 aaKnown RBP15.4■□□□□ 0.06
HLA-DOB-209ENST00000488325 ZPR1O75312 459 aa15.4■□□□□ 0.06
HLA-DOB-209ENST00000488325 BCAR3O75815 825 aa15.4■□□□□ 0.06
HLA-DOB-209ENST00000488325 MS4A1P11836 297 aa15.4■□□□□ 0.06
HLA-DOB-209ENST00000488325 TWISTNBQ3B726 338 aaPredicted RBP15.4■□□□□ 0.06
HLA-DOB-209ENST00000488325 SMC4Q9NTJ3 1288 aa15.4■□□□□ 0.06
HLA-DOB-209ENST00000488325 PPP4R2Q9NY27 417 aa15.4■□□□□ 0.06
HLA-DOB-209ENST00000488325 CLEC11AQ9Y240 323 aa15.4■□□□□ 0.06
HLA-DOB-209ENST00000488325 SOS1Q07889 1333 aaPredicted RBP15.4■□□□□ 0.06
HLA-DOB-209ENST00000488325 LTBP3Q9NS15 1303 aa15.4■□□□□ 0.06
HLA-DOB-209ENST00000488325 CARMIL3Q8ND23 1372 aa15.39■□□□□ 0.05
HLA-DOB-209ENST00000488325 PLIN1O60240 522 aa15.39■□□□□ 0.05
HLA-DOB-209ENST00000488325 SERPINB2P05120 415 aa15.39■□□□□ 0.05
HLA-DOB-209ENST00000488325 PRPF38BQ5VTL8 546 aaKnown RBP15.39■□□□□ 0.05
HLA-DOB-209ENST00000488325 CAPNS2Q96L46 248 aa15.39■□□□□ 0.05
HLA-DOB-209ENST00000488325 TAOK3Q9H2K8 898 aa15.39■□□□□ 0.05
HLA-DOB-209ENST00000488325 KIF16BQ96L93 1317 aa15.39■□□□□ 0.05
HLA-DOB-209ENST00000488325 VAMP4O75379 141 aa15.38■□□□□ 0.05
HLA-DOB-209ENST00000488325 PDE3AQ14432 1141 aa15.38■□□□□ 0.05
HLA-DOB-209ENST00000488325 MAP1SQ66K74 1059 aaPredicted RBP15.38■□□□□ 0.05
HLA-DOB-209ENST00000488325 INTS5Q6P9B9 1019 aaKnown RBP15.38■□□□□ 0.05
HLA-DOB-209ENST00000488325 PAXIP1Q6ZW49 1069 aaPredicted RBP15.38■□□□□ 0.05
HLA-DOB-209ENST00000488325 CNTROBQ8N137 903 aa15.38■□□□□ 0.05
HLA-DOB-209ENST00000488325 GPR101Q96P66 508 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms