RNA–Protein interactions for RNA: ENST00000487656.1

MACF1-221, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-221ENST00000487656 GPR153Q6NV75 609 aa7.67□□□□□ -1.18
MACF1-221ENST00000487656 ZNF454Q8N9F8 522 aa7.67□□□□□ -1.18
MACF1-221ENST00000487656 ZNF526Q8TF50 670 aaPredicted RBP7.67□□□□□ -1.18
MACF1-221ENST00000487656 KHSRPQ92945 711 aaKnown RBP eCLIP7.67□□□□□ -1.18
MACF1-221ENST00000487656 CARD14Q9BXL6 1004 aa7.67□□□□□ -1.18
MACF1-221ENST00000487656 IGSF1Q8N6C5 1336 aa7.67□□□□□ -1.18
MACF1-221ENST00000487656 PKD1L3Q7Z443 1732 aa7.66□□□□□ -1.18
MACF1-221ENST00000487656 IRF6O14896 467 aa7.66□□□□□ -1.18
MACF1-221ENST00000487656 HSP90AB1P08238 724 aaKnown RBP7.66□□□□□ -1.18
MACF1-221ENST00000487656 HSPA6P17066 643 aa7.66□□□□□ -1.18
MACF1-221ENST00000487656 FOSBP53539 338 aa7.66□□□□□ -1.18
MACF1-221ENST00000487656 TRAPPC3LQ5T215 181 aa7.66□□□□□ -1.18
MACF1-221ENST00000487656 NLGN1Q8N2Q7 840 aa7.66□□□□□ -1.18
MACF1-221ENST00000487656 LINC00116Q8NCU8 138 aa7.66□□□□□ -1.18
MACF1-221ENST00000487656 EYA1Q99502 592 aa7.66□□□□□ -1.18
MACF1-221ENST00000487656 ASAP1Q9ULH1 1129 aa7.66□□□□□ -1.18
MACF1-221ENST00000487656 RTCBQ9Y3I0 505 aaKnown RBP7.66□□□□□ -1.18
MACF1-221ENST00000487656 ERVV-2B6SEH9 535 aa7.65□□□□□ -1.18
MACF1-221ENST00000487656 PHKG2P15735 406 aa7.65□□□□□ -1.18
MACF1-221ENST00000487656 TGFB2P61812 414 aa7.65□□□□□ -1.18
MACF1-221ENST00000487656 GOLGB1Q14789 3259 aaKnown RBP7.65□□□□□ -1.18
MACF1-221ENST00000487656 SMIM5Q71RC9 77 aa7.65□□□□□ -1.18
MACF1-221ENST00000487656 ZDHHC16Q969W1 377 aa7.65□□□□□ -1.18
MACF1-221ENST00000487656 POLKQ9UBT6 870 aa7.65□□□□□ -1.18
MACF1-221ENST00000487656 WWC3Q9ULE0 1092 aa7.65□□□□□ -1.18
MACF1-221ENST00000487656 TIMELESSQ9UNS1 1208 aa7.65□□□□□ -1.18
MACF1-221ENST00000487656 TOGARAM1Q9Y4F4 1720 aa7.65□□□□□ -1.18
MACF1-221ENST00000487656 MMP10P09238 476 aa7.64□□□□□ -1.19
MACF1-221ENST00000487656 RFC4P35249 363 aa7.64□□□□□ -1.19
MACF1-221ENST00000487656 PDE4DQ08499 809 aa7.64□□□□□ -1.19
MACF1-221ENST00000487656 ITPK1Q13572 414 aa7.64□□□□□ -1.19
MACF1-221ENST00000487656 TSR1Q2NL82 804 aaKnown RBP7.64□□□□□ -1.19
MACF1-221ENST00000487656 PLEKHO1Q53GL0 409 aaPredicted RBP7.64□□□□□ -1.19
MACF1-221ENST00000487656 RC3H1Q5TC82 1133 aaKnown RBP7.64□□□□□ -1.19
MACF1-221ENST00000487656 AMIGO3Q86WK7 504 aa7.64□□□□□ -1.19
MACF1-221ENST00000487656 CCDC102AQ96A19 550 aa7.64□□□□□ -1.19
MACF1-221ENST00000487656 POLR3GLQ9BT43 218 aa7.64□□□□□ -1.19
MACF1-221ENST00000487656 CDHR5Q9HBB8 845 aa7.64□□□□□ -1.19
MACF1-221ENST00000487656 ATG3Q9NT62 314 aa7.64□□□□□ -1.19
MACF1-221ENST00000487656 CCDC87Q9NVE4 849 aa7.64□□□□□ -1.19
MACF1-221ENST00000487656 NCAPD2Q15021 1401 aa7.63□□□□□ -1.19
MACF1-221ENST00000487656 ADCY9O60503 1353 aa7.63□□□□□ -1.19
MACF1-221ENST00000487656 FECHP22830 423 aa7.63□□□□□ -1.19
MACF1-221ENST00000487656 TNNT2P45379 298 aaPredicted RBP7.63□□□□□ -1.19
MACF1-221ENST00000487656 CABP4P57796 275 aa7.63□□□□□ -1.19
MACF1-221ENST00000487656 EIF4A2Q14240 407 aaKnown RBP7.63□□□□□ -1.19
MACF1-221ENST00000487656 C6orf132Q5T0Z8 1188 aa7.63□□□□□ -1.19
MACF1-221ENST00000487656 ARHGAP27Q6ZUM4 889 aa7.63□□□□□ -1.19
MACF1-221ENST00000487656 DCAF5Q96JK2 942 aa7.63□□□□□ -1.19
MACF1-221ENST00000487656 NPDC1Q9NQX5 325 aaPredicted RBP7.63□□□□□ -1.19
MACF1-221ENST00000487656 BCS1LQ9Y276 419 aa7.63□□□□□ -1.19
MACF1-221ENST00000487656 PARP3Q9Y6F1 533 aa7.63□□□□□ -1.19
MACF1-221ENST00000487656 ANKRD26Q9UPS8 1709 aa7.63□□□□□ -1.19
MACF1-221ENST00000487656 PLEKHG2Q9H7P9 1386 aa7.62□□□□□ -1.19
MACF1-221ENST00000487656 KIF13BQ9NQT8 1826 aa7.62□□□□□ -1.19
MACF1-221ENST00000487656 N4BP2Q86UW6 1770 aaPredicted RBP7.62□□□□□ -1.19
MACF1-221ENST00000487656 A0A0G2JLW4 131 aa7.62□□□□□ -1.19
MACF1-221ENST00000487656 RPS6KA4O75676 772 aa7.62□□□□□ -1.19
MACF1-221ENST00000487656 TOMM70O94826 608 aa7.62□□□□□ -1.19
MACF1-221ENST00000487656 MTHFSP49914 203 aa7.62□□□□□ -1.19
MACF1-221ENST00000487656 APLP1P51693 650 aa7.62□□□□□ -1.19
MACF1-221ENST00000487656 TRIM26Q12899 539 aaPredicted RBP7.62□□□□□ -1.19
MACF1-221ENST00000487656 AMOTQ4VCS5 1084 aa7.62□□□□□ -1.19
MACF1-221ENST00000487656 LHX6Q9UPM6 363 aa7.62□□□□□ -1.19
MACF1-221ENST00000487656 ZNF831Q5JPB2 1677 aa7.61□□□□□ -1.19
MACF1-221ENST00000487656 C1orf141Q5JVX7 400 aa7.61□□□□□ -1.19
MACF1-221ENST00000487656 PPP4R3BQ5MIZ7 849 aa7.61□□□□□ -1.19
MACF1-221ENST00000487656 OTUD5Q96G74 571 aa7.61□□□□□ -1.19
MACF1-221ENST00000487656 CNTNAP4Q9C0A0 1308 aa7.6□□□□□ -1.19
MACF1-221ENST00000487656 GYS1P13807 737 aa7.6□□□□□ -1.19
MACF1-221ENST00000487656 HOXB1P14653 301 aaPredicted RBP7.6□□□□□ -1.19
MACF1-221ENST00000487656 DPEP1P16444 411 aa7.6□□□□□ -1.19
MACF1-221ENST00000487656 ZNF530Q6P9A1 599 aaPredicted RBP7.6□□□□□ -1.19
MACF1-221ENST00000487656 C16orf71Q8IYS4 520 aaPredicted RBP7.6□□□□□ -1.19
MACF1-221ENST00000487656 ADAM33Q9BZ11 813 aa7.6□□□□□ -1.19
MACF1-221ENST00000487656 KDM4CQ9H3R0 1056 aa7.6□□□□□ -1.19
MACF1-221ENST00000487656 PIM2Q9P1W9 311 aa7.6□□□□□ -1.19
MACF1-221ENST00000487656 DAXXQ9UER7 740 aaPredicted RBP7.6□□□□□ -1.19
MACF1-221ENST00000487656 CICQ96RK0 1608 aaPredicted RBP7.6□□□□□ -1.19
MACF1-221ENST00000487656 MYH14Q7Z406 1995 aaKnown RBP7.59□□□□□ -1.19
MACF1-221ENST00000487656 PTCD1O75127 700 aaKnown RBP7.59□□□□□ -1.19
MACF1-221ENST00000487656 DALRD3Q5D0E6 543 aaKnown RBP7.59□□□□□ -1.19
MACF1-221ENST00000487656 LHX8Q68G74 356 aa7.59□□□□□ -1.19
MACF1-221ENST00000487656 MORC1Q86VD1 984 aa7.59□□□□□ -1.19
MACF1-221ENST00000487656 NFATC2IPQ8NCF5 419 aa7.59□□□□□ -1.19
MACF1-221ENST00000487656 SLC4A9Q96Q91 983 aa7.59□□□□□ -1.19
MACF1-221ENST00000487656 PANK3Q9H999 370 aa7.59□□□□□ -1.19
MACF1-221ENST00000487656 PXDNLA1KZ92 1463 aa7.59□□□□□ -1.19
MACF1-221ENST00000487656 KDRP35968 1356 aa7.59□□□□□ -1.2
MACF1-221ENST00000487656 C4AP0C0L4 1744 aa7.58□□□□□ -1.2
MACF1-221ENST00000487656 COL5A3P25940 1745 aaPredicted RBP7.58□□□□□ -1.2
MACF1-221ENST00000487656 KDM2BQ8NHM5 1336 aa7.58□□□□□ -1.2
MACF1-221ENST00000487656 CEP350Q5VT06 3117 aa7.58□□□□□ -1.2
MACF1-221ENST00000487656 ARFGEF1Q9Y6D6 1849 aa7.58□□□□□ -1.2
MACF1-221ENST00000487656 ZPR1O75312 459 aa7.58□□□□□ -1.2
MACF1-221ENST00000487656 CRKLP46109 303 aaKnown RBP7.58□□□□□ -1.2
MACF1-221ENST00000487656 EIF4G2P78344 907 aaKnown RBP eCLIP7.58□□□□□ -1.2
MACF1-221ENST00000487656 GTF3C3Q9Y5Q9 886 aa7.58□□□□□ -1.2
MACF1-221ENST00000487656 BRCA1P38398 1863 aaKnown RBP7.58□□□□□ -1.2
MACF1-221ENST00000487656 CLSPNQ9HAW4 1339 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms