RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 TRIM67Q6ZTA4 783 aa9.45□□□□□ -0.9
RTFDC1-209ENST00000487211 TNS4Q8IZW8 715 aa9.45□□□□□ -0.9
RTFDC1-209ENST00000487211 KLF16Q9BXK1 252 aaPredicted RBP9.45□□□□□ -0.9
RTFDC1-209ENST00000487211 ZFAND3Q9H8U3 227 aa9.45□□□□□ -0.9
RTFDC1-209ENST00000487211 ARHGAP5Q13017 1502 aa9.45□□□□□ -0.9
RTFDC1-209ENST00000487211 PREX1Q8TCU6 1659 aa9.45□□□□□ -0.9
RTFDC1-209ENST00000487211 SCNN1AP37088 669 aa9.44□□□□□ -0.9
RTFDC1-209ENST00000487211 PRR20EP86478 221 aa9.44□□□□□ -0.9
RTFDC1-209ENST00000487211 PRR20CP86479 221 aa9.44□□□□□ -0.9
RTFDC1-209ENST00000487211 PRR20DP86480 221 aa9.44□□□□□ -0.9
RTFDC1-209ENST00000487211 PRR20BP86481 221 aa9.44□□□□□ -0.9
RTFDC1-209ENST00000487211 PRR20AP86496 221 aa9.44□□□□□ -0.9
RTFDC1-209ENST00000487211 TXNDC2Q86VQ3 553 aa9.44□□□□□ -0.9
RTFDC1-209ENST00000487211 GNEQ9Y223 722 aaKnown RBP9.44□□□□□ -0.9
RTFDC1-209ENST00000487211 CCDC9Q9Y3X0 531 aaKnown RBP9.44□□□□□ -0.9
RTFDC1-209ENST00000487211 DENND4BO75064 1496 aaPredicted RBP9.44□□□□□ -0.9
RTFDC1-209ENST00000487211 ARHGEF12Q9NZN5 1544 aa9.44□□□□□ -0.9
RTFDC1-209ENST00000487211 CDC42BPBQ9Y5S2 1711 aa9.44□□□□□ -0.9
RTFDC1-209ENST00000487211 TRAPPC8Q9Y2L5 1435 aa9.43□□□□□ -0.9
RTFDC1-209ENST00000487211 TIMP2P16035 220 aa9.43□□□□□ -0.9
RTFDC1-209ENST00000487211 WEE1P30291 646 aa9.43□□□□□ -0.9
RTFDC1-209ENST00000487211 TMCO4Q5TGY1 634 aa9.43□□□□□ -0.9
RTFDC1-209ENST00000487211 Q6ZVU0 165 aa9.43□□□□□ -0.9
RTFDC1-209ENST00000487211 C1orf216Q8TAB5 229 aa9.43□□□□□ -0.9
RTFDC1-209ENST00000487211 AGBL1Q96MI9 1066 aa9.43□□□□□ -0.9
RTFDC1-209ENST00000487211 IL2RAP01589 272 aa9.42□□□□□ -0.9
RTFDC1-209ENST00000487211 KDF1Q8NAX2 398 aaPredicted RBP9.42□□□□□ -0.9
RTFDC1-209ENST00000487211 GAS2L2Q8NHY3 880 aa9.42□□□□□ -0.9
RTFDC1-209ENST00000487211 HPS1Q92902 700 aa9.42□□□□□ -0.9
RTFDC1-209ENST00000487211 CNKSR1Q969H4 720 aa9.42□□□□□ -0.9
RTFDC1-209ENST00000487211 XAGE2Q96GT9 111 aa9.42□□□□□ -0.9
RTFDC1-209ENST00000487211 SLC4A9Q96Q91 983 aa9.42□□□□□ -0.9
RTFDC1-209ENST00000487211 CDC42BPAQ5VT25 1732 aa9.42□□□□□ -0.9
RTFDC1-209ENST00000487211 MYO5CQ9NQX4 1742 aa9.42□□□□□ -0.9
RTFDC1-209ENST00000487211 ALKQ9UM73 1620 aa9.42□□□□□ -0.9
RTFDC1-209ENST00000487211 A0A1W2PRU2 124 aa9.41□□□□□ -0.9
RTFDC1-209ENST00000487211 PTGIRP43119 386 aa9.41□□□□□ -0.9
RTFDC1-209ENST00000487211 SMTNP53814 917 aa9.41□□□□□ -0.9
RTFDC1-209ENST00000487211 RELBQ01201 579 aa9.41□□□□□ -0.9
RTFDC1-209ENST00000487211 TAS1R3Q7RTX0 852 aa9.41□□□□□ -0.9
RTFDC1-209ENST00000487211 SCG3Q8WXD2 468 aaKnown RBP9.41□□□□□ -0.9
RTFDC1-209ENST00000487211 TSPAN10Q9H1Z9 355 aaPredicted RBP9.41□□□□□ -0.9
RTFDC1-209ENST00000487211 MTMR7Q9Y216 660 aa9.41□□□□□ -0.9
RTFDC1-209ENST00000487211 SUPT6HQ7KZ85 1726 aaKnown RBP9.41□□□□□ -0.9
RTFDC1-209ENST00000487211 SIGLEC1Q9BZZ2 1709 aa9.41□□□□□ -0.9
RTFDC1-209ENST00000487211 PREX2Q70Z35 1606 aa9.41□□□□□ -0.9
RTFDC1-209ENST00000487211 MYOM3Q5VTT5 1437 aa9.4□□□□□ -0.9
RTFDC1-209ENST00000487211 KIAA1107Q9UPP5 1409 aa9.4□□□□□ -0.9
RTFDC1-209ENST00000487211 A6NJY4 79 aa9.4□□□□□ -0.9
RTFDC1-209ENST00000487211 MEN1O00255 615 aa9.4□□□□□ -0.9
RTFDC1-209ENST00000487211 IGFBP4P22692 258 aa9.4□□□□□ -0.9
RTFDC1-209ENST00000487211 EPHA4P54764 986 aa9.4□□□□□ -0.9
RTFDC1-209ENST00000487211 FKBP5Q13451 457 aaPredicted RBP9.4□□□□□ -0.9
RTFDC1-209ENST00000487211 TLR1Q15399 786 aa9.4□□□□□ -0.9
RTFDC1-209ENST00000487211 ESYT1Q9BSJ8 1104 aa9.4□□□□□ -0.9
RTFDC1-209ENST00000487211 MKNK1Q9BUB5 465 aa9.4□□□□□ -0.9
RTFDC1-209ENST00000487211 MBD5Q9P267 1494 aa9.4□□□□□ -0.91
RTFDC1-209ENST00000487211 POGZQ7Z3K3 1410 aa9.39□□□□□ -0.91
RTFDC1-209ENST00000487211 ATAD2Q6PL18 1390 aa9.39□□□□□ -0.91
RTFDC1-209ENST00000487211 SAMD9LQ8IVG5 1584 aa9.39□□□□□ -0.91
RTFDC1-209ENST00000487211 SERPINB4P48594 390 aa9.39□□□□□ -0.91
RTFDC1-209ENST00000487211 CLN3Q13286 438 aa9.39□□□□□ -0.91
RTFDC1-209ENST00000487211 TBCELQ5QJ74 424 aa9.39□□□□□ -0.91
RTFDC1-209ENST00000487211 NLRP3Q96P20 1036 aa9.39□□□□□ -0.91
RTFDC1-209ENST00000487211 PURBQ96QR8 312 aaKnown RBP9.39□□□□□ -0.91
RTFDC1-209ENST00000487211 ZNF395Q9H8N7 513 aaPredicted RBP9.39□□□□□ -0.91
RTFDC1-209ENST00000487211 MIA2Q96PC5 1412 aa9.39□□□□□ -0.91
RTFDC1-209ENST00000487211 FRMPD1Q5SYB0 1578 aa9.38□□□□□ -0.91
RTFDC1-209ENST00000487211 SLC9A9Q8IVB4 645 aa9.38□□□□□ -0.91
RTFDC1-209ENST00000487211 SCHIP1Q9P0W5 487 aaPredicted RBP9.38□□□□□ -0.91
RTFDC1-209ENST00000487211 PDZRN3Q9UPQ7 1066 aa9.38□□□□□ -0.91
RTFDC1-209ENST00000487211 CFAP74Q9C0B2 1584 aa9.37□□□□□ -0.91
RTFDC1-209ENST00000487211 SPAG9O60271 1321 aaKnown RBP9.37□□□□□ -0.91
RTFDC1-209ENST00000487211 ABCC1P33527 1531 aa9.37□□□□□ -0.91
RTFDC1-209ENST00000487211 FOXO3O43524 673 aa9.37□□□□□ -0.91
RTFDC1-209ENST00000487211 PPP1R12BO60237 982 aaPredicted RBP9.37□□□□□ -0.91
RTFDC1-209ENST00000487211 RGS20O76081 388 aa9.37□□□□□ -0.91
RTFDC1-209ENST00000487211 FOXK2Q01167 660 aa9.37□□□□□ -0.91
RTFDC1-209ENST00000487211 MTFR1Q15390 333 aa9.37□□□□□ -0.91
RTFDC1-209ENST00000487211 SND1Q7KZF4 910 aaKnown RBP eCLIP9.37□□□□□ -0.91
RTFDC1-209ENST00000487211 MEIOBQ8N635 442 aa9.37□□□□□ -0.91
RTFDC1-209ENST00000487211 VTI1AQ96AJ9 217 aa9.37□□□□□ -0.91
RTFDC1-209ENST00000487211 HRH3Q9Y5N1 445 aa9.37□□□□□ -0.91
RTFDC1-209ENST00000487211 RICTORQ6R327 1708 aa9.36□□□□□ -0.91
RTFDC1-209ENST00000487211 SYCP2Q9BX26 1530 aa9.36□□□□□ -0.91
RTFDC1-209ENST00000487211 CAMSAP2Q08AD1 1489 aa9.36□□□□□ -0.91
RTFDC1-209ENST00000487211 ZNF518AQ6AHZ1 1483 aa9.36□□□□□ -0.91
RTFDC1-209ENST00000487211 PLEKHH2Q8IVE3 1493 aa9.36□□□□□ -0.91
RTFDC1-209ENST00000487211 CAPN5O15484 640 aaPredicted RBP9.36□□□□□ -0.91
RTFDC1-209ENST00000487211 C21orf2O43822 256 aa9.36□□□□□ -0.91
RTFDC1-209ENST00000487211 ABL1P00519 1130 aa9.36□□□□□ -0.91
RTFDC1-209ENST00000487211 CENPCQ03188 943 aa9.36□□□□□ -0.91
RTFDC1-209ENST00000487211 CAPN12Q6ZSI9 719 aa9.36□□□□□ -0.91
RTFDC1-209ENST00000487211 SEPT3Q9UH03 358 aa9.36□□□□□ -0.91
RTFDC1-209ENST00000487211 FGD6Q6ZV73 1430 aa9.36□□□□□ -0.91
RTFDC1-209ENST00000487211 CDK2AP1O14519 115 aa9.35□□□□□ -0.91
RTFDC1-209ENST00000487211 PTCD1O75127 700 aaKnown RBP9.35□□□□□ -0.91
RTFDC1-209ENST00000487211 TSPY4P0CV99 314 aa9.35□□□□□ -0.91
RTFDC1-209ENST00000487211 TSPY10P0CW01 314 aa9.35□□□□□ -0.91
RTFDC1-209ENST00000487211 MFAP1P55081 439 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms