RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 TBC1D9BQ66K14 1250 aa10.43□□□□□ -0.74
PDPN-205ENST00000487038 PRPF40BQ6NWY9 871 aaKnown RBP10.43□□□□□ -0.74
PDPN-205ENST00000487038 MASTLQ96GX5 879 aa10.43□□□□□ -0.74
PDPN-205ENST00000487038 HACL1Q9UJ83 578 aa10.43□□□□□ -0.74
PDPN-205ENST00000487038 TNRC18O15417 2968 aaPredicted RBP10.42□□□□□ -0.74
PDPN-205ENST00000487038 WDR33Q9C0J8 1336 aaKnown RBP10.42□□□□□ -0.74
PDPN-205ENST00000487038 RNMTO43148 476 aaKnown RBP10.42□□□□□ -0.74
PDPN-205ENST00000487038 EIF5P55010 431 aaKnown RBP10.42□□□□□ -0.74
PDPN-205ENST00000487038 MORC1Q86VD1 984 aa10.42□□□□□ -0.74
PDPN-205ENST00000487038 SETDB2Q96T68 719 aa10.42□□□□□ -0.74
PDPN-205ENST00000487038 ABT1Q9ULW3 272 aaKnown RBP10.42□□□□□ -0.74
PDPN-205ENST00000487038 ZNF330Q9Y3S2 320 aaPredicted RBP10.42□□□□□ -0.74
PDPN-205ENST00000487038 LTBP1Q14766 1721 aa10.41□□□□□ -0.74
PDPN-205ENST00000487038 CCDC85CA6NKD9 419 aa10.41□□□□□ -0.74
PDPN-205ENST00000487038 ITGBL1O95965 494 aaPredicted RBP10.41□□□□□ -0.74
PDPN-205ENST00000487038 SRGNP10124 158 aa10.41□□□□□ -0.74
PDPN-205ENST00000487038 EPHX2P34913 555 aa10.41□□□□□ -0.74
PDPN-205ENST00000487038 ECE1P42892 770 aa10.41□□□□□ -0.74
PDPN-205ENST00000487038 TEX13AQ9BXU3 409 aaPredicted RBP10.41□□□□□ -0.74
PDPN-205ENST00000487038 LGR6Q9HBX8 967 aa10.41□□□□□ -0.74
PDPN-205ENST00000487038 HEG1Q9ULI3 1381 aa10.4□□□□□ -0.74
PDPN-205ENST00000487038 IL6STP40189 918 aaPredicted RBP10.4□□□□□ -0.74
PDPN-205ENST00000487038 FKBP4Q02790 459 aaKnown RBP eCLIP10.4□□□□□ -0.74
PDPN-205ENST00000487038 LAMB4A4D0S4 1761 aa10.39□□□□□ -0.75
PDPN-205ENST00000487038 RNF123Q5XPI4 1314 aa10.39□□□□□ -0.75
PDPN-205ENST00000487038 ZNF541Q9H0D2 1346 aa10.39□□□□□ -0.75
PDPN-205ENST00000487038 IL13P35225 146 aa10.39□□□□□ -0.75
PDPN-205ENST00000487038 PAXIP1Q6ZW49 1069 aaPredicted RBP10.39□□□□□ -0.75
PDPN-205ENST00000487038 CNTROBQ8N137 903 aa10.39□□□□□ -0.75
PDPN-205ENST00000487038 CCDC24Q8N4L8 307 aa10.39□□□□□ -0.75
PDPN-205ENST00000487038 TBC1D2BQ9UPU7 963 aa10.39□□□□□ -0.75
PDPN-205ENST00000487038 NPR1P16066 1061 aa10.38□□□□□ -0.75
PDPN-205ENST00000487038 LMOD1P29536 600 aaPredicted RBP10.38□□□□□ -0.75
PDPN-205ENST00000487038 RGS19P49795 217 aa10.38□□□□□ -0.75
PDPN-205ENST00000487038 TEFQ10587 303 aa10.38□□□□□ -0.75
PDPN-205ENST00000487038 RTKN2Q8IZC4 609 aa10.38□□□□□ -0.75
PDPN-205ENST00000487038 GPC2Q8N158 579 aa10.38□□□□□ -0.75
PDPN-205ENST00000487038 CFAP44Q96MT7 982 aa10.38□□□□□ -0.75
PDPN-205ENST00000487038 ZNF652Q9Y2D9 606 aa10.38□□□□□ -0.75
PDPN-205ENST00000487038 IARSP41252 1262 aaKnown RBP10.37□□□□□ -0.75
PDPN-205ENST00000487038 MAP1SQ66K74 1059 aaPredicted RBP10.37□□□□□ -0.75
PDPN-205ENST00000487038 NBPF5PQ86XG9 351 aaPredicted RBP10.37□□□□□ -0.75
PDPN-205ENST00000487038 JDP2Q8WYK2 163 aa10.37□□□□□ -0.75
PDPN-205ENST00000487038 PANK3Q9H999 370 aa10.37□□□□□ -0.75
PDPN-205ENST00000487038 DDX21Q9NR30 783 aaKnown RBP eCLIP10.37□□□□□ -0.75
PDPN-205ENST00000487038 CA12O43570 354 aa10.36□□□□□ -0.75
PDPN-205ENST00000487038 CAMTA2O94983 1202 aa10.36□□□□□ -0.75
PDPN-205ENST00000487038 HMOX1P09601 288 aa10.36□□□□□ -0.75
PDPN-205ENST00000487038 MTHFSDQ2M296 383 aaKnown RBP10.36□□□□□ -0.75
PDPN-205ENST00000487038 ZNF790Q6PG37 636 aa10.36□□□□□ -0.75
PDPN-205ENST00000487038 DZIP3Q86Y13 1208 aaKnown RBP10.36□□□□□ -0.75
PDPN-205ENST00000487038 CAPNS2Q96L46 248 aa10.36□□□□□ -0.75
PDPN-205ENST00000487038 FMNL2Q96PY5 1086 aa10.36□□□□□ -0.75
PDPN-205ENST00000487038 ZNF277Q9NRM2 450 aaPredicted RBP10.36□□□□□ -0.75
PDPN-205ENST00000487038 CASP8AP2Q9UKL3 1982 aa10.35□□□□□ -0.75
PDPN-205ENST00000487038 NUP98P52948 1817 aa10.35□□□□□ -0.75
PDPN-205ENST00000487038 FZD9O00144 591 aa10.35□□□□□ -0.75
PDPN-205ENST00000487038 ALDH1B1P30837 517 aa10.35□□□□□ -0.75
PDPN-205ENST00000487038 EIF6P56537 245 aaKnown RBP10.35□□□□□ -0.75
PDPN-205ENST00000487038 GRM1Q13255 1194 aa10.35□□□□□ -0.75
PDPN-205ENST00000487038 CLEC4GQ6UXB4 293 aa10.35□□□□□ -0.75
PDPN-205ENST00000487038 ZNF496Q96IT1 587 aaPredicted RBP10.35□□□□□ -0.75
PDPN-205ENST00000487038 GPR101Q96P66 508 aaPredicted RBP10.35□□□□□ -0.75
PDPN-205ENST00000487038 KNSTRNQ9Y448 316 aa10.35□□□□□ -0.75
PDPN-205ENST00000487038 TPTE2Q6XPS3 522 aa10.34□□□□□ -0.75
PDPN-205ENST00000487038 GAS2L2Q8NHY3 880 aa10.34□□□□□ -0.75
PDPN-205ENST00000487038 C7orf43Q8WVR3 580 aa10.34□□□□□ -0.75
PDPN-205ENST00000487038 TIMELESSQ9UNS1 1208 aa10.34□□□□□ -0.75
PDPN-205ENST00000487038 AKAP11Q9UKA4 1901 aa10.33□□□□□ -0.76
PDPN-205ENST00000487038 GNAT3A8MTJ3 354 aa10.33□□□□□ -0.76
PDPN-205ENST00000487038 DIAPH1O60610 1272 aaKnown RBP10.33□□□□□ -0.76
PDPN-205ENST00000487038 MAP2K2P36507 400 aa10.33□□□□□ -0.76
PDPN-205ENST00000487038 CYP4F22Q6NT55 531 aa10.33□□□□□ -0.76
PDPN-205ENST00000487038 PSMD1Q99460 953 aa10.33□□□□□ -0.76
PDPN-205ENST00000487038 GJA3Q9Y6H8 435 aa10.33□□□□□ -0.76
PDPN-205ENST00000487038 TLL2Q9Y6L7 1015 aa10.33□□□□□ -0.76
PDPN-205ENST00000487038 RGL2O15211 777 aa10.32□□□□□ -0.76
PDPN-205ENST00000487038 A1BGP04217 495 aa10.32□□□□□ -0.76
PDPN-205ENST00000487038 GTF2E1P29083 439 aaPredicted RBP10.32□□□□□ -0.76
PDPN-205ENST00000487038 EIF4G2P78344 907 aaKnown RBP eCLIP10.32□□□□□ -0.76
PDPN-205ENST00000487038 GRIPAP1Q4V328 841 aa10.32□□□□□ -0.76
PDPN-205ENST00000487038 CC2D2BQ6DHV5 1058 aa10.32□□□□□ -0.76
PDPN-205ENST00000487038 USP50Q70EL3 339 aaPredicted RBP10.32□□□□□ -0.76
PDPN-205ENST00000487038 SYNE4Q8N205 404 aa10.32□□□□□ -0.76
PDPN-205ENST00000487038 SNED1Q8TER0 1413 aa10.32□□□□□ -0.76
PDPN-205ENST00000487038 KLRG2A4D1S0 409 aaPredicted RBP10.31□□□□□ -0.76
PDPN-205ENST00000487038 BRPF1P55201 1214 aaPredicted RBP10.31□□□□□ -0.76
PDPN-205ENST00000487038 MCOLN1Q9GZU1 580 aa10.31□□□□□ -0.76
PDPN-205ENST00000487038 NIP7Q9Y221 180 aaKnown RBP eCLIP10.31□□□□□ -0.76
PDPN-205ENST00000487038 COL4A5P29400 1685 aa10.31□□□□□ -0.76
PDPN-205ENST00000487038 BTBD11A6QL63 1104 aa10.3□□□□□ -0.76
PDPN-205ENST00000487038 SCNN1DP51172 638 aa10.3□□□□□ -0.76
PDPN-205ENST00000487038 DGKZQ13574 1117 aa10.3□□□□□ -0.76
PDPN-205ENST00000487038 HHIPL1Q96JK4 782 aa10.3□□□□□ -0.76
PDPN-205ENST00000487038 NYXQ9GZU5 481 aa10.3□□□□□ -0.76
PDPN-205ENST00000487038 TSKSQ9UJT2 592 aa10.3□□□□□ -0.76
PDPN-205ENST00000487038 RIC1Q4ADV7 1423 aa10.3□□□□□ -0.76
PDPN-205ENST00000487038 DDX60Q8IY21 1712 aaKnown RBP10.3□□□□□ -0.76
PDPN-205ENST00000487038 CEMIPQ8WUJ3 1361 aa10.29□□□□□ -0.76
PDPN-205ENST00000487038 OLFM4Q6UX06 510 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms