RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 SPG7Q9UQ90 795 aa21.86■■□□□ 1.09
PDLIM7-207ENST00000486828 PLEKHG2Q9H7P9 1386 aa21.86■■□□□ 1.09
PDLIM7-207ENST00000486828 MAP4K4O95819 1239 aaPredicted RBP21.86■■□□□ 1.09
PDLIM7-207ENST00000486828 PHKG2P15735 406 aa21.86■■□□□ 1.09
PDLIM7-207ENST00000486828 PKP1Q13835 747 aa21.86■■□□□ 1.09
PDLIM7-207ENST00000486828 MEGF6O75095 1541 aa21.85■■□□□ 1.09
PDLIM7-207ENST00000486828 C5P01031 1676 aa21.85■■□□□ 1.09
PDLIM7-207ENST00000486828 KLHL40Q2TBA0 621 aa21.85■■□□□ 1.09
PDLIM7-207ENST00000486828 ERC1Q8IUD2 1116 aa21.85■■□□□ 1.09
PDLIM7-207ENST00000486828 GRPEL1Q9HAV7 217 aa21.85■■□□□ 1.09
PDLIM7-207ENST00000486828 TNS3Q68CZ2 1445 aa21.85■■□□□ 1.09
PDLIM7-207ENST00000486828 SPATA31A3Q5VYP0 1347 aa21.85■■□□□ 1.09
PDLIM7-207ENST00000486828 GRM8O00222 908 aa21.84■■□□□ 1.09
PDLIM7-207ENST00000486828 SGSM2O43147 1006 aa21.84■■□□□ 1.09
PDLIM7-207ENST00000486828 HSPA4P34932 840 aa21.84■■□□□ 1.09
PDLIM7-207ENST00000486828 CUL4AQ13619 759 aa21.84■■□□□ 1.09
PDLIM7-207ENST00000486828 CLASRPQ8N2M8 674 aaKnown RBP21.84■■□□□ 1.09
PDLIM7-207ENST00000486828 AHDC1Q5TGY3 1603 aaPredicted RBP21.84■■□□□ 1.09
PDLIM7-207ENST00000486828 GLRX3O76003 335 aaKnown RBP21.84■■□□□ 1.09
PDLIM7-207ENST00000486828 FAM43AQ8N2R8 423 aa21.84■■□□□ 1.09
PDLIM7-207ENST00000486828 SLC39A6Q13433 755 aa21.83■■□□□ 1.09
PDLIM7-207ENST00000486828 MCTP1Q6DN14 999 aa21.83■■□□□ 1.09
PDLIM7-207ENST00000486828 ZDHHC9Q9Y397 364 aa21.83■■□□□ 1.09
PDLIM7-207ENST00000486828 RAD50Q92878 1312 aa21.83■■□□□ 1.09
PDLIM7-207ENST00000486828 IFNL2Q8IZJ0 200 aa21.82■■□□□ 1.08
PDLIM7-207ENST00000486828 SUCLG2Q96I99 432 aa21.82■■□□□ 1.08
PDLIM7-207ENST00000486828 PANK2Q9BZ23 570 aa21.82■■□□□ 1.08
PDLIM7-207ENST00000486828 MRC1P22897 1456 aa21.82■■□□□ 1.08
PDLIM7-207ENST00000486828 AIMP1Q12904 312 aaKnown RBP21.82■■□□□ 1.08
PDLIM7-207ENST00000486828 DDX49Q9Y6V7 483 aaKnown RBP21.82■■□□□ 1.08
PDLIM7-207ENST00000486828 INTS4Q96HW7 963 aaKnown RBP21.81■■□□□ 1.08
PDLIM7-207ENST00000486828 PA2G4Q9UQ80 394 aaKnown RBP21.81■■□□□ 1.08
PDLIM7-207ENST00000486828 CSB-PGBD3P0DP91 1061 aa21.8■■□□□ 1.08
PDLIM7-207ENST00000486828 HSPA1LP34931 641 aa21.8■■□□□ 1.08
PDLIM7-207ENST00000486828 LARP1Q6PKG0 1096 aaKnown RBP21.8■■□□□ 1.08
PDLIM7-207ENST00000486828 ILDR1Q86SU0 546 aaPredicted RBP21.8■■□□□ 1.08
PDLIM7-207ENST00000486828 NFATC2IPQ8NCF5 419 aa21.8■■□□□ 1.08
PDLIM7-207ENST00000486828 KAZALD1Q96I82 304 aa21.8■■□□□ 1.08
PDLIM7-207ENST00000486828 ECHDC1Q9NTX5 307 aa21.8■■□□□ 1.08
PDLIM7-207ENST00000486828 RIC3Q7Z5B4 369 aa21.8■■□□□ 1.08
PDLIM7-207ENST00000486828 GAS2L3Q86XJ1 694 aa21.8■■□□□ 1.08
PDLIM7-207ENST00000486828 GPATCH3Q96I76 525 aa21.8■■□□□ 1.08
PDLIM7-207ENST00000486828 LSG1Q9H089 658 aaKnown RBP21.8■■□□□ 1.08
PDLIM7-207ENST00000486828 LMBRD1Q9NUN5 540 aa21.8■■□□□ 1.08
PDLIM7-207ENST00000486828 IGKV5-2P06315 115 aa21.79■■□□□ 1.08
PDLIM7-207ENST00000486828 BICC1Q9H694 974 aaKnown RBP21.79■■□□□ 1.08
PDLIM7-207ENST00000486828 PKD1L3Q7Z443 1732 aa21.79■■□□□ 1.08
PDLIM7-207ENST00000486828 IFIT2P09913 472 aaKnown RBP21.78■■□□□ 1.08
PDLIM7-207ENST00000486828 CABLES1Q8TDN4 633 aa21.78■■□□□ 1.08
PDLIM7-207ENST00000486828 DCAF5Q96JK2 942 aa21.78■■□□□ 1.08
PDLIM7-207ENST00000486828 UPF3BQ9BZI7 483 aaKnown RBP21.78■■□□□ 1.08
PDLIM7-207ENST00000486828 NEXNQ0ZGT2 675 aa21.77■■□□□ 1.08
PDLIM7-207ENST00000486828 ZNF496Q96IT1 587 aaPredicted RBP21.77■■□□□ 1.08
PDLIM7-207ENST00000486828 MYL6BP14649 208 aa21.76■■□□□ 1.07
PDLIM7-207ENST00000486828 CWC27Q6UX04 472 aaKnown RBP21.76■■□□□ 1.07
PDLIM7-207ENST00000486828 KIAA1211Q6ZU35 1233 aa21.76■■□□□ 1.07
PDLIM7-207ENST00000486828 XAGE3Q8WTP9 111 aa21.76■■□□□ 1.07
PDLIM7-207ENST00000486828 PHLPP1O60346 1717 aa21.76■■□□□ 1.07
PDLIM7-207ENST00000486828 CPDO75976 1380 aa21.76■■□□□ 1.07
PDLIM7-207ENST00000486828 NEURL1BA8MQ27 555 aa21.76■■□□□ 1.07
PDLIM7-207ENST00000486828 CYP27B1O15528 508 aa21.76■■□□□ 1.07
PDLIM7-207ENST00000486828 SNRPA1P09661 255 aaKnown RBP21.76■■□□□ 1.07
PDLIM7-207ENST00000486828 CHRNA2Q15822 529 aa21.76■■□□□ 1.07
PDLIM7-207ENST00000486828 AACSQ86V21 672 aa21.76■■□□□ 1.07
PDLIM7-207ENST00000486828 RUFY2Q8WXA3 655 aa21.76■■□□□ 1.07
PDLIM7-207ENST00000486828 METTL22Q9BUU2 404 aaPredicted RBP21.76■■□□□ 1.07
PDLIM7-207ENST00000486828 DIAPH3Q9NSV4 1193 aa21.76■■□□□ 1.07
PDLIM7-207ENST00000486828 SNX14Q9Y5W7 946 aa21.76■■□□□ 1.07
PDLIM7-207ENST00000486828 BRD1O95696 1058 aa21.75■■□□□ 1.07
PDLIM7-207ENST00000486828 G3BP1Q13283 466 aaKnown RBP eCLIP21.75■■□□□ 1.07
PDLIM7-207ENST00000486828 NOL8Q76FK4 1167 aaKnown RBP21.75■■□□□ 1.07
PDLIM7-207ENST00000486828 TTC5Q8N0Z6 440 aa21.75■■□□□ 1.07
PDLIM7-207ENST00000486828 COL16A1Q07092 1604 aaPredicted RBP21.75■■□□□ 1.07
PDLIM7-207ENST00000486828 SASH1O94885 1247 aa21.74■■□□□ 1.07
PDLIM7-207ENST00000486828 GCKRQ14397 625 aa21.74■■□□□ 1.07
PDLIM7-207ENST00000486828 COPS6Q7L5N1 327 aa21.74■■□□□ 1.07
PDLIM7-207ENST00000486828 LRP10Q7Z4F1 713 aa21.74■■□□□ 1.07
PDLIM7-207ENST00000486828 EVI5LQ96CN4 794 aa21.74■■□□□ 1.07
PDLIM7-207ENST00000486828 FMNL2Q96PY5 1086 aa21.73■■□□□ 1.07
PDLIM7-207ENST00000486828 MYD88Q99836 296 aa21.73■■□□□ 1.07
PDLIM7-207ENST00000486828 USP16Q9Y5T5 823 aa21.72■■□□□ 1.07
PDLIM7-207ENST00000486828 PRPF40AO75400 957 aaKnown RBP21.72■■□□□ 1.07
PDLIM7-207ENST00000486828 EAF2Q96CJ1 260 aaPredicted RBP21.72■■□□□ 1.07
PDLIM7-207ENST00000486828 TTC14Q96N46 770 aa21.72■■□□□ 1.07
PDLIM7-207ENST00000486828 PARP4Q9UKK3 1724 aaKnown RBP21.72■■□□□ 1.07
PDLIM7-207ENST00000486828 ZNF445P59923 1031 aa21.71■■□□□ 1.07
PDLIM7-207ENST00000486828 ANKRD13DQ6ZTN6 518 aa21.71■■□□□ 1.07
PDLIM7-207ENST00000486828 RASEFQ8IZ41 740 aa21.71■■□□□ 1.07
PDLIM7-207ENST00000486828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.7■■□□□ 1.07
PDLIM7-207ENST00000486828 CABP4P57796 275 aa21.7■■□□□ 1.06
PDLIM7-207ENST00000486828 NCLP19338 710 aaKnown RBP21.69■■□□□ 1.06
PDLIM7-207ENST00000486828 CAVIN1Q6NZI2 390 aaKnown RBP21.69■■□□□ 1.06
PDLIM7-207ENST00000486828 GLI3P10071 1580 aa21.69■■□□□ 1.06
PDLIM7-207ENST00000486828 LAMB4A4D0S4 1761 aa21.69■■□□□ 1.06
PDLIM7-207ENST00000486828 HIP1O00291 1037 aa21.68■■□□□ 1.06
PDLIM7-207ENST00000486828 COL15A1P39059 1388 aa21.68■■□□□ 1.06
PDLIM7-207ENST00000486828 ZSCAN23Q3MJ62 389 aa21.68■■□□□ 1.06
PDLIM7-207ENST00000486828 EPHA10Q5JZY3 1008 aa21.68■■□□□ 1.06
PDLIM7-207ENST00000486828 FOXD4L5Q5VV16 416 aaPredicted RBP21.68■■□□□ 1.06
PDLIM7-207ENST00000486828 GPT2Q8TD30 523 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms