RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 ANKRD31Q8N7Z5 1873 aa16.16■□□□□ 0.18
VPS16-208ENST00000487461 GLTPD2A6NH11 291 aa16.16■□□□□ 0.18
VPS16-208ENST00000487461 HLFQ16534 295 aa16.16■□□□□ 0.18
VPS16-208ENST00000487461 STYK1Q6J9G0 422 aa16.16■□□□□ 0.18
VPS16-208ENST00000487461 NBPF5PQ86XG9 351 aaPredicted RBP16.16■□□□□ 0.18
VPS16-208ENST00000487461 DNAJC5GQ8N7S2 189 aa16.16■□□□□ 0.18
VPS16-208ENST00000487461 PNISRQ8TF01 805 aaKnown RBP16.16■□□□□ 0.18
VPS16-208ENST00000487461 CNKSR1Q969H4 720 aa16.16■□□□□ 0.18
VPS16-208ENST00000487461 ZNF652Q9Y2D9 606 aa16.16■□□□□ 0.18
VPS16-208ENST00000487461 EIF4A1P60842 406 aaKnown RBP16.15■□□□□ 0.18
VPS16-208ENST00000487461 FSTL1Q12841 308 aa16.15■□□□□ 0.18
VPS16-208ENST00000487461 MASTLQ96GX5 879 aa16.15■□□□□ 0.18
VPS16-208ENST00000487461 NIP7Q9Y221 180 aaKnown RBP eCLIP16.15■□□□□ 0.18
VPS16-208ENST00000487461 RGL2O15211 777 aa16.14■□□□□ 0.17
VPS16-208ENST00000487461 PRPF40BQ6NWY9 871 aaKnown RBP16.14■□□□□ 0.17
VPS16-208ENST00000487461 TPTE2Q6XPS3 522 aa16.14■□□□□ 0.17
VPS16-208ENST00000487461 NGEFQ8N5V2 710 aa16.14■□□□□ 0.17
VPS16-208ENST00000487461 PNNQ9H307 717 aaKnown RBP16.14■□□□□ 0.17
VPS16-208ENST00000487461 FAM177BA6PVY3 158 aa16.13■□□□□ 0.17
VPS16-208ENST00000487461 KLRG2A4D1S0 409 aaPredicted RBP16.12■□□□□ 0.17
VPS16-208ENST00000487461 POTECB2RU33 542 aa16.12■□□□□ 0.17
VPS16-208ENST00000487461 VEGFAP15692 232 aaPredicted RBP16.12■□□□□ 0.17
VPS16-208ENST00000487461 HTRA3P83110 453 aa16.12■□□□□ 0.17
VPS16-208ENST00000487461 RALBP1Q15311 655 aa16.12■□□□□ 0.17
VPS16-208ENST00000487461 ERFEQ4G0M1 354 aa16.12■□□□□ 0.17
VPS16-208ENST00000487461 C7orf43Q8WVR3 580 aa16.12■□□□□ 0.17
VPS16-208ENST00000487461 RRP7AQ9Y3A4 280 aaKnown RBP16.12■□□□□ 0.17
VPS16-208ENST00000487461 BCORQ6W2J9 1755 aa16.12■□□□□ 0.17
VPS16-208ENST00000487461 MAPK8IP3Q9UPT6 1336 aa16.12■□□□□ 0.17
VPS16-208ENST00000487461 COL11A2P13942 1736 aaPredicted RBP16.11■□□□□ 0.17
VPS16-208ENST00000487461 NPR1P16066 1061 aa16.11■□□□□ 0.17
VPS16-208ENST00000487461 TAOK3Q9H2K8 898 aa16.11■□□□□ 0.17
VPS16-208ENST00000487461 LTBP3Q9NS15 1303 aa16.11■□□□□ 0.17
VPS16-208ENST00000487461 SLX4Q8IY92 1834 aa16.1■□□□□ 0.17
VPS16-208ENST00000487461 ERVV-1B6SEH8 477 aa16.1■□□□□ 0.17
VPS16-208ENST00000487461 RIPK4P57078 832 aa16.1■□□□□ 0.17
VPS16-208ENST00000487461 DDX10Q13206 875 aaKnown RBP16.1■□□□□ 0.17
VPS16-208ENST00000487461 DPY19L2Q6NUT2 758 aa16.1■□□□□ 0.17
VPS16-208ENST00000487461 TTLL7Q6ZT98 887 aa16.1■□□□□ 0.17
VPS16-208ENST00000487461 SMC1BQ8NDV3 1235 aa16.1■□□□□ 0.17
VPS16-208ENST00000487461 CCDC88AQ3V6T2 1871 aa16.1■□□□□ 0.17
VPS16-208ENST00000487461 DLG5Q8TDM6 1919 aa16.09■□□□□ 0.17
VPS16-208ENST00000487461 MYL6BP14649 208 aa16.09■□□□□ 0.17
VPS16-208ENST00000487461 SOGA3Q5TF21 947 aa16.09■□□□□ 0.17
VPS16-208ENST00000487461 MAP3K15Q6ZN16 1313 aa16.08■□□□□ 0.16
VPS16-208ENST00000487461 FER1L6Q2WGJ9 1857 aa16.08■□□□□ 0.16
VPS16-208ENST00000487461 GTF2E1P29083 439 aaPredicted RBP16.07■□□□□ 0.16
VPS16-208ENST00000487461 TMPOP42166 694 aaKnown RBP16.07■□□□□ 0.16
VPS16-208ENST00000487461 OLFM4Q6UX06 510 aa16.07■□□□□ 0.16
VPS16-208ENST00000487461 NUTM1Q86Y26 1132 aa16.07■□□□□ 0.16
VPS16-208ENST00000487461 TSPYL4Q9UJ04 414 aa16.07■□□□□ 0.16
VPS16-208ENST00000487461 TNRC6CQ9HCJ0 1690 aaKnown RBP16.07■□□□□ 0.16
VPS16-208ENST00000487461 KDM3BQ7LBC6 1761 aa16.06■□□□□ 0.16
VPS16-208ENST00000487461 DDNO94850 711 aaPredicted RBP16.06■□□□□ 0.16
VPS16-208ENST00000487461 CCDC93Q567U6 631 aa16.06■□□□□ 0.16
VPS16-208ENST00000487461 KIF6Q6ZMV9 814 aa16.06■□□□□ 0.16
VPS16-208ENST00000487461 ZBTB3Q9H5J0 574 aa16.06■□□□□ 0.16
VPS16-208ENST00000487461 EIF2S2P20042 333 aaKnown RBP16.05■□□□□ 0.16
VPS16-208ENST00000487461 GPTP24298 496 aa16.05■□□□□ 0.16
VPS16-208ENST00000487461 ALDH1B1P30837 517 aa16.05■□□□□ 0.16
VPS16-208ENST00000487461 PDIA6Q15084 440 aa16.05■□□□□ 0.16
VPS16-208ENST00000487461 SUSD4Q5VX71 490 aa16.05■□□□□ 0.16
VPS16-208ENST00000487461 KLRG1Q96E93 195 aa16.05■□□□□ 0.16
VPS16-208ENST00000487461 NYXQ9GZU5 481 aa16.05■□□□□ 0.16
VPS16-208ENST00000487461 FKBP4Q02790 459 aaKnown RBP eCLIP16.04■□□□□ 0.16
VPS16-208ENST00000487461 CRY2Q49AN0 593 aa16.04■□□□□ 0.16
VPS16-208ENST00000487461 LRP10Q7Z4F1 713 aa16.04■□□□□ 0.16
VPS16-208ENST00000487461 ZNF34Q8IZ26 560 aa16.04■□□□□ 0.16
VPS16-208ENST00000487461 ZNF277Q9NRM2 450 aaPredicted RBP16.04■□□□□ 0.16
VPS16-208ENST00000487461 BABAM1Q9NWV8 329 aa16.04■□□□□ 0.16
VPS16-208ENST00000487461 ABCC12Q96J65 1359 aa16.03■□□□□ 0.16
VPS16-208ENST00000487461 TIAM2Q8IVF5 1701 aa16.03■□□□□ 0.16
VPS16-208ENST00000487461 ERBB4Q15303 1308 aa16.03■□□□□ 0.16
VPS16-208ENST00000487461 UBN2Q6ZU65 1347 aa16.03■□□□□ 0.16
VPS16-208ENST00000487461 MYBBP1AQ9BQG0 1328 aaKnown RBP16.03■□□□□ 0.16
VPS16-208ENST00000487461 GIGYF2Q6Y7W6 1299 aaKnown RBP16.03■□□□□ 0.16
VPS16-208ENST00000487461 CCDC146Q8IYE0 955 aa16.03■□□□□ 0.16
VPS16-208ENST00000487461 RTKN2Q8IZC4 609 aa16.03■□□□□ 0.16
VPS16-208ENST00000487461 LAMB4A4D0S4 1761 aa16.03■□□□□ 0.16
VPS16-208ENST00000487461 DICER1Q9UPY3 1922 aaKnown RBP16.02■□□□□ 0.16
VPS16-208ENST00000487461 ANXA1P04083 346 aa16.02■□□□□ 0.16
VPS16-208ENST00000487461 NEUROD2Q15784 382 aa16.02■□□□□ 0.16
VPS16-208ENST00000487461 PROSER3Q2NL68 480 aa16.02■□□□□ 0.16
VPS16-208ENST00000487461 SYNE4Q8N205 404 aa16.02■□□□□ 0.16
VPS16-208ENST00000487461 WDR90Q96KV7 1748 aa16.02■□□□□ 0.15
VPS16-208ENST00000487461 CACNA1SQ13698 1873 aa16.01■□□□□ 0.15
VPS16-208ENST00000487461 NTSR2O95665 410 aa16.01■□□□□ 0.15
VPS16-208ENST00000487461 LMOD3Q0VAK6 560 aa16.01■□□□□ 0.15
VPS16-208ENST00000487461 JMYQ8N9B5 988 aa16.01■□□□□ 0.15
VPS16-208ENST00000487461 ARFGEF2Q9Y6D5 1785 aa16■□□□□ 0.15
VPS16-208ENST00000487461 CHL1O00533 1208 aa16■□□□□ 0.15
VPS16-208ENST00000487461 POTEIP0CG38 1075 aa16■□□□□ 0.15
VPS16-208ENST00000487461 POTEJP0CG39 1038 aa16■□□□□ 0.15
VPS16-208ENST00000487461 HOXA10P31260 410 aaPredicted RBP16■□□□□ 0.15
VPS16-208ENST00000487461 NECTIN2Q92692 538 aa16■□□□□ 0.15
VPS16-208ENST00000487461 RUNDC1Q96C34 613 aa16■□□□□ 0.15
VPS16-208ENST00000487461 TRIM35Q9UPQ4 493 aa16■□□□□ 0.15
VPS16-208ENST00000487461 NUP98P52948 1817 aa16■□□□□ 0.15
VPS16-208ENST00000487461 KRT24Q2M2I5 525 aa15.99■□□□□ 0.15
VPS16-208ENST00000487461 C3orf67Q6ZVT6 689 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms