RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 LMO7Q8WWI1 1683 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 ERBB3P21860 1342 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 LETM1O95202 739 aaPredicted RBP3.18□□□□□ -1.9
C9orf72-205ENST00000488117 BAG4O95429 457 aaKnown RBP3.18□□□□□ -1.9
C9orf72-205ENST00000488117 HSP90B1P14625 803 aaKnown RBP3.18□□□□□ -1.9
C9orf72-205ENST00000488117 TSHZ3Q63HK5 1081 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 CWC27Q6UX04 472 aaKnown RBP3.18□□□□□ -1.9
C9orf72-205ENST00000488117 RBM42Q9BTD8 480 aaKnown RBP3.18□□□□□ -1.9
C9orf72-205ENST00000488117 BRPF3Q9ULD4 1205 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 KIF3AQ9Y496 699 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 KRT32Q14532 448 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 KLHL40Q2TBA0 621 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 ANKRD13DQ6ZTN6 518 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 XAGE3Q8WTP9 111 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 INTS4Q96HW7 963 aaKnown RBP3.18□□□□□ -1.9
C9orf72-205ENST00000488117 METTL22Q9BUU2 404 aaPredicted RBP3.18□□□□□ -1.9
C9orf72-205ENST00000488117 TEX13AQ9BXU3 409 aaPredicted RBP3.18□□□□□ -1.9
C9orf72-205ENST00000488117 SH2B1Q9NRF2 756 aaPredicted RBP3.18□□□□□ -1.9
C9orf72-205ENST00000488117 PDRG1Q9NUG6 133 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 ERBB4Q15303 1308 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 ABCC6O95255 1503 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 GOLGA6L4A6NEF3 574 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 KCNQ3O43525 872 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 PRPF40AO75400 957 aaKnown RBP3.18□□□□□ -1.9
C9orf72-205ENST00000488117 ANXA1P04083 346 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 NBPF7P0C2Y1 421 aaPredicted RBP3.18□□□□□ -1.9
C9orf72-205ENST00000488117 MSNP26038 577 aaKnown RBP3.18□□□□□ -1.9
C9orf72-205ENST00000488117 CCDC173Q0VFZ6 552 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 NFATC2IPQ8NCF5 419 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 ZCRB1Q8TBF4 217 aaKnown RBP3.18□□□□□ -1.9
C9orf72-205ENST00000488117 TMX3Q96JJ7 454 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 SIL1Q9H173 461 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 PHRF1Q9P1Y6 1649 aaKnown RBP3.17□□□□□ -1.9
C9orf72-205ENST00000488117 PTMAP06454 111 aaKnown RBP3.17□□□□□ -1.9
C9orf72-205ENST00000488117 FOXD4L5Q5VV16 416 aaPredicted RBP3.17□□□□□ -1.9
C9orf72-205ENST00000488117 FOXD4L4Q8WXT5 416 aaPredicted RBP3.17□□□□□ -1.9
C9orf72-205ENST00000488117 BICC1Q9H694 974 aaKnown RBP3.17□□□□□ -1.9
C9orf72-205ENST00000488117 LIMCH1Q9UPQ0 1083 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 ZNF330Q9Y3S2 320 aaPredicted RBP3.17□□□□□ -1.9
C9orf72-205ENST00000488117 LMTK3Q96Q04 1460 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 IL2RBP14784 551 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 CASTP20810 708 aaKnown RBP3.17□□□□□ -1.9
C9orf72-205ENST00000488117 PDCP20941 246 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 HSPA4P34932 840 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 NASPP49321 788 aaPredicted RBP3.17□□□□□ -1.9
C9orf72-205ENST00000488117 SLC39A6Q13433 755 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 MTX1Q13505 466 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 CHRNA2Q15822 529 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 CWF19L2Q2TBE0 894 aaKnown RBP3.17□□□□□ -1.9
C9orf72-205ENST00000488117 CAVIN1Q6NZI2 390 aaKnown RBP3.17□□□□□ -1.9
C9orf72-205ENST00000488117 COPS6Q7L5N1 327 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 PLBD2Q8NHP8 589 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 JAKMIP1Q96N16 626 aaKnown RBP3.17□□□□□ -1.9
C9orf72-205ENST00000488117 STRN4Q9NRL3 753 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 CWC25Q9NXE8 425 aaPredicted RBP3.17□□□□□ -1.9
C9orf72-205ENST00000488117 TMOD3Q9NYL9 352 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 HMG20BQ9P0W2 317 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 ADCY9O60503 1353 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 ERVV-2B6SEH9 535 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 SGSM2O43147 1006 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 SUCLG2Q96I99 432 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 DNAJC2Q99543 621 aaKnown RBP3.17□□□□□ -1.9
C9orf72-205ENST00000488117 KIF2CQ99661 725 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 MST1RQ04912 1400 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 MED1Q15648 1581 aaPredicted RBP3.17□□□□□ -1.9
C9orf72-205ENST00000488117 KDM3BQ7LBC6 1761 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 SPATA31A3Q5VYP0 1347 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 USP42Q9H9J4 1324 aaKnown RBP3.17□□□□□ -1.9
C9orf72-205ENST00000488117 A0A087WZG4 1122 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 NEURL1BA8MQ27 555 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 GCKRQ14397 625 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 CCDC158Q5M9N0 1113 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 PRPF40BQ6NWY9 871 aaKnown RBP3.17□□□□□ -1.9
C9orf72-205ENST00000488117 BLOC1S2Q6QNY1 142 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 DDX54Q8TDD1 881 aaKnown RBP3.17□□□□□ -1.9
C9orf72-205ENST00000488117 CNKSR2Q8WXI2 1034 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 NEUROD6Q96NK8 337 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 AKAP2Q9Y2D5 859 aa3.17□□□□□ -1.9
C9orf72-205ENST00000488117 PXDNQ92626 1479 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 A0A0G2JS52 829 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 STARD3NLO95772 234 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 HSP90AB3PQ58FF7 597 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 TTC39AQ5SRH9 613 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 VPS53Q5VIR6 699 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 CCDC8Q9H0W5 538 aaPredicted RBP3.16□□□□□ -1.9
C9orf72-205ENST00000488117 TSPY26PQ9H489 355 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 U3KPZ7 1027 aaPredicted RBP3.16□□□□□ -1.9
C9orf72-205ENST00000488117 H3BQV1 296 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 HMGB1P09429 215 aaKnown RBP3.16□□□□□ -1.9
C9orf72-205ENST00000488117 DDIT3P35638 169 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 CCDC57Q2TAC2 916 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 IFFO2Q5TF58 517 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 FAM184AQ8NB25 1140 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 CABLES1Q8TDN4 633 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 BOLA2Q9H3K6 86 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 NAP1L2Q9ULW6 460 aaPredicted RBP3.16□□□□□ -1.9
C9orf72-205ENST00000488117 PA2G4Q9UQ80 394 aaKnown RBP3.16□□□□□ -1.9
C9orf72-205ENST00000488117 CPDO75976 1380 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 MARF1Q9Y4F3 1742 aaKnown RBP3.16□□□□□ -1.9
C9orf72-205ENST00000488117 UTYO14607 1347 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms