RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 PHAXQ9H814 394 aaKnown RBP16.35■□□□□ 0.21
PRDM2-208ENST00000487453 ATF5Q9Y2D1 282 aaPredicted RBP16.35■□□□□ 0.21
PRDM2-208ENST00000487453 COL24A1Q17RW2 1714 aa16.35■□□□□ 0.21
PRDM2-208ENST00000487453 NUP98P52948 1817 aa16.34■□□□□ 0.21
PRDM2-208ENST00000487453 CAMTA2O94983 1202 aa16.34■□□□□ 0.21
PRDM2-208ENST00000487453 ZNF428Q96B54 188 aa16.34■□□□□ 0.21
PRDM2-208ENST00000487453 SMC4Q9NTJ3 1288 aa16.34■□□□□ 0.21
PRDM2-208ENST00000487453 ZNF652Q9Y2D9 606 aa16.34■□□□□ 0.21
PRDM2-208ENST00000487453 CACNA1FO60840 1977 aa16.34■□□□□ 0.21
PRDM2-208ENST00000487453 MAP3K15Q6ZN16 1313 aa16.34■□□□□ 0.21
PRDM2-208ENST00000487453 FKBP8Q14318 412 aa16.33■□□□□ 0.2
PRDM2-208ENST00000487453 LRP5O75197 1615 aa16.32■□□□□ 0.2
PRDM2-208ENST00000487453 DDX58O95786 925 aaKnown RBP16.32■□□□□ 0.2
PRDM2-208ENST00000487453 ALDH1L2Q3SY69 923 aa16.32■□□□□ 0.2
PRDM2-208ENST00000487453 BICDL1Q6ZP65 573 aa16.32■□□□□ 0.2
PRDM2-208ENST00000487453 G2E3Q7L622 706 aa16.32■□□□□ 0.2
PRDM2-208ENST00000487453 NLGN1Q8N2Q7 840 aa16.32■□□□□ 0.2
PRDM2-208ENST00000487453 SSH1Q8WYL5 1049 aa16.32■□□□□ 0.2
PRDM2-208ENST00000487453 BCL2L12Q9HB09 334 aa16.32■□□□□ 0.2
PRDM2-208ENST00000487453 SPON1Q9HCB6 807 aa16.32■□□□□ 0.2
PRDM2-208ENST00000487453 POLD1P28340 1107 aa16.31■□□□□ 0.2
PRDM2-208ENST00000487453 FLIIQ13045 1269 aa16.31■□□□□ 0.2
PRDM2-208ENST00000487453 FKBP5Q13451 457 aaPredicted RBP16.31■□□□□ 0.2
PRDM2-208ENST00000487453 ERVV-1B6SEH8 477 aa16.3■□□□□ 0.2
PRDM2-208ENST00000487453 MMP10P09238 476 aa16.3■□□□□ 0.2
PRDM2-208ENST00000487453 HLFQ16534 295 aa16.3■□□□□ 0.2
PRDM2-208ENST00000487453 TBC1D9BQ66K14 1250 aa16.3■□□□□ 0.2
PRDM2-208ENST00000487453 ANKRD13DQ6ZTN6 518 aa16.3■□□□□ 0.2
PRDM2-208ENST00000487453 RIC3Q7Z5B4 369 aa16.3■□□□□ 0.2
PRDM2-208ENST00000487453 PLBD2Q8NHP8 589 aa16.3■□□□□ 0.2
PRDM2-208ENST00000487453 ATP10DQ9P241 1426 aa16.29■□□□□ 0.2
PRDM2-208ENST00000487453 AFDNP55196 1824 aaKnown RBP16.29■□□□□ 0.2
PRDM2-208ENST00000487453 RARSP54136 660 aaKnown RBP16.29■□□□□ 0.2
PRDM2-208ENST00000487453 MRPL50Q8N5N7 158 aaKnown RBP16.29■□□□□ 0.2
PRDM2-208ENST00000487453 CARMIL3Q8ND23 1372 aa16.28■□□□□ 0.2
PRDM2-208ENST00000487453 NFIXQ14938 502 aa16.28■□□□□ 0.2
PRDM2-208ENST00000487453 CLEC4GQ6UXB4 293 aa16.28■□□□□ 0.2
PRDM2-208ENST00000487453 GIGYF2Q6Y7W6 1299 aaKnown RBP16.28■□□□□ 0.2
PRDM2-208ENST00000487453 NIP7Q9Y221 180 aaKnown RBP eCLIP16.28■□□□□ 0.2
PRDM2-208ENST00000487453 PARP3Q9Y6F1 533 aa16.28■□□□□ 0.2
PRDM2-208ENST00000487453 ADCY9O60503 1353 aa16.27■□□□□ 0.2
PRDM2-208ENST00000487453 KIF16BQ96L93 1317 aa16.27■□□□□ 0.2
PRDM2-208ENST00000487453 PI4KAP2A4QPH2 592 aa16.27■□□□□ 0.2
PRDM2-208ENST00000487453 RGL2O15211 777 aa16.27■□□□□ 0.2
PRDM2-208ENST00000487453 GPTP24298 496 aa16.27■□□□□ 0.2
PRDM2-208ENST00000487453 HSP90AB3PQ58FF7 597 aa16.27■□□□□ 0.2
PRDM2-208ENST00000487453 PI4KAP1Q8N8J0 262 aa16.27■□□□□ 0.2
PRDM2-208ENST00000487453 SETDB2Q96T68 719 aa16.27■□□□□ 0.2
PRDM2-208ENST00000487453 MAP3K2Q9Y2U5 619 aa16.27■□□□□ 0.2
PRDM2-208ENST00000487453 NRXN2Q9P2S2 1712 aa16.26■□□□□ 0.19
PRDM2-208ENST00000487453 NPHP1O15259 732 aa16.26■□□□□ 0.19
PRDM2-208ENST00000487453 PTGER2P43116 358 aa16.26■□□□□ 0.19
PRDM2-208ENST00000487453 DDR1Q08345 913 aa16.26■□□□□ 0.19
PRDM2-208ENST00000487453 KSR2Q6VAB6 950 aa16.26■□□□□ 0.19
PRDM2-208ENST00000487453 MYD88Q99836 296 aa16.26■□□□□ 0.19
PRDM2-208ENST00000487453 PPP1R1BQ9UD71 204 aaPredicted RBP16.26■□□□□ 0.19
PRDM2-208ENST00000487453 PTPRCP08575 1304 aa16.25■□□□□ 0.19
PRDM2-208ENST00000487453 FAM177BA6PVY3 158 aa16.25■□□□□ 0.19
PRDM2-208ENST00000487453 POLRMTO00411 1230 aaKnown RBP16.25■□□□□ 0.19
PRDM2-208ENST00000487453 BCAR3O75815 825 aa16.25■□□□□ 0.19
PRDM2-208ENST00000487453 KLHL34Q8N239 644 aa16.25■□□□□ 0.19
PRDM2-208ENST00000487453 FRAT1Q92837 279 aaPredicted RBP16.25■□□□□ 0.19
PRDM2-208ENST00000487453 SGIP1Q9BQI5 828 aa16.25■□□□□ 0.19
PRDM2-208ENST00000487453 UBN2Q6ZU65 1347 aa16.24■□□□□ 0.19
PRDM2-208ENST00000487453 N4BP2Q86UW6 1770 aaPredicted RBP16.24■□□□□ 0.19
PRDM2-208ENST00000487453 TM4SF1P30408 202 aa16.24■□□□□ 0.19
PRDM2-208ENST00000487453 NEXNQ0ZGT2 675 aa16.24■□□□□ 0.19
PRDM2-208ENST00000487453 TCIRG1Q13488 830 aa16.24■□□□□ 0.19
PRDM2-208ENST00000487453 RCAN3Q9UKA8 241 aa16.24■□□□□ 0.19
PRDM2-208ENST00000487453 F6X3S4 739 aa16.23■□□□□ 0.19
PRDM2-208ENST00000487453 ATP5J2-PTCD1G3V325 749 aa16.23■□□□□ 0.19
PRDM2-208ENST00000487453 SERPINB2P05120 415 aa16.23■□□□□ 0.19
PRDM2-208ENST00000487453 SLC4A10Q6U841 1118 aa16.23■□□□□ 0.19
PRDM2-208ENST00000487453 NBPF5PQ86XG9 351 aaPredicted RBP16.23■□□□□ 0.19
PRDM2-208ENST00000487453 DNAAF4Q8WXU2 420 aa16.23■□□□□ 0.19
PRDM2-208ENST00000487453 METTL22Q9BUU2 404 aaPredicted RBP16.23■□□□□ 0.19
PRDM2-208ENST00000487453 NOB1Q9ULX3 412 aaKnown RBP16.23■□□□□ 0.19
PRDM2-208ENST00000487453 PXDNLA1KZ92 1463 aa16.22■□□□□ 0.19
PRDM2-208ENST00000487453 PARP10Q53GL7 1025 aa16.22■□□□□ 0.19
PRDM2-208ENST00000487453 ZNF34Q8IZ26 560 aa16.22■□□□□ 0.19
PRDM2-208ENST00000487453 CNBD1Q8NA66 436 aa16.22■□□□□ 0.19
PRDM2-208ENST00000487453 C10orf71Q711Q0 1435 aa16.21■□□□□ 0.19
PRDM2-208ENST00000487453 GTF2E1P29083 439 aaPredicted RBP16.21■□□□□ 0.19
PRDM2-208ENST00000487453 BRPF1P55201 1214 aaPredicted RBP16.21■□□□□ 0.19
PRDM2-208ENST00000487453 IBTKQ9P2D0 1353 aaPredicted RBP16.21■□□□□ 0.19
PRDM2-208ENST00000487453 KIF13BQ9NQT8 1826 aa16.21■□□□□ 0.19
PRDM2-208ENST00000487453 LAMB2P55268 1798 aa16.21■□□□□ 0.18
PRDM2-208ENST00000487453 ST5P78524 1137 aa16.2■□□□□ 0.18
PRDM2-208ENST00000487453 CWF19L2Q2TBE0 894 aaKnown RBP16.2■□□□□ 0.18
PRDM2-208ENST00000487453 SUSD4Q5VX71 490 aa16.2■□□□□ 0.18
PRDM2-208ENST00000487453 PPP1R42Q7Z4L9 355 aa16.2■□□□□ 0.18
PRDM2-208ENST00000487453 NLRP10Q86W26 655 aa16.2■□□□□ 0.18
PRDM2-208ENST00000487453 ISCA1Q9BUE6 129 aa16.2■□□□□ 0.18
PRDM2-208ENST00000487453 API5Q9BZZ5 524 aaKnown RBP16.2■□□□□ 0.18
PRDM2-208ENST00000487453 NYXQ9GZU5 481 aa16.2■□□□□ 0.18
PRDM2-208ENST00000487453 TNRC6CQ9HCJ0 1690 aaKnown RBP16.2■□□□□ 0.18
PRDM2-208ENST00000487453 ANKRD31Q8N7Z5 1873 aa16.19■□□□□ 0.18
PRDM2-208ENST00000487453 IPO8O15397 1037 aaKnown RBP16.19■□□□□ 0.18
PRDM2-208ENST00000487453 PRR5LQ6MZQ0 368 aa16.19■□□□□ 0.18
PRDM2-208ENST00000487453 TPTE2Q6XPS3 522 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms