RNA–Protein interactions for RNA: ENST00000486889.1

CTPS1-210, Transcript of CTP synthase 1, humanhuman

TSL 2

Gene CTPS1, Length 568 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-210ENST00000486889 MRPL50Q8N5N7 158 aaKnown RBP12.36□□□□□ -0.43
CTPS1-210ENST00000486889 PLBD2Q8NHP8 589 aa12.36□□□□□ -0.43
CTPS1-210ENST00000486889 XAGE3Q8WTP9 111 aa12.36□□□□□ -0.43
CTPS1-210ENST00000486889 BCL2L13Q9BXK5 485 aa12.36□□□□□ -0.43
CTPS1-210ENST00000486889 COL5A3P25940 1745 aaPredicted RBP12.35□□□□□ -0.43
CTPS1-210ENST00000486889 TCERG1O14776 1098 aaKnown RBP12.35□□□□□ -0.43
CTPS1-210ENST00000486889 NPHP1O15259 732 aa12.35□□□□□ -0.43
CTPS1-210ENST00000486889 KSR2Q6VAB6 950 aa12.35□□□□□ -0.43
CTPS1-210ENST00000486889 SLC16A10Q8TF71 515 aa12.35□□□□□ -0.43
CTPS1-210ENST00000486889 NOB1Q9ULX3 412 aaKnown RBP12.35□□□□□ -0.43
CTPS1-210ENST00000486889 TAF1LQ8IZX4 1826 aa12.34□□□□□ -0.43
CTPS1-210ENST00000486889 CCT4P50991 539 aaKnown RBP12.34□□□□□ -0.43
CTPS1-210ENST00000486889 MAPK8IP2Q13387 824 aaPredicted RBP12.34□□□□□ -0.43
CTPS1-210ENST00000486889 ATF7IPQ6VMQ6 1270 aa12.34□□□□□ -0.43
CTPS1-210ENST00000486889 NLGN1Q8N2Q7 840 aa12.34□□□□□ -0.43
CTPS1-210ENST00000486889 AKT1S1Q96B36 256 aa12.34□□□□□ -0.43
CTPS1-210ENST00000486889 NARFQ9UHQ1 456 aa12.34□□□□□ -0.43
CTPS1-210ENST00000486889 MAP3K15Q6ZN16 1313 aa12.34□□□□□ -0.43
CTPS1-210ENST00000486889 NBPF26B4DH59 902 aa12.33□□□□□ -0.44
CTPS1-210ENST00000486889 BCAR3O75815 825 aa12.33□□□□□ -0.44
CTPS1-210ENST00000486889 PDIA6Q15084 440 aa12.33□□□□□ -0.44
CTPS1-210ENST00000486889 NBPF10Q6P3W6 841 aaKnown RBP12.33□□□□□ -0.44
CTPS1-210ENST00000486889 NBPF15Q8N660 670 aa12.33□□□□□ -0.44
CTPS1-210ENST00000486889 DNAAF4Q8WXU2 420 aa12.33□□□□□ -0.44
CTPS1-210ENST00000486889 ARHGEF1Q92888 912 aaKnown RBP12.33□□□□□ -0.44
CTPS1-210ENST00000486889 TBC1D2BQ9UPU7 963 aa12.33□□□□□ -0.44
CTPS1-210ENST00000486889 PI4KAP2A4QPH2 592 aa12.32□□□□□ -0.44
CTPS1-210ENST00000486889 PIP4K2AP48426 406 aaPredicted RBP12.32□□□□□ -0.44
CTPS1-210ENST00000486889 PDE3AQ14432 1141 aa12.32□□□□□ -0.44
CTPS1-210ENST00000486889 PARP10Q53GL7 1025 aa12.32□□□□□ -0.44
CTPS1-210ENST00000486889 SLC4A10Q6U841 1118 aa12.32□□□□□ -0.44
CTPS1-210ENST00000486889 GIGYF2Q6Y7W6 1299 aaKnown RBP12.32□□□□□ -0.44
CTPS1-210ENST00000486889 PPP1R42Q7Z4L9 355 aa12.32□□□□□ -0.44
CTPS1-210ENST00000486889 DZIP1LQ8IYY4 767 aaKnown RBP12.32□□□□□ -0.44
CTPS1-210ENST00000486889 PI4KAP1Q8N8J0 262 aa12.32□□□□□ -0.44
CTPS1-210ENST00000486889 SETDB2Q96T68 719 aa12.32□□□□□ -0.44
CTPS1-210ENST00000486889 NYXQ9GZU5 481 aa12.32□□□□□ -0.44
CTPS1-210ENST00000486889 ZBTB3Q9H5J0 574 aa12.32□□□□□ -0.44
CTPS1-210ENST00000486889 PHAXQ9H814 394 aaKnown RBP12.32□□□□□ -0.44
CTPS1-210ENST00000486889 ANXA1P04083 346 aa12.31□□□□□ -0.44
CTPS1-210ENST00000486889 GTF2E1P29083 439 aaPredicted RBP12.31□□□□□ -0.44
CTPS1-210ENST00000486889 PROSER3Q2NL68 480 aa12.31□□□□□ -0.44
CTPS1-210ENST00000486889 SRCIN1Q9C0H9 1055 aa12.31□□□□□ -0.44
CTPS1-210ENST00000486889 MAP3K2Q9Y2U5 619 aa12.31□□□□□ -0.44
CTPS1-210ENST00000486889 USP42Q9H9J4 1324 aaKnown RBP12.31□□□□□ -0.44
CTPS1-210ENST00000486889 ZBTB7AO95365 584 aa12.3□□□□□ -0.44
CTPS1-210ENST00000486889 POLD1P28340 1107 aa12.3□□□□□ -0.44
CTPS1-210ENST00000486889 TCIRG1Q13488 830 aa12.3□□□□□ -0.44
CTPS1-210ENST00000486889 ZNF827Q17R98 1081 aa12.3□□□□□ -0.44
CTPS1-210ENST00000486889 USPL1Q5W0Q7 1092 aa12.3□□□□□ -0.44
CTPS1-210ENST00000486889 LINS1Q8NG48 757 aa12.3□□□□□ -0.44
CTPS1-210ENST00000486889 METTL22Q9BUU2 404 aaPredicted RBP12.3□□□□□ -0.44
CTPS1-210ENST00000486889 ANO8Q9HCE9 1232 aaPredicted RBP12.3□□□□□ -0.44
CTPS1-210ENST00000486889 ATF5Q9Y2D1 282 aaPredicted RBP12.3□□□□□ -0.44
CTPS1-210ENST00000486889 ALDH1L1O75891 902 aa12.29□□□□□ -0.44
CTPS1-210ENST00000486889 RRP1P56182 461 aaKnown RBP12.29□□□□□ -0.44
CTPS1-210ENST00000486889 AAMPQ13685 434 aa12.29□□□□□ -0.44
CTPS1-210ENST00000486889 TPTE2Q6XPS3 522 aa12.29□□□□□ -0.44
CTPS1-210ENST00000486889 CCDC191Q8NCU4 936 aa12.29□□□□□ -0.44
CTPS1-210ENST00000486889 C9orf78Q9NZ63 289 aaPredicted RBP12.29□□□□□ -0.44
CTPS1-210ENST00000486889 NIP7Q9Y221 180 aaKnown RBP eCLIP12.29□□□□□ -0.44
CTPS1-210ENST00000486889 SUPT16HQ9Y5B9 1047 aaKnown RBP12.29□□□□□ -0.44
CTPS1-210ENST00000486889 PARP3Q9Y6F1 533 aa12.29□□□□□ -0.44
CTPS1-210ENST00000486889 RNF123Q5XPI4 1314 aa12.29□□□□□ -0.44
CTPS1-210ENST00000486889 PXDNLA1KZ92 1463 aa12.28□□□□□ -0.44
CTPS1-210ENST00000486889 CAMTA2O94983 1202 aa12.28□□□□□ -0.44
CTPS1-210ENST00000486889 TTLL7Q6ZT98 887 aa12.28□□□□□ -0.44
CTPS1-210ENST00000486889 G2E3Q7L622 706 aa12.28□□□□□ -0.44
CTPS1-210ENST00000486889 COL23A1Q86Y22 540 aaPredicted RBP12.28□□□□□ -0.44
CTPS1-210ENST00000486889 ITPRIPQ8IWB1 547 aa12.28□□□□□ -0.44
CTPS1-210ENST00000486889 MYD88Q99836 296 aa12.28□□□□□ -0.44
CTPS1-210ENST00000486889 CWC25Q9NXE8 425 aaPredicted RBP12.28□□□□□ -0.44
CTPS1-210ENST00000486889 DDX19BQ9UMR2 479 aa12.28□□□□□ -0.44
CTPS1-210ENST00000486889 PNPLA7Q6ZV29 1317 aa12.28□□□□□ -0.44
CTPS1-210ENST00000486889 GNAI3P08754 354 aa12.27□□□□□ -0.45
CTPS1-210ENST00000486889 TRIM27P14373 513 aa12.27□□□□□ -0.45
CTPS1-210ENST00000486889 TRIM28Q13263 835 aaKnown RBP12.27□□□□□ -0.45
CTPS1-210ENST00000486889 LRP10Q7Z4F1 713 aa12.27□□□□□ -0.45
CTPS1-210ENST00000486889 CLUAP1Q96AJ1 413 aa12.27□□□□□ -0.45
CTPS1-210ENST00000486889 PDGFDQ9GZP0 370 aaPredicted RBP12.27□□□□□ -0.45
CTPS1-210ENST00000486889 QSER1Q2KHR3 1735 aa12.27□□□□□ -0.45
CTPS1-210ENST00000486889 CARMIL3Q8ND23 1372 aa12.27□□□□□ -0.45
CTPS1-210ENST00000486889 UBR3Q6ZT12 1888 aa12.27□□□□□ -0.45
CTPS1-210ENST00000486889 ST5P78524 1137 aa12.26□□□□□ -0.45
CTPS1-210ENST00000486889 NBPF5PQ86XG9 351 aaPredicted RBP12.26□□□□□ -0.45
CTPS1-210ENST00000486889 UTP14AQ9BVJ6 771 aaKnown RBP12.26□□□□□ -0.45
CTPS1-210ENST00000486889 MTFR1LQ9H019 292 aa12.26□□□□□ -0.45
CTPS1-210ENST00000486889 MYH14Q7Z406 1995 aaKnown RBP12.26□□□□□ -0.45
CTPS1-210ENST00000486889 ATP10DQ9P241 1426 aa12.26□□□□□ -0.45
CTPS1-210ENST00000486889 F6X3S4 739 aa12.25□□□□□ -0.45
CTPS1-210ENST00000486889 GYS1P13807 737 aa12.25□□□□□ -0.45
CTPS1-210ENST00000486889 INTS3Q68E01 1043 aaKnown RBP12.25□□□□□ -0.45
CTPS1-210ENST00000486889 BICDL1Q6ZP65 573 aa12.25□□□□□ -0.45
CTPS1-210ENST00000486889 TRMT112Q9UI30 125 aaKnown RBP12.25□□□□□ -0.45
CTPS1-210ENST00000486889 PDZRN3Q9UPQ7 1066 aa12.25□□□□□ -0.45
CTPS1-210ENST00000486889 ABCC4O15439 1325 aa12.25□□□□□ -0.45
CTPS1-210ENST00000486889 ADCY9O60503 1353 aa12.24□□□□□ -0.45
CTPS1-210ENST00000486889 UBTFL1P0CB47 393 aaPredicted RBP12.24□□□□□ -0.45
CTPS1-210ENST00000486889 GPTP24298 496 aa12.24□□□□□ -0.45
CTPS1-210ENST00000486889 MVPQ14764 893 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms