RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 DNAJC10Q8IXB1 793 aa16.39■□□□□ 0.21
TRIM56-204ENST00000487252 NFATC2IPQ8NCF5 419 aa16.39■□□□□ 0.21
TRIM56-204ENST00000487252 HABP4Q5JVS0 413 aaKnown RBP16.38■□□□□ 0.21
TRIM56-204ENST00000487252 PRR5LQ6MZQ0 368 aa16.38■□□□□ 0.21
TRIM56-204ENST00000487252 GPC2Q8N158 579 aa16.38■□□□□ 0.21
TRIM56-204ENST00000487252 SRGNP10124 158 aa16.37■□□□□ 0.21
TRIM56-204ENST00000487252 ZBTB1Q9Y2K1 713 aa16.36■□□□□ 0.21
TRIM56-204ENST00000487252 TRAF5O00463 557 aa16.35■□□□□ 0.21
TRIM56-204ENST00000487252 FKBP4Q02790 459 aaKnown RBP eCLIP16.35■□□□□ 0.21
TRIM56-204ENST00000487252 CIAPIN1Q6FI81 312 aa16.35■□□□□ 0.21
TRIM56-204ENST00000487252 BCORQ6W2J9 1755 aa16.34■□□□□ 0.21
TRIM56-204ENST00000487252 CCDC93Q567U6 631 aa16.34■□□□□ 0.21
TRIM56-204ENST00000487252 MASTLQ96GX5 879 aa16.34■□□□□ 0.21
TRIM56-204ENST00000487252 ZNF277Q9NRM2 450 aaPredicted RBP16.34■□□□□ 0.21
TRIM56-204ENST00000487252 SCN7AQ01118 1682 aa16.34■□□□□ 0.21
TRIM56-204ENST00000487252 SCN11AQ9UI33 1791 aa16.33■□□□□ 0.21
TRIM56-204ENST00000487252 ST20-MTHFSA0A0A6YYL1 179 aa16.33■□□□□ 0.2
TRIM56-204ENST00000487252 PPM1GO15355 546 aaPredicted RBP16.33■□□□□ 0.2
TRIM56-204ENST00000487252 MTHFSP49914 203 aa16.33■□□□□ 0.2
TRIM56-204ENST00000487252 PLEKHO1Q53GL0 409 aaPredicted RBP16.33■□□□□ 0.2
TRIM56-204ENST00000487252 TBC1D9BQ66K14 1250 aa16.33■□□□□ 0.2
TRIM56-204ENST00000487252 BICDL1Q6ZP65 573 aa16.33■□□□□ 0.2
TRIM56-204ENST00000487252 NBPF15Q8N660 670 aa16.33■□□□□ 0.2
TRIM56-204ENST00000487252 EIF4A2Q14240 407 aaKnown RBP16.32■□□□□ 0.2
TRIM56-204ENST00000487252 ZNF530Q6P9A1 599 aaPredicted RBP16.32■□□□□ 0.2
TRIM56-204ENST00000487252 CCDC24Q8N4L8 307 aa16.32■□□□□ 0.2
TRIM56-204ENST00000487252 SNED1Q8TER0 1413 aa16.31■□□□□ 0.2
TRIM56-204ENST00000487252 SCNN1DP51172 638 aa16.31■□□□□ 0.2
TRIM56-204ENST00000487252 EIF5P55010 431 aaKnown RBP16.31■□□□□ 0.2
TRIM56-204ENST00000487252 AMOTQ4VCS5 1084 aa16.31■□□□□ 0.2
TRIM56-204ENST00000487252 SIN3AQ96ST3 1273 aa16.31■□□□□ 0.2
TRIM56-204ENST00000487252 ZIC5Q96T25 663 aa16.31■□□□□ 0.2
TRIM56-204ENST00000487252 MKI67P46013 3256 aaKnown RBP16.31■□□□□ 0.2
TRIM56-204ENST00000487252 IARSP41252 1262 aaKnown RBP16.3■□□□□ 0.2
TRIM56-204ENST00000487252 USP50Q70EL3 339 aaPredicted RBP16.3■□□□□ 0.2
TRIM56-204ENST00000487252 SAGE1Q9NXZ1 904 aa16.3■□□□□ 0.2
TRIM56-204ENST00000487252 POLKQ9UBT6 870 aa16.3■□□□□ 0.2
TRIM56-204ENST00000487252 SLC24A1O60721 1099 aa16.29■□□□□ 0.2
TRIM56-204ENST00000487252 EPS15P42566 896 aa16.29■□□□□ 0.2
TRIM56-204ENST00000487252 FXR1P51114 621 aaKnown RBP eCLIP16.29■□□□□ 0.2
TRIM56-204ENST00000487252 NOGQ13253 232 aa16.29■□□□□ 0.2
TRIM56-204ENST00000487252 RTKN2Q8IZC4 609 aa16.29■□□□□ 0.2
TRIM56-204ENST00000487252 COL4A5P29400 1685 aa16.29■□□□□ 0.2
TRIM56-204ENST00000487252 CARD14Q9BXL6 1004 aa16.28■□□□□ 0.2
TRIM56-204ENST00000487252 KLRG2A4D1S0 409 aaPredicted RBP16.27■□□□□ 0.2
TRIM56-204ENST00000487252 CELF2O95319 508 aaKnown RBP16.27■□□□□ 0.2
TRIM56-204ENST00000487252 VSIG10Q8N0Z9 540 aa16.27■□□□□ 0.2
TRIM56-204ENST00000487252 CNBD1Q8NA66 436 aa16.27■□□□□ 0.2
TRIM56-204ENST00000487252 MRC1P22897 1456 aa16.27■□□□□ 0.19
TRIM56-204ENST00000487252 A0A087WZG4 1122 aa16.26■□□□□ 0.19
TRIM56-204ENST00000487252 LMOD1P29536 600 aaPredicted RBP16.26■□□□□ 0.19
TRIM56-204ENST00000487252 OLFM4Q6UX06 510 aa16.26■□□□□ 0.19
TRIM56-204ENST00000487252 UBR2Q8IWV8 1755 aa16.26■□□□□ 0.19
TRIM56-204ENST00000487252 C1orf141Q5JVX7 400 aa16.25■□□□□ 0.19
TRIM56-204ENST00000487252 CTU1Q7Z7A3 348 aaKnown RBP16.25■□□□□ 0.19
TRIM56-204ENST00000487252 SYNE4Q8N205 404 aa16.25■□□□□ 0.19
TRIM56-204ENST00000487252 PGAP2Q9UHJ9 254 aa16.25■□□□□ 0.19
TRIM56-204ENST00000487252 HPS5Q9UPZ3 1129 aa16.25■□□□□ 0.19
TRIM56-204ENST00000487252 SZT2Q5T011 3432 aa16.25■□□□□ 0.19
TRIM56-204ENST00000487252 NPR1P16066 1061 aa16.24■□□□□ 0.19
TRIM56-204ENST00000487252 CANXP27824 592 aaKnown RBP16.24■□□□□ 0.19
TRIM56-204ENST00000487252 ST5P78524 1137 aa16.24■□□□□ 0.19
TRIM56-204ENST00000487252 PSMD1Q99460 953 aa16.24■□□□□ 0.19
TRIM56-204ENST00000487252 SLC52A2Q9HAB3 445 aa16.24■□□□□ 0.19
TRIM56-204ENST00000487252 JDP2Q8WYK2 163 aa16.23■□□□□ 0.19
TRIM56-204ENST00000487252 FAM155AB1AL88 458 aaPredicted RBP16.22■□□□□ 0.19
TRIM56-204ENST00000487252 EIF6P56537 245 aaKnown RBP16.22■□□□□ 0.19
TRIM56-204ENST00000487252 SLC39A6Q13433 755 aa16.22■□□□□ 0.19
TRIM56-204ENST00000487252 AKAP4Q5JQC9 854 aa16.22■□□□□ 0.19
TRIM56-204ENST00000487252 SETDB2Q96T68 719 aa16.22■□□□□ 0.19
TRIM56-204ENST00000487252 GJA3Q9Y6H8 435 aa16.22■□□□□ 0.19
TRIM56-204ENST00000487252 PCGF6Q9BYE7 350 aa16.21■□□□□ 0.19
TRIM56-204ENST00000487252 RNF186Q9NXI6 227 aa16.21■□□□□ 0.19
TRIM56-204ENST00000487252 AKAP11Q9UKA4 1901 aa16.21■□□□□ 0.19
TRIM56-204ENST00000487252 A0A0C4DFX4 3053 aa16.2■□□□□ 0.18
TRIM56-204ENST00000487252 DLL1O00548 723 aa16.2■□□□□ 0.18
TRIM56-204ENST00000487252 TRIM26Q12899 539 aaPredicted RBP16.2■□□□□ 0.18
TRIM56-204ENST00000487252 GLIS2Q9BZE0 524 aaPredicted RBP16.2■□□□□ 0.18
TRIM56-204ENST00000487252 ADARB2Q9NS39 739 aaKnown RBP16.2■□□□□ 0.18
TRIM56-204ENST00000487252 TBC1D2BQ9UPU7 963 aa16.2■□□□□ 0.18
TRIM56-204ENST00000487252 CAMTA2O94983 1202 aa16.19■□□□□ 0.18
TRIM56-204ENST00000487252 NEUROD1Q13562 356 aa16.19■□□□□ 0.18
TRIM56-204ENST00000487252 PKN2Q16513 984 aaKnown RBP16.19■□□□□ 0.18
TRIM56-204ENST00000487252 GPRC5DQ9NZD1 345 aa16.19■□□□□ 0.18
TRIM56-204ENST00000487252 TRPA1O75762 1119 aa16.18■□□□□ 0.18
TRIM56-204ENST00000487252 STARD3NLO95772 234 aa16.18■□□□□ 0.18
TRIM56-204ENST00000487252 AEBP1Q8IUX7 1158 aa16.18■□□□□ 0.18
TRIM56-204ENST00000487252 LGR6Q9HBX8 967 aa16.18■□□□□ 0.18
TRIM56-204ENST00000487252 CUL9Q8IWT3 2517 aa16.17■□□□□ 0.18
TRIM56-204ENST00000487252 IL6STP40189 918 aaPredicted RBP16.17■□□□□ 0.18
TRIM56-204ENST00000487252 ZC3H15Q8WU90 426 aaKnown RBP16.17■□□□□ 0.18
TRIM56-204ENST00000487252 HUNKP57058 714 aa16.16■□□□□ 0.18
TRIM56-204ENST00000487252 KIF23Q02241 960 aaPredicted RBP16.16■□□□□ 0.18
TRIM56-204ENST00000487252 NPHP1O15259 732 aa16.15■□□□□ 0.18
TRIM56-204ENST00000487252 ALDH1B1P30837 517 aa16.15■□□□□ 0.18
TRIM56-204ENST00000487252 RGMBQ6NW40 437 aa16.15■□□□□ 0.18
TRIM56-204ENST00000487252 HTTP42858 3142 aa16.14■□□□□ 0.17
TRIM56-204ENST00000487252 CC2D2BQ6DHV5 1058 aa16.14■□□□□ 0.17
TRIM56-204ENST00000487252 CDC37L1Q7L3B6 337 aa16.14■□□□□ 0.17
TRIM56-204ENST00000487252 CCDC102AQ96A19 550 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms