RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 GNAT3A8MTJ3 354 aa9.21□□□□□ -0.93
TMC1-204ENST00000486417 METTL3Q86U44 580 aaKnown RBP9.21□□□□□ -0.93
TMC1-204ENST00000486417 MRPL50Q8N5N7 158 aaKnown RBP9.21□□□□□ -0.93
TMC1-204ENST00000486417 SOS2Q07890 1332 aaPredicted RBP9.21□□□□□ -0.93
TMC1-204ENST00000486417 CPDO75976 1380 aa9.21□□□□□ -0.94
TMC1-204ENST00000486417 OVOS2A0A0G2JMS6 1433 aa9.21□□□□□ -0.94
TMC1-204ENST00000486417 SCN11AQ9UI33 1791 aa9.21□□□□□ -0.94
TMC1-204ENST00000486417 ZC3H6P61129 1189 aaKnown RBP9.21□□□□□ -0.94
TMC1-204ENST00000486417 AXIN2Q9Y2T1 843 aa9.21□□□□□ -0.94
TMC1-204ENST00000486417 LTBP4Q8N2S1 1624 aa9.2□□□□□ -0.94
TMC1-204ENST00000486417 CEMIPQ8WUJ3 1361 aa9.2□□□□□ -0.94
TMC1-204ENST00000486417 AHDC1Q5TGY3 1603 aaPredicted RBP9.2□□□□□ -0.94
TMC1-204ENST00000486417 ELL2O00472 640 aaPredicted RBP9.2□□□□□ -0.94
TMC1-204ENST00000486417 IPO8O15397 1037 aaKnown RBP9.2□□□□□ -0.94
TMC1-204ENST00000486417 GPCPD1Q9NPB8 672 aa9.2□□□□□ -0.94
TMC1-204ENST00000486417 SLAIN2Q9P270 581 aa9.2□□□□□ -0.94
TMC1-204ENST00000486417 FAM198AQ9UFP1 575 aa9.2□□□□□ -0.94
TMC1-204ENST00000486417 LHX6Q9UPM6 363 aa9.2□□□□□ -0.94
TMC1-204ENST00000486417 ADGRG1Q9Y653 693 aa9.2□□□□□ -0.94
TMC1-204ENST00000486417 COL9A1P20849 921 aa9.19□□□□□ -0.94
TMC1-204ENST00000486417 KRT24Q2M2I5 525 aa9.19□□□□□ -0.94
TMC1-204ENST00000486417 TMEM57Q8N5G2 664 aa9.19□□□□□ -0.94
TMC1-204ENST00000486417 CABLES1Q8TDN4 633 aa9.19□□□□□ -0.94
TMC1-204ENST00000486417 ARHGAP45Q92619 1136 aa9.19□□□□□ -0.94
TMC1-204ENST00000486417 TSPYL4Q9UJ04 414 aa9.19□□□□□ -0.94
TMC1-204ENST00000486417 PLEKHG2Q9H7P9 1386 aa9.19□□□□□ -0.94
TMC1-204ENST00000486417 RGS12O14924 1447 aa9.19□□□□□ -0.94
TMC1-204ENST00000486417 MEGF6O75095 1541 aa9.18□□□□□ -0.94
TMC1-204ENST00000486417 COL22A1Q8NFW1 1626 aaPredicted RBP9.18□□□□□ -0.94
TMC1-204ENST00000486417 CACNA1FO60840 1977 aa9.18□□□□□ -0.94
TMC1-204ENST00000486417 C3orf80F5H4A9 247 aa9.18□□□□□ -0.94
TMC1-204ENST00000486417 TCERG1O14776 1098 aaKnown RBP9.18□□□□□ -0.94
TMC1-204ENST00000486417 SSTR3P32745 418 aaPredicted RBP9.18□□□□□ -0.94
TMC1-204ENST00000486417 DOK7Q18PE1 504 aa9.18□□□□□ -0.94
TMC1-204ENST00000486417 ITPRIPQ8IWB1 547 aa9.18□□□□□ -0.94
TMC1-204ENST00000486417 TTC13Q8NBP0 860 aa9.18□□□□□ -0.94
TMC1-204ENST00000486417 IL17REQ8NFR9 667 aa9.18□□□□□ -0.94
TMC1-204ENST00000486417 PXYLP1Q8TE99 480 aa9.18□□□□□ -0.94
TMC1-204ENST00000486417 DDX19BQ9UMR2 479 aa9.18□□□□□ -0.94
TMC1-204ENST00000486417 RBM19Q9Y4C8 960 aaKnown RBP9.18□□□□□ -0.94
TMC1-204ENST00000486417 ABCC4O15439 1325 aa9.18□□□□□ -0.94
TMC1-204ENST00000486417 CLCN1P35523 988 aa9.17□□□□□ -0.94
TMC1-204ENST00000486417 AMOTQ4VCS5 1084 aa9.17□□□□□ -0.94
TMC1-204ENST00000486417 PLEKHO1Q53GL0 409 aaPredicted RBP9.17□□□□□ -0.94
TMC1-204ENST00000486417 AKAP4Q5JQC9 854 aa9.17□□□□□ -0.94
TMC1-204ENST00000486417 ZNF530Q6P9A1 599 aaPredicted RBP9.17□□□□□ -0.94
TMC1-204ENST00000486417 C1orf115Q9H7X2 142 aa9.17□□□□□ -0.94
TMC1-204ENST00000486417 BABAM1Q9NWV8 329 aa9.17□□□□□ -0.94
TMC1-204ENST00000486417 MIS18AQ9NYP9 233 aa9.17□□□□□ -0.94
TMC1-204ENST00000486417 SHANK3Q9BYB0 1731 aa9.17□□□□□ -0.94
TMC1-204ENST00000486417 IGHDP01880 384 aa9.16□□□□□ -0.94
TMC1-204ENST00000486417 API5Q9BZZ5 524 aaKnown RBP9.16□□□□□ -0.94
TMC1-204ENST00000486417 PCDHB15Q9Y5E8 787 aa9.16□□□□□ -0.94
TMC1-204ENST00000486417 COL5A2P05997 1499 aaPredicted RBP9.16□□□□□ -0.94
TMC1-204ENST00000486417 MRC1P22897 1456 aa9.16□□□□□ -0.94
TMC1-204ENST00000486417 TAF7Q15545 349 aaPredicted RBP9.15□□□□□ -0.94
TMC1-204ENST00000486417 CHRNA2Q15822 529 aa9.15□□□□□ -0.94
TMC1-204ENST00000486417 SKAP1Q86WV1 359 aa9.15□□□□□ -0.94
TMC1-204ENST00000486417 FAM217BQ9NTX9 383 aaPredicted RBP9.15□□□□□ -0.94
TMC1-204ENST00000486417 WNK3Q9BYP7 1800 aa9.15□□□□□ -0.94
TMC1-204ENST00000486417 COL14A1Q05707 1796 aaKnown RBP9.15□□□□□ -0.94
TMC1-204ENST00000486417 C5P01031 1676 aa9.15□□□□□ -0.94
TMC1-204ENST00000486417 COL16A1Q07092 1604 aaPredicted RBP9.15□□□□□ -0.94
TMC1-204ENST00000486417 SOS1Q07889 1333 aaPredicted RBP9.15□□□□□ -0.95
TMC1-204ENST00000486417 C1orf141Q5JVX7 400 aa9.15□□□□□ -0.95
TMC1-204ENST00000486417 BEGAINQ9BUH8 593 aa9.15□□□□□ -0.95
TMC1-204ENST00000486417 NLRP2Q9NX02 1062 aa9.15□□□□□ -0.95
TMC1-204ENST00000486417 PHLPP1O60346 1717 aa9.15□□□□□ -0.95
TMC1-204ENST00000486417 PLCH1Q4KWH8 1693 aa9.15□□□□□ -0.95
TMC1-204ENST00000486417 PTPRCP08575 1304 aa9.14□□□□□ -0.95
TMC1-204ENST00000486417 RNMTO43148 476 aaKnown RBP9.14□□□□□ -0.95
TMC1-204ENST00000486417 CSB-PGBD3P0DP91 1061 aa9.14□□□□□ -0.95
TMC1-204ENST00000486417 PRSS12P56730 875 aa9.14□□□□□ -0.95
TMC1-204ENST00000486417 LGR6Q9HBX8 967 aa9.14□□□□□ -0.95
TMC1-204ENST00000486417 ZBTB40Q9NUA8 1239 aa9.14□□□□□ -0.95
TMC1-204ENST00000486417 KDM6AO15550 1401 aaPredicted RBP9.13□□□□□ -0.95
TMC1-204ENST00000486417 ONECUT3O60422 494 aaPredicted RBP9.13□□□□□ -0.95
TMC1-204ENST00000486417 TATP17735 454 aaPredicted RBP9.13□□□□□ -0.95
TMC1-204ENST00000486417 MPRIPQ6WCQ1 1025 aa9.13□□□□□ -0.95
TMC1-204ENST00000486417 PROCA1Q8NCQ7 364 aaPredicted RBP9.13□□□□□ -0.95
TMC1-204ENST00000486417 CERKQ8TCT0 537 aa9.13□□□□□ -0.95
TMC1-204ENST00000486417 RAPGEF4Q8WZA2 1011 aa9.13□□□□□ -0.95
TMC1-204ENST00000486417 RWDD1Q9H446 243 aaPredicted RBP9.13□□□□□ -0.95
TMC1-204ENST00000486417 GOPCQ9HD26 462 aa9.13□□□□□ -0.95
TMC1-204ENST00000486417 PRDM11Q9NQV5 511 aa9.13□□□□□ -0.95
TMC1-204ENST00000486417 LAMB4A4D0S4 1761 aa9.13□□□□□ -0.95
TMC1-204ENST00000486417 PXDNLA1KZ92 1463 aa9.13□□□□□ -0.95
TMC1-204ENST00000486417 PAPPAQ13219 1627 aa9.12□□□□□ -0.95
TMC1-204ENST00000486417 GLI3P10071 1580 aa9.12□□□□□ -0.95
TMC1-204ENST00000486417 WDR17Q8IZU2 1322 aa9.12□□□□□ -0.95
TMC1-204ENST00000486417 OATP04181 439 aa9.12□□□□□ -0.95
TMC1-204ENST00000486417 TEFQ10587 303 aa9.12□□□□□ -0.95
TMC1-204ENST00000486417 ZNF710Q8N1W2 664 aa9.12□□□□□ -0.95
TMC1-204ENST00000486417 CHMP4BQ9H444 224 aaKnown RBP9.12□□□□□ -0.95
TMC1-204ENST00000486417 ZSWIM6Q9HCJ5 1215 aa9.12□□□□□ -0.95
TMC1-204ENST00000486417 TSKSQ9UJT2 592 aa9.12□□□□□ -0.95
TMC1-204ENST00000486417 ZBTB7BO15156 539 aaPredicted RBP9.11□□□□□ -0.95
TMC1-204ENST00000486417 EIF4A1P60842 406 aaKnown RBP9.11□□□□□ -0.95
TMC1-204ENST00000486417 HDAC1Q13547 482 aaPredicted RBP9.11□□□□□ -0.95
TMC1-204ENST00000486417 SH3D19Q5HYK7 790 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms