RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 A1BGP04217 495 aa26.08■■□□□ 1.77
CHRD-216ENST00000486066 CNBD1Q8NA66 436 aa26.08■■□□□ 1.77
CHRD-216ENST00000486066 NPC1L1Q9UHC9 1359 aa26.07■■□□□ 1.76
CHRD-216ENST00000486066 KLRG2A4D1S0 409 aaPredicted RBP26.06■■□□□ 1.76
CHRD-216ENST00000486066 TEFQ10587 303 aa26.06■■□□□ 1.76
CHRD-216ENST00000486066 GAS2L2Q8NHY3 880 aa26.06■■□□□ 1.76
CHRD-216ENST00000486066 MASTLQ96GX5 879 aa26.06■■□□□ 1.76
CHRD-216ENST00000486066 FMNL2Q96PY5 1086 aa26.06■■□□□ 1.76
CHRD-216ENST00000486066 SETDB2Q96T68 719 aa26.06■■□□□ 1.76
CHRD-216ENST00000486066 MKRN1Q9UHC7 482 aaKnown RBP26.06■■□□□ 1.76
CHRD-216ENST00000486066 SOGA3Q5TF21 947 aa26.05■■□□□ 1.76
CHRD-216ENST00000486066 KCNQ3O43525 872 aa26.04■■□□□ 1.76
CHRD-216ENST00000486066 TAF1DQ9H5J8 278 aaPredicted RBP26.04■■□□□ 1.76
CHRD-216ENST00000486066 SNED1Q8TER0 1413 aa26.04■■□□□ 1.76
CHRD-216ENST00000486066 FOXN1O15353 648 aa26.03■■□□□ 1.76
CHRD-216ENST00000486066 ITGBL1O95965 494 aaPredicted RBP26.03■■□□□ 1.76
CHRD-216ENST00000486066 LDHDQ86WU2 507 aa26.03■■□□□ 1.76
CHRD-216ENST00000486066 ST5P78524 1137 aa26.02■■□□□ 1.76
CHRD-216ENST00000486066 CLEC4GQ6UXB4 293 aa26.02■■□□□ 1.76
CHRD-216ENST00000486066 PCGF6Q9BYE7 350 aa26.02■■□□□ 1.76
CHRD-216ENST00000486066 ZNF330Q9Y3S2 320 aaPredicted RBP26.02■■□□□ 1.76
CHRD-216ENST00000486066 IQCA1LA6NCM1 817 aa26.01■■□□□ 1.75
CHRD-216ENST00000486066 CC2D1BQ5T0F9 858 aaKnown RBP26.01■■□□□ 1.75
CHRD-216ENST00000486066 DZIP3Q86Y13 1208 aaKnown RBP26.01■■□□□ 1.75
CHRD-216ENST00000486066 PRDM10Q9NQV6 1147 aa26■■□□□ 1.75
CHRD-216ENST00000486066 USP16Q9Y5T5 823 aa26■■□□□ 1.75
CHRD-216ENST00000486066 RGL2O15211 777 aa25.99■■□□□ 1.75
CHRD-216ENST00000486066 PHACTR3Q96KR7 559 aa25.99■■□□□ 1.75
CHRD-216ENST00000486066 ZNF541Q9H0D2 1346 aa25.98■■□□□ 1.75
CHRD-216ENST00000486066 CCDC93Q567U6 631 aa25.98■■□□□ 1.75
CHRD-216ENST00000486066 PRAMEF22A3QJZ6 481 aa25.97■■□□□ 1.75
CHRD-216ENST00000486066 FKBP4Q02790 459 aaKnown RBP eCLIP25.97■■□□□ 1.75
CHRD-216ENST00000486066 BTBD11A6QL63 1104 aa25.96■■□□□ 1.75
CHRD-216ENST00000486066 NPR1P16066 1061 aa25.96■■□□□ 1.75
CHRD-216ENST00000486066 PIP4K2AP48426 406 aaPredicted RBP25.96■■□□□ 1.75
CHRD-216ENST00000486066 VEGFBP49765 207 aa25.96■■□□□ 1.75
CHRD-216ENST00000486066 RSPH6AQ9H0K4 717 aa25.96■■□□□ 1.75
CHRD-216ENST00000486066 U2SURPO15042 1029 aaKnown RBP25.95■■□□□ 1.74
CHRD-216ENST00000486066 TMEM88BA6NKF7 163 aa25.94■■□□□ 1.74
CHRD-216ENST00000486066 OLFM4Q6UX06 510 aa25.94■■□□□ 1.74
CHRD-216ENST00000486066 NBPF5PQ86XG9 351 aaPredicted RBP25.94■■□□□ 1.74
CHRD-216ENST00000486066 WBP1LQ9NX94 342 aa25.94■■□□□ 1.74
CHRD-216ENST00000486066 THSD7BQ9C0I4 1608 aa25.93■■□□□ 1.74
CHRD-216ENST00000486066 NBPF26B4DH59 902 aa25.93■■□□□ 1.74
CHRD-216ENST00000486066 FZD9O00144 591 aa25.93■■□□□ 1.74
CHRD-216ENST00000486066 NBPF10Q6P3W6 841 aaKnown RBP25.93■■□□□ 1.74
CHRD-216ENST00000486066 NBPF15Q8N660 670 aa25.93■■□□□ 1.74
CHRD-216ENST00000486066 ZNF277Q9NRM2 450 aaPredicted RBP25.93■■□□□ 1.74
CHRD-216ENST00000486066 COL4A5P29400 1685 aa25.93■■□□□ 1.74
CHRD-216ENST00000486066 LAMB4A4D0S4 1761 aa25.92■■□□□ 1.74
CHRD-216ENST00000486066 LTBP1Q14766 1721 aa25.92■■□□□ 1.74
CHRD-216ENST00000486066 RASSF10A6NK89 507 aa25.91■■□□□ 1.74
CHRD-216ENST00000486066 NPM2Q86SE8 214 aaKnown RBP25.91■■□□□ 1.74
CHRD-216ENST00000486066 HACL1Q9UJ83 578 aa25.91■■□□□ 1.74
CHRD-216ENST00000486066 NPHP1O15259 732 aa25.9■■□□□ 1.74
CHRD-216ENST00000486066 SNRPA1P09661 255 aaKnown RBP25.9■■□□□ 1.74
CHRD-216ENST00000486066 PRKAR2BP31323 418 aa25.9■■□□□ 1.74
CHRD-216ENST00000486066 CTCFP49711 727 aaPredicted RBP25.9■■□□□ 1.74
CHRD-216ENST00000486066 ZNF652Q9Y2D9 606 aa25.9■■□□□ 1.74
CHRD-216ENST00000486066 EPHX2P34913 555 aa25.89■■□□□ 1.74
CHRD-216ENST00000486066 RTKN2Q8IZC4 609 aa25.89■■□□□ 1.74
CHRD-216ENST00000486066 TPTE2Q6XPS3 522 aa25.88■■□□□ 1.73
CHRD-216ENST00000486066 NUP98P52948 1817 aa25.88■■□□□ 1.73
CHRD-216ENST00000486066 CRY2Q49AN0 593 aa25.87■■□□□ 1.73
CHRD-216ENST00000486066 NIP7Q9Y221 180 aaKnown RBP eCLIP25.87■■□□□ 1.73
CHRD-216ENST00000486066 RNF123Q5XPI4 1314 aa25.87■■□□□ 1.73
CHRD-216ENST00000486066 IARSP41252 1262 aaKnown RBP25.86■■□□□ 1.73
CHRD-216ENST00000486066 EAPPQ56P03 285 aaPredicted RBP25.86■■□□□ 1.73
CHRD-216ENST00000486066 PNMA8AQ86V59 439 aaPredicted RBP25.86■■□□□ 1.73
CHRD-216ENST00000486066 PSMD1Q99460 953 aa25.86■■□□□ 1.73
CHRD-216ENST00000486066 ABCC12Q96J65 1359 aa25.85■■□□□ 1.73
CHRD-216ENST00000486066 HLFQ16534 295 aa25.85■■□□□ 1.73
CHRD-216ENST00000486066 GPC2Q8N158 579 aa25.85■■□□□ 1.73
CHRD-216ENST00000486066 RIC1Q4ADV7 1423 aa25.85■■□□□ 1.73
CHRD-216ENST00000486066 MCM10Q7L590 875 aa25.84■■□□□ 1.73
CHRD-216ENST00000486066 CNTROBQ8N137 903 aa25.84■■□□□ 1.73
CHRD-216ENST00000486066 SYNE4Q8N205 404 aa25.84■■□□□ 1.73
CHRD-216ENST00000486066 KDM3BQ7LBC6 1761 aa25.84■■□□□ 1.73
CHRD-216ENST00000486066 HSPA8P11142 646 aaKnown RBP25.83■■□□□ 1.73
CHRD-216ENST00000486066 ALDH1B1P30837 517 aa25.83■■□□□ 1.73
CHRD-216ENST00000486066 LBX1P52954 281 aa25.83■■□□□ 1.73
CHRD-216ENST00000486066 MAP1SQ66K74 1059 aaPredicted RBP25.83■■□□□ 1.73
CHRD-216ENST00000486066 AIDAQ96BJ3 306 aa25.82■■□□□ 1.72
CHRD-216ENST00000486066 DEFB115Q30KQ5 88 aa25.81■■□□□ 1.72
CHRD-216ENST00000486066 TRPM7Q96QT4 1865 aa25.81■■□□□ 1.72
CHRD-216ENST00000486066 DLG5Q8TDM6 1919 aa25.79■■□□□ 1.72
CHRD-216ENST00000486066 HTATSF1O43719 755 aaKnown RBP25.79■■□□□ 1.72
CHRD-216ENST00000486066 HOXA10P31260 410 aaPredicted RBP25.79■■□□□ 1.72
CHRD-216ENST00000486066 DCTN1Q14203 1278 aa25.79■■□□□ 1.72
CHRD-216ENST00000486066 CLEC11AQ9Y240 323 aa25.79■■□□□ 1.72
CHRD-216ENST00000486066 WDR33Q9C0J8 1336 aaKnown RBP25.79■■□□□ 1.72
CHRD-216ENST00000486066 IBTKQ9P2D0 1353 aaPredicted RBP25.79■■□□□ 1.72
CHRD-216ENST00000486066 SCNN1DP51172 638 aa25.78■■□□□ 1.72
CHRD-216ENST00000486066 DDX21Q9NR30 783 aaKnown RBP eCLIP25.78■■□□□ 1.72
CHRD-216ENST00000486066 CC2D2BQ6DHV5 1058 aa25.77■■□□□ 1.72
CHRD-216ENST00000486066 FAM177BA6PVY3 158 aa25.76■■□□□ 1.71
CHRD-216ENST00000486066 ERVV-1B6SEH8 477 aa25.76■■□□□ 1.71
CHRD-216ENST00000486066 SLC51AQ86UW1 340 aa25.76■■□□□ 1.71
CHRD-216ENST00000486066 RTF1Q92541 710 aaKnown RBP25.76■■□□□ 1.71
CHRD-216ENST00000486066 MAP2K1Q02750 393 aaPredicted RBP25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms