RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 IGF1RP08069 1367 aa9.4□□□□□ -0.9
VPS8-224ENST00000488255 HIRAP54198 1017 aaPredicted RBP9.4□□□□□ -0.9
VPS8-224ENST00000488255 ATXN7L1Q9ULK2 861 aaPredicted RBP9.4□□□□□ -0.9
VPS8-224ENST00000488255 FGFR3P22607 806 aa9.39□□□□□ -0.91
VPS8-224ENST00000488255 CTBSQ01459 385 aa9.39□□□□□ -0.91
VPS8-224ENST00000488255 SRSF11Q05519 484 aaKnown RBP9.39□□□□□ -0.91
VPS8-224ENST00000488255 FAM69CQ0P6D2 419 aa9.39□□□□□ -0.91
VPS8-224ENST00000488255 SWI5Q1ZZU3 235 aa9.39□□□□□ -0.91
VPS8-224ENST00000488255 C1orf53Q5VUE5 145 aa9.39□□□□□ -0.91
VPS8-224ENST00000488255 STAG2Q8N3U4 1231 aa9.39□□□□□ -0.91
VPS8-224ENST00000488255 ZNF280CQ8ND82 737 aa9.39□□□□□ -0.91
VPS8-224ENST00000488255 WHAMMQ8TF30 809 aa9.39□□□□□ -0.91
VPS8-224ENST00000488255 C7orf43Q8WVR3 580 aa9.39□□□□□ -0.91
VPS8-224ENST00000488255 MAPTP10636 758 aaKnown RBP9.38□□□□□ -0.91
VPS8-224ENST00000488255 BMP4P12644 408 aa9.38□□□□□ -0.91
VPS8-224ENST00000488255 CD33P20138 364 aa9.38□□□□□ -0.91
VPS8-224ENST00000488255 LORP23490 312 aaPredicted RBP9.38□□□□□ -0.91
VPS8-224ENST00000488255 POTEAQ6S8J7 498 aa9.38□□□□□ -0.91
VPS8-224ENST00000488255 MKNK1Q9BUB5 465 aa9.38□□□□□ -0.91
VPS8-224ENST00000488255 NSFL1CQ9UNZ2 370 aaKnown RBP9.38□□□□□ -0.91
VPS8-224ENST00000488255 FOXO3O43524 673 aa9.37□□□□□ -0.91
VPS8-224ENST00000488255 PPP1R15AO75807 674 aaPredicted RBP9.37□□□□□ -0.91
VPS8-224ENST00000488255 TNP2Q05952 138 aa9.37□□□□□ -0.91
VPS8-224ENST00000488255 FKBP5Q13451 457 aaPredicted RBP9.37□□□□□ -0.91
VPS8-224ENST00000488255 SVOPQ8N4V2 548 aa9.37□□□□□ -0.91
VPS8-224ENST00000488255 SUSD3Q96L08 255 aa9.37□□□□□ -0.91
VPS8-224ENST00000488255 CEP63Q96MT8 703 aa9.37□□□□□ -0.91
VPS8-224ENST00000488255 NDFIP2Q9NV92 336 aa9.37□□□□□ -0.91
VPS8-224ENST00000488255 CARNS1A5YM72 827 aa9.36□□□□□ -0.91
VPS8-224ENST00000488255 KLK14Q9P0G3 267 aa9.36□□□□□ -0.91
VPS8-224ENST00000488255 C2CD2LO14523 706 aa9.35□□□□□ -0.91
VPS8-224ENST00000488255 SLURP2P0DP57 97 aa9.35□□□□□ -0.91
VPS8-224ENST00000488255 OCLNQ16625 522 aa9.35□□□□□ -0.91
VPS8-224ENST00000488255 RTN1Q16799 776 aa9.35□□□□□ -0.91
VPS8-224ENST00000488255 LYPD4Q6UWN0 246 aa9.35□□□□□ -0.91
VPS8-224ENST00000488255 STRN4Q9NRL3 753 aa9.35□□□□□ -0.91
VPS8-224ENST00000488255 ANKIB1Q9P2G1 1089 aa9.35□□□□□ -0.91
VPS8-224ENST00000488255 HCN2Q9UL51 889 aa9.35□□□□□ -0.91
VPS8-224ENST00000488255 FAM157BP0CG42 384 aa9.34□□□□□ -0.91
VPS8-224ENST00000488255 DGKZQ13574 1117 aa9.34□□□□□ -0.91
VPS8-224ENST00000488255 ZNF385CQ66K41 422 aaPredicted RBP9.34□□□□□ -0.91
VPS8-224ENST00000488255 QTRT2Q9H974 415 aaKnown RBP9.34□□□□□ -0.91
VPS8-224ENST00000488255 SLAIN2Q9P270 581 aa9.34□□□□□ -0.91
VPS8-224ENST00000488255 GPC6Q9Y625 555 aaPredicted RBP9.34□□□□□ -0.91
VPS8-224ENST00000488255 ATP2B4P23634 1241 aa9.33□□□□□ -0.92
VPS8-224ENST00000488255 MAP2K3P46734 347 aa9.33□□□□□ -0.92
VPS8-224ENST00000488255 SFSWAPQ12872 951 aaKnown RBP9.33□□□□□ -0.92
VPS8-224ENST00000488255 NAA30Q147X3 362 aaPredicted RBP9.33□□□□□ -0.92
VPS8-224ENST00000488255 GRIN2CQ14957 1233 aa9.33□□□□□ -0.92
VPS8-224ENST00000488255 SAMD5Q5TGI4 173 aa9.33□□□□□ -0.92
VPS8-224ENST00000488255 CAPN12Q6ZSI9 719 aa9.33□□□□□ -0.92
VPS8-224ENST00000488255 CLP1Q92989 425 aaKnown RBP9.33□□□□□ -0.92
VPS8-224ENST00000488255 ACDQ96AP0 544 aa9.33□□□□□ -0.92
VPS8-224ENST00000488255 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.33□□□□□ -0.92
VPS8-224ENST00000488255 MARK1Q9P0L2 795 aa9.33□□□□□ -0.92
VPS8-224ENST00000488255 CXXC1Q9P0U4 656 aaPredicted RBP9.33□□□□□ -0.92
VPS8-224ENST00000488255 STK17AQ9UEE5 414 aa9.33□□□□□ -0.92
VPS8-224ENST00000488255 FAM181BA6NEQ2 426 aa9.32□□□□□ -0.92
VPS8-224ENST00000488255 CELA2BP08218 269 aaPredicted RBP9.32□□□□□ -0.92
VPS8-224ENST00000488255 MAP3K10Q02779 954 aa9.32□□□□□ -0.92
VPS8-224ENST00000488255 OXCT2Q9BYC2 517 aaPredicted RBP9.32□□□□□ -0.92
VPS8-224ENST00000488255 BRD7Q9NPI1 651 aa9.32□□□□□ -0.92
VPS8-224ENST00000488255 PRR12Q9ULL5 1215 aa9.32□□□□□ -0.92
VPS8-224ENST00000488255 EFSO43281 561 aa9.3□□□□□ -0.92
VPS8-224ENST00000488255 SCNN1AP37088 669 aa9.3□□□□□ -0.92
VPS8-224ENST00000488255 HIF1AQ16665 826 aa9.3□□□□□ -0.92
VPS8-224ENST00000488255 BTLAQ7Z6A9 289 aa9.3□□□□□ -0.92
VPS8-224ENST00000488255 SAP130Q9H0E3 1048 aa9.3□□□□□ -0.92
VPS8-224ENST00000488255 LRFN2Q9ULH4 789 aa9.3□□□□□ -0.92
VPS8-224ENST00000488255 BCS1LQ9Y276 419 aa9.3□□□□□ -0.92
VPS8-224ENST00000488255 TMEM88BA6NKF7 163 aa9.29□□□□□ -0.92
VPS8-224ENST00000488255 PCBP4P57723 403 aaKnown RBP9.29□□□□□ -0.92
VPS8-224ENST00000488255 TYRO3Q06418 890 aa9.29□□□□□ -0.92
VPS8-224ENST00000488255 COX20Q5RI15 118 aa9.29□□□□□ -0.92
VPS8-224ENST00000488255 NEURL1BA8MQ27 555 aa9.28□□□□□ -0.92
VPS8-224ENST00000488255 TGFBR3LH3BV60 316 aa9.28□□□□□ -0.92
VPS8-224ENST00000488255 BCRP11274 1271 aa9.28□□□□□ -0.92
VPS8-224ENST00000488255 C11orf91Q3C1V1 193 aa9.28□□□□□ -0.92
VPS8-224ENST00000488255 RAB44Q7Z6P3 723 aaPredicted RBP9.28□□□□□ -0.92
VPS8-224ENST00000488255 NEDD1Q8NHV4 660 aa9.28□□□□□ -0.92
VPS8-224ENST00000488255 GGA1Q9UJY5 639 aa9.28□□□□□ -0.92
VPS8-224ENST00000488255 DNMT3AQ9Y6K1 912 aaPredicted RBP9.28□□□□□ -0.92
VPS8-224ENST00000488255 C16orf46Q6P387 395 aa9.27□□□□□ -0.93
VPS8-224ENST00000488255 GALNT6Q8NCL4 622 aa9.27□□□□□ -0.93
VPS8-224ENST00000488255 IFT43Q96FT9 208 aa9.27□□□□□ -0.93
VPS8-224ENST00000488255 SLC30A3Q99726 388 aa9.27□□□□□ -0.93
VPS8-224ENST00000488255 SEPT3Q9UH03 358 aa9.27□□□□□ -0.93
VPS8-224ENST00000488255 KCNH4Q9UQ05 1017 aa9.27□□□□□ -0.93
VPS8-224ENST00000488255 IDH3AP50213 366 aa9.26□□□□□ -0.93
VPS8-224ENST00000488255 LAMC2Q13753 1193 aa9.26□□□□□ -0.93
VPS8-224ENST00000488255 FAM182BQ5T319 152 aa9.26□□□□□ -0.93
VPS8-224ENST00000488255 MYO19Q96H55 970 aa9.26□□□□□ -0.93
VPS8-224ENST00000488255 ADAMTS8Q9UP79 889 aa9.26□□□□□ -0.93
VPS8-224ENST00000488255 MICAL2O94851 1124 aa9.25□□□□□ -0.93
VPS8-224ENST00000488255 SPEM2Q0P670 501 aa9.25□□□□□ -0.93
VPS8-224ENST00000488255 C1orf229Q6ZS94 237 aaPredicted RBP9.25□□□□□ -0.93
VPS8-224ENST00000488255 GOLGA6L1Q8N7Z2 621 aa9.25□□□□□ -0.93
VPS8-224ENST00000488255 ENAMQ9NRM1 1142 aa9.25□□□□□ -0.93
VPS8-224ENST00000488255 GDF2Q9UK05 429 aaPredicted RBP9.25□□□□□ -0.93
VPS8-224ENST00000488255 USP20Q9Y2K6 914 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms