RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 PROSER3Q2NL68 480 aa20.76■□□□□ 0.91
GABPA-203ENST00000487266 DALRD3Q5D0E6 543 aaKnown RBP20.76■□□□□ 0.91
GABPA-203ENST00000487266 TTLL7Q6ZT98 887 aa20.76■□□□□ 0.91
GABPA-203ENST00000487266 NECTIN2Q92692 538 aa20.76■□□□□ 0.91
GABPA-203ENST00000487266 CHL1O00533 1208 aa20.75■□□□□ 0.91
GABPA-203ENST00000487266 ANP32CO43423 234 aa20.75■□□□□ 0.91
GABPA-203ENST00000487266 C2CD5Q86YS7 1000 aa20.75■□□□□ 0.91
GABPA-203ENST00000487266 CNBD1Q8NA66 436 aa20.75■□□□□ 0.91
GABPA-203ENST00000487266 BABAM1Q9NWV8 329 aa20.75■□□□□ 0.91
GABPA-203ENST00000487266 ARHGAP27Q6ZUM4 889 aa20.74■□□□□ 0.91
GABPA-203ENST00000487266 MRS2Q9HD23 443 aa20.74■□□□□ 0.91
GABPA-203ENST00000487266 ZNF652Q9Y2D9 606 aa20.74■□□□□ 0.91
GABPA-203ENST00000487266 TNRC6CQ9HCJ0 1690 aaKnown RBP20.73■□□□□ 0.91
GABPA-203ENST00000487266 FAM177BA6PVY3 158 aa20.73■□□□□ 0.91
GABPA-203ENST00000487266 CLEC4GQ6UXB4 293 aa20.73■□□□□ 0.91
GABPA-203ENST00000487266 ZBTB3Q9H5J0 574 aa20.73■□□□□ 0.91
GABPA-203ENST00000487266 NIP7Q9Y221 180 aaKnown RBP eCLIP20.73■□□□□ 0.91
GABPA-203ENST00000487266 NPHP1O15259 732 aa20.72■□□□□ 0.91
GABPA-203ENST00000487266 PDIA6Q15084 440 aa20.72■□□□□ 0.91
GABPA-203ENST00000487266 LRP10Q7Z4F1 713 aa20.72■□□□□ 0.91
GABPA-203ENST00000487266 NBPF5PQ86XG9 351 aaPredicted RBP20.72■□□□□ 0.91
GABPA-203ENST00000487266 MAP3K15Q6ZN16 1313 aa20.72■□□□□ 0.91
GABPA-203ENST00000487266 KIF6Q6ZMV9 814 aa20.71■□□□□ 0.91
GABPA-203ENST00000487266 ZNF526Q8TF50 670 aaPredicted RBP20.71■□□□□ 0.91
GABPA-203ENST00000487266 MBIPQ9NS73 344 aa20.71■□□□□ 0.91
GABPA-203ENST00000487266 ERBB4Q15303 1308 aa20.71■□□□□ 0.91
GABPA-203ENST00000487266 H0YIN7 160 aa20.7■□□□□ 0.9
GABPA-203ENST00000487266 BRIP1Q9BX63 1249 aa20.7■□□□□ 0.9
GABPA-203ENST00000487266 SBF1O95248 1867 aa20.7■□□□□ 0.9
GABPA-203ENST00000487266 ST5P78524 1137 aa20.69■□□□□ 0.9
GABPA-203ENST00000487266 CFAP44Q96MT7 982 aa20.69■□□□□ 0.9
GABPA-203ENST00000487266 ANKRD36CQ5JPF3 1778 aa20.69■□□□□ 0.9
GABPA-203ENST00000487266 ARFGEF2Q9Y6D5 1785 aa20.69■□□□□ 0.9
GABPA-203ENST00000487266 SLX4Q8IY92 1834 aa20.69■□□□□ 0.9
GABPA-203ENST00000487266 GPTP24298 496 aa20.68■□□□□ 0.9
GABPA-203ENST00000487266 PDE6BP35913 854 aa20.68■□□□□ 0.9
GABPA-203ENST00000487266 RASSF7Q02833 373 aa20.68■□□□□ 0.9
GABPA-203ENST00000487266 ZNF622Q969S3 477 aaKnown RBP eCLIP20.68■□□□□ 0.9
GABPA-203ENST00000487266 UBN2Q6ZU65 1347 aa20.68■□□□□ 0.9
GABPA-203ENST00000487266 ABCC12Q96J65 1359 aa20.68■□□□□ 0.9
GABPA-203ENST00000487266 ERVV-1B6SEH8 477 aa20.67■□□□□ 0.9
GABPA-203ENST00000487266 RGL2O15211 777 aa20.67■□□□□ 0.9
GABPA-203ENST00000487266 ZNF853P0CG23 659 aa20.67■□□□□ 0.9
GABPA-203ENST00000487266 TTLL6Q8N841 843 aa20.67■□□□□ 0.9
GABPA-203ENST00000487266 CHPF2Q9P2E5 772 aa20.66■□□□□ 0.9
GABPA-203ENST00000487266 ZNF219Q9P2Y4 722 aaPredicted RBP20.66■□□□□ 0.9
GABPA-203ENST00000487266 CCDC88AQ3V6T2 1871 aa20.65■□□□□ 0.9
GABPA-203ENST00000487266 HDGFL1Q5TGJ6 251 aa20.65■□□□□ 0.9
GABPA-203ENST00000487266 NUTM1Q86Y26 1132 aa20.65■□□□□ 0.9
GABPA-203ENST00000487266 XAGE3Q8WTP9 111 aa20.65■□□□□ 0.9
GABPA-203ENST00000487266 IFT57Q9NWB7 429 aa20.65■□□□□ 0.9
GABPA-203ENST00000487266 AIMP1Q12904 312 aaKnown RBP20.64■□□□□ 0.89
GABPA-203ENST00000487266 C9orf131Q5VYM1 1079 aa20.64■□□□□ 0.89
GABPA-203ENST00000487266 DUSP27Q5VZP5 1158 aa20.64■□□□□ 0.89
GABPA-203ENST00000487266 FER1L6Q2WGJ9 1857 aa20.63■□□□□ 0.89
GABPA-203ENST00000487266 SRGNP10124 158 aa20.63■□□□□ 0.89
GABPA-203ENST00000487266 PRELPP51888 382 aa20.63■□□□□ 0.89
GABPA-203ENST00000487266 TPTE2Q6XPS3 522 aa20.63■□□□□ 0.89
GABPA-203ENST00000487266 COPS6Q7L5N1 327 aa20.63■□□□□ 0.89
GABPA-203ENST00000487266 TIAM2Q8IVF5 1701 aa20.63■□□□□ 0.89
GABPA-203ENST00000487266 ELL2O00472 640 aaPredicted RBP20.62■□□□□ 0.89
GABPA-203ENST00000487266 GNAI1P63096 354 aa20.62■□□□□ 0.89
GABPA-203ENST00000487266 ERFEQ4G0M1 354 aa20.62■□□□□ 0.89
GABPA-203ENST00000487266 SUSD4Q5VX71 490 aa20.62■□□□□ 0.89
GABPA-203ENST00000487266 GIGYF2Q6Y7W6 1299 aaKnown RBP20.62■□□□□ 0.89
GABPA-203ENST00000487266 ZNF34Q8IZ26 560 aa20.62■□□□□ 0.89
GABPA-203ENST00000487266 GPBP1L1Q9HC44 474 aaPredicted RBP20.62■□□□□ 0.89
GABPA-203ENST00000487266 DDX21Q9NR30 783 aaKnown RBP eCLIP20.62■□□□□ 0.89
GABPA-203ENST00000487266 C21orf2O43822 256 aa20.61■□□□□ 0.89
GABPA-203ENST00000487266 HOXB7P09629 217 aa20.61■□□□□ 0.89
GABPA-203ENST00000487266 TSR2Q969E8 191 aaKnown RBP20.61■□□□□ 0.89
GABPA-203ENST00000487266 ZNF428Q96B54 188 aa20.61■□□□□ 0.89
GABPA-203ENST00000487266 RNF181Q9P0P0 153 aa20.61■□□□□ 0.89
GABPA-203ENST00000487266 NFKBIEO00221 500 aa20.6■□□□□ 0.89
GABPA-203ENST00000487266 GTF2E1P29083 439 aaPredicted RBP20.6■□□□□ 0.89
GABPA-203ENST00000487266 CALD1Q05682 793 aaKnown RBP20.6■□□□□ 0.89
GABPA-203ENST00000487266 STYK1Q6J9G0 422 aa20.6■□□□□ 0.89
GABPA-203ENST00000487266 PRPF40BQ6NWY9 871 aaKnown RBP20.6■□□□□ 0.89
GABPA-203ENST00000487266 MASTLQ96GX5 879 aa20.6■□□□□ 0.89
GABPA-203ENST00000487266 PDZRN3Q9UPQ7 1066 aa20.6■□□□□ 0.89
GABPA-203ENST00000487266 SALL2Q9Y467 1007 aaPredicted RBP20.6■□□□□ 0.89
GABPA-203ENST00000487266 IBTKQ9P2D0 1353 aaPredicted RBP20.59■□□□□ 0.89
GABPA-203ENST00000487266 NTSR2O95665 410 aa20.59■□□□□ 0.89
GABPA-203ENST00000487266 WWC1Q8IX03 1113 aa20.59■□□□□ 0.89
GABPA-203ENST00000487266 C8orf58Q8NAV2 365 aa20.59■□□□□ 0.89
GABPA-203ENST00000487266 KLRG2A4D1S0 409 aaPredicted RBP20.58■□□□□ 0.89
GABPA-203ENST00000487266 C3orf67Q6ZVT6 689 aa20.58■□□□□ 0.89
GABPA-203ENST00000487266 FAM9BQ8IZU0 186 aa20.58■□□□□ 0.89
GABPA-203ENST00000487266 CNKSR1Q969H4 720 aa20.58■□□□□ 0.89
GABPA-203ENST00000487266 NYXQ9GZU5 481 aa20.58■□□□□ 0.89
GABPA-203ENST00000487266 LAMB2P55268 1798 aa20.58■□□□□ 0.89
GABPA-203ENST00000487266 OLFM4Q6UX06 510 aa20.57■□□□□ 0.88
GABPA-203ENST00000487266 TSPYL6Q8N831 410 aa20.57■□□□□ 0.88
GABPA-203ENST00000487266 NPR1P16066 1061 aa20.56■□□□□ 0.88
GABPA-203ENST00000487266 C1QTNF8P60827 252 aa20.56■□□□□ 0.88
GABPA-203ENST00000487266 CCDC27Q2M243 656 aa20.56■□□□□ 0.88
GABPA-203ENST00000487266 DBF4Q9UBU7 674 aaPredicted RBP20.56■□□□□ 0.88
GABPA-203ENST00000487266 RIC1Q4ADV7 1423 aa20.55■□□□□ 0.88
GABPA-203ENST00000487266 SLC51AQ86UW1 340 aa20.55■□□□□ 0.88
GABPA-203ENST00000487266 DICER1Q9UPY3 1922 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms