RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 LARP6Q9BRS8 491 aaKnown RBP21.16■□□□□ 0.98
TNXB-205ENST00000486148 C9orf78Q9NZ63 289 aaPredicted RBP21.16■□□□□ 0.98
TNXB-205ENST00000486148 TTC41PQ6P2S7 1318 aa21.16■□□□□ 0.98
TNXB-205ENST00000486148 GLRX3O76003 335 aaKnown RBP21.15■□□□□ 0.98
TNXB-205ENST00000486148 ANKRD24Q8TF21 1146 aa21.15■□□□□ 0.98
TNXB-205ENST00000486148 GDPD2Q9HCC8 539 aa21.15■□□□□ 0.98
TNXB-205ENST00000486148 NCAPD2Q15021 1401 aa21.15■□□□□ 0.98
TNXB-205ENST00000486148 AK2P54819 239 aa21.15■□□□□ 0.98
TNXB-205ENST00000486148 KSR2Q6VAB6 950 aa21.15■□□□□ 0.98
TNXB-205ENST00000486148 RPAP1Q9BWH6 1393 aaPredicted RBP21.15■□□□□ 0.98
TNXB-205ENST00000486148 HEG1Q9ULI3 1381 aa21.15■□□□□ 0.98
TNXB-205ENST00000486148 ALDH1L1O75891 902 aa21.14■□□□□ 0.98
TNXB-205ENST00000486148 CLASRPQ8N2M8 674 aaKnown RBP21.14■□□□□ 0.98
TNXB-205ENST00000486148 PDLIM2Q96JY6 352 aa21.14■□□□□ 0.97
TNXB-205ENST00000486148 WDR33Q9C0J8 1336 aaKnown RBP21.13■□□□□ 0.97
TNXB-205ENST00000486148 A0A0U1RQG5 324 aaPredicted RBP21.13■□□□□ 0.97
TNXB-205ENST00000486148 GADD45BO75293 160 aaPredicted RBP21.13■□□□□ 0.97
TNXB-205ENST00000486148 LMOD2Q6P5Q4 547 aa21.13■□□□□ 0.97
TNXB-205ENST00000486148 RUFY3Q7L099 469 aa21.13■□□□□ 0.97
TNXB-205ENST00000486148 AXIN2Q9Y2T1 843 aa21.13■□□□□ 0.97
TNXB-205ENST00000486148 CPA1P15085 419 aa21.13■□□□□ 0.97
TNXB-205ENST00000486148 DIAPH3Q9NSV4 1193 aa21.12■□□□□ 0.97
TNXB-205ENST00000486148 FAM13BQ9NYF5 915 aa21.12■□□□□ 0.97
TNXB-205ENST00000486148 PTH1RQ03431 593 aa21.12■□□□□ 0.97
TNXB-205ENST00000486148 ECHDC1Q9NTX5 307 aa21.12■□□□□ 0.97
TNXB-205ENST00000486148 SLIT3O75094 1523 aa21.12■□□□□ 0.97
TNXB-205ENST00000486148 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.12■□□□□ 0.97
TNXB-205ENST00000486148 OVOS2A0A0G2JMS6 1433 aa21.11■□□□□ 0.97
TNXB-205ENST00000486148 USP48Q86UV5 1035 aa21.11■□□□□ 0.97
TNXB-205ENST00000486148 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.11■□□□□ 0.97
TNXB-205ENST00000486148 KAZALD1Q96I82 304 aa21.11■□□□□ 0.97
TNXB-205ENST00000486148 TERF1P54274 439 aa21.1■□□□□ 0.97
TNXB-205ENST00000486148 SUCLG2Q96I99 432 aa21.1■□□□□ 0.97
TNXB-205ENST00000486148 LIMCH1Q9UPQ0 1083 aa21.1■□□□□ 0.97
TNXB-205ENST00000486148 IFIT2P09913 472 aaKnown RBP21.1■□□□□ 0.97
TNXB-205ENST00000486148 CASTP20810 708 aaKnown RBP21.1■□□□□ 0.97
TNXB-205ENST00000486148 TCHHQ07283 1943 aa21.09■□□□□ 0.97
TNXB-205ENST00000486148 AIMP1Q12904 312 aaKnown RBP21.09■□□□□ 0.97
TNXB-205ENST00000486148 AACSQ86V21 672 aa21.09■□□□□ 0.97
TNXB-205ENST00000486148 RNF214Q8ND24 703 aa21.09■□□□□ 0.97
TNXB-205ENST00000486148 SIPA1L3O60292 1781 aaPredicted RBP21.09■□□□□ 0.97
TNXB-205ENST00000486148 LARGE1O95461 756 aa21.09■□□□□ 0.97
TNXB-205ENST00000486148 HYPKQ9NX55 129 aa21.09■□□□□ 0.97
TNXB-205ENST00000486148 R3HCC1Q9Y3T6 440 aaKnown RBP21.09■□□□□ 0.97
TNXB-205ENST00000486148 ADCK5Q3MIX3 580 aa21.08■□□□□ 0.97
TNXB-205ENST00000486148 RUFY2Q8WXA3 655 aa21.08■□□□□ 0.97
TNXB-205ENST00000486148 GRM8O00222 908 aa21.08■□□□□ 0.96
TNXB-205ENST00000486148 PRPF40BQ6NWY9 871 aaKnown RBP21.08■□□□□ 0.96
TNXB-205ENST00000486148 ERC1Q8IUD2 1116 aa21.08■□□□□ 0.96
TNXB-205ENST00000486148 LINS1Q8NG48 757 aa21.08■□□□□ 0.96
TNXB-205ENST00000486148 BICC1Q9H694 974 aaKnown RBP21.08■□□□□ 0.96
TNXB-205ENST00000486148 SASH1O94885 1247 aa21.07■□□□□ 0.96
TNXB-205ENST00000486148 MSNP26038 577 aaKnown RBP21.07■□□□□ 0.96
TNXB-205ENST00000486148 PDIA6Q15084 440 aa21.07■□□□□ 0.96
TNXB-205ENST00000486148 HS1BP3Q53T59 392 aa21.07■□□□□ 0.96
TNXB-205ENST00000486148 ZNF142P52746 1687 aaPredicted RBP21.07■□□□□ 0.96
TNXB-205ENST00000486148 CAMTA1Q9Y6Y1 1673 aa21.07■□□□□ 0.96
TNXB-205ENST00000486148 DTNBO60941 627 aa21.07■□□□□ 0.96
TNXB-205ENST00000486148 GPATCH3Q96I76 525 aa21.07■□□□□ 0.96
TNXB-205ENST00000486148 ZSCAN22P10073 491 aaPredicted RBP21.06■□□□□ 0.96
TNXB-205ENST00000486148 SYT1P21579 422 aa21.06■□□□□ 0.96
TNXB-205ENST00000486148 MAP7D2Q96T17 732 aa21.06■□□□□ 0.96
TNXB-205ENST00000486148 DDX21Q9NR30 783 aaKnown RBP eCLIP21.06■□□□□ 0.96
TNXB-205ENST00000486148 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.06■□□□□ 0.96
TNXB-205ENST00000486148 CNPY2Q9Y2B0 182 aa21.06■□□□□ 0.96
TNXB-205ENST00000486148 JAKMIP1Q96N16 626 aaKnown RBP21.06■□□□□ 0.96
TNXB-205ENST00000486148 UTYO14607 1347 aa21.06■□□□□ 0.96
TNXB-205ENST00000486148 STX6O43752 255 aa21.05■□□□□ 0.96
TNXB-205ENST00000486148 SYAP1Q96A49 352 aaPredicted RBP21.05■□□□□ 0.96
TNXB-205ENST00000486148 EAF2Q96CJ1 260 aaPredicted RBP21.05■□□□□ 0.96
TNXB-205ENST00000486148 EVI5LQ96CN4 794 aa21.05■□□□□ 0.96
TNXB-205ENST00000486148 TSPY26PQ9H489 355 aa21.05■□□□□ 0.96
TNXB-205ENST00000486148 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.05■□□□□ 0.96
TNXB-205ENST00000486148 SLC39A6Q13433 755 aa21.05■□□□□ 0.96
TNXB-205ENST00000486148 TMEM87AQ8NBN3 555 aa21.05■□□□□ 0.96
TNXB-205ENST00000486148 CCDC8Q9H0W5 538 aaPredicted RBP21.05■□□□□ 0.96
TNXB-205ENST00000486148 NOL7Q9UMY1 257 aaKnown RBP21.05■□□□□ 0.96
TNXB-205ENST00000486148 HDAC5Q9UQL6 1122 aa21.05■□□□□ 0.96
TNXB-205ENST00000486148 RGPD5Q99666 1765 aa21.05■□□□□ 0.96
TNXB-205ENST00000486148 IGKV5-2P06315 115 aa21.04■□□□□ 0.96
TNXB-205ENST00000486148 DDX54Q8TDD1 881 aaKnown RBP21.04■□□□□ 0.96
TNXB-205ENST00000486148 TLR7Q9NYK1 1049 aaKnown RBP21.04■□□□□ 0.96
TNXB-205ENST00000486148 SMC3Q9UQE7 1217 aa21.04■□□□□ 0.96
TNXB-205ENST00000486148 KCNB2Q92953 911 aa21.04■□□□□ 0.96
TNXB-205ENST00000486148 FAM227BQ96M60 508 aa21.04■□□□□ 0.96
TNXB-205ENST00000486148 PDRG1Q9NUG6 133 aa21.04■□□□□ 0.96
TNXB-205ENST00000486148 TRPM3Q9HCF6 1732 aaPredicted RBP21.04■□□□□ 0.96
TNXB-205ENST00000486148 DDX58O95786 925 aaKnown RBP21.03■□□□□ 0.96
TNXB-205ENST00000486148 NECTIN1Q15223 517 aa21.03■□□□□ 0.96
TNXB-205ENST00000486148 KRT28Q7Z3Y7 464 aa21.03■□□□□ 0.96
TNXB-205ENST00000486148 CCDC83Q8IWF9 413 aa21.03■□□□□ 0.96
TNXB-205ENST00000486148 ARID3AQ99856 593 aa21.03■□□□□ 0.96
TNXB-205ENST00000486148 ADAMTS7Q9UKP4 1686 aa21.03■□□□□ 0.96
TNXB-205ENST00000486148 ZSWIM6Q9HCJ5 1215 aa21.03■□□□□ 0.96
TNXB-205ENST00000486148 CCDC171Q6TFL3 1326 aa21.03■□□□□ 0.96
TNXB-205ENST00000486148 G3BP1Q13283 466 aaKnown RBP eCLIP21.02■□□□□ 0.96
TNXB-205ENST00000486148 VPS53Q5VIR6 699 aa21.02■□□□□ 0.96
TNXB-205ENST00000486148 SIL1Q9H173 461 aa21.02■□□□□ 0.96
TNXB-205ENST00000486148 ERBB3P21860 1342 aa21.02■□□□□ 0.96
TNXB-205ENST00000486148 F13A1P00488 732 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms