RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 SNRPA1P09661 255 aaKnown RBP27.67■■■□□ 2.02
LMBR1-217ENST00000485985 NPM2Q86SE8 214 aaKnown RBP27.67■■■□□ 2.02
LMBR1-217ENST00000485985 SETDB2Q96T68 719 aa27.67■■■□□ 2.02
LMBR1-217ENST00000485985 C21orf2O43822 256 aa27.66■■■□□ 2.02
LMBR1-217ENST00000485985 DDX10Q13206 875 aaKnown RBP27.66■■■□□ 2.02
LMBR1-217ENST00000485985 TAF7Q15545 349 aaPredicted RBP27.66■■■□□ 2.02
LMBR1-217ENST00000485985 NFE2L2Q16236 605 aa27.66■■■□□ 2.02
LMBR1-217ENST00000485985 MIS18AQ9NYP9 233 aa27.66■■■□□ 2.02
LMBR1-217ENST00000485985 ZNF219Q9P2Y4 722 aaPredicted RBP27.66■■■□□ 2.02
LMBR1-217ENST00000485985 ARFGEF2Q9Y6D5 1785 aa27.65■■■□□ 2.02
LMBR1-217ENST00000485985 NEFMP07197 916 aa27.65■■■□□ 2.02
LMBR1-217ENST00000485985 RALBP1Q15311 655 aa27.65■■■□□ 2.02
LMBR1-217ENST00000485985 FER1L6Q2WGJ9 1857 aa27.64■■■□□ 2.02
LMBR1-217ENST00000485985 DPY19L2Q6NUT2 758 aa27.64■■■□□ 2.02
LMBR1-217ENST00000485985 DZIP3Q86Y13 1208 aaKnown RBP27.64■■■□□ 2.02
LMBR1-217ENST00000485985 CNBD1Q8NA66 436 aa27.64■■■□□ 2.02
LMBR1-217ENST00000485985 THUMPD2Q9BTF0 503 aaKnown RBP27.64■■■□□ 2.02
LMBR1-217ENST00000485985 POTECB2RU33 542 aa27.63■■■□□ 2.01
LMBR1-217ENST00000485985 DICER1Q9UPY3 1922 aaKnown RBP27.63■■■□□ 2.01
LMBR1-217ENST00000485985 NBPF26B4DH59 902 aa27.62■■■□□ 2.01
LMBR1-217ENST00000485985 NBPF10Q6P3W6 841 aaKnown RBP27.62■■■□□ 2.01
LMBR1-217ENST00000485985 NBPF15Q8N660 670 aa27.62■■■□□ 2.01
LMBR1-217ENST00000485985 MAPK8IP3Q9UPT6 1336 aa27.62■■■□□ 2.01
LMBR1-217ENST00000485985 NUP98P52948 1817 aa27.62■■■□□ 2.01
LMBR1-217ENST00000485985 NPHP1O15259 732 aa27.61■■■□□ 2.01
LMBR1-217ENST00000485985 ERFEQ4G0M1 354 aa27.61■■■□□ 2.01
LMBR1-217ENST00000485985 CNKSR1Q969H4 720 aa27.61■■■□□ 2.01
LMBR1-217ENST00000485985 ST5P78524 1137 aa27.6■■■□□ 2.01
LMBR1-217ENST00000485985 STYK1Q6J9G0 422 aa27.6■■■□□ 2.01
LMBR1-217ENST00000485985 LTBP3Q9NS15 1303 aa27.6■■■□□ 2.01
LMBR1-217ENST00000485985 SRGNP10124 158 aa27.59■■■□□ 2.01
LMBR1-217ENST00000485985 SLX4Q8IY92 1834 aa27.59■■■□□ 2.01
LMBR1-217ENST00000485985 MYBBP1AQ9BQG0 1328 aaKnown RBP27.59■■■□□ 2.01
LMBR1-217ENST00000485985 TAOK3Q9H2K8 898 aa27.58■■■□□ 2.01
LMBR1-217ENST00000485985 PRPF40BQ6NWY9 871 aaKnown RBP27.57■■■□□ 2
LMBR1-217ENST00000485985 CLEC4GQ6UXB4 293 aa27.57■■■□□ 2
LMBR1-217ENST00000485985 MASTLQ96GX5 879 aa27.57■■■□□ 2
LMBR1-217ENST00000485985 PNNQ9H307 717 aaKnown RBP27.57■■■□□ 2
LMBR1-217ENST00000485985 COL13A1Q5TAT6 717 aaPredicted RBP27.56■■■□□ 2
LMBR1-217ENST00000485985 PNISRQ8TF01 805 aaKnown RBP27.56■■■□□ 2
LMBR1-217ENST00000485985 EIF4A1P60842 406 aaKnown RBP27.54■■■□□ 2
LMBR1-217ENST00000485985 SOGA3Q5TF21 947 aa27.54■■■□□ 2
LMBR1-217ENST00000485985 NBPF5PQ86XG9 351 aaPredicted RBP27.53■■■□□ 2
LMBR1-217ENST00000485985 ZNF652Q9Y2D9 606 aa27.53■■■□□ 2
LMBR1-217ENST00000485985 DDNO94850 711 aaPredicted RBP27.51■■□□□ 1.99
LMBR1-217ENST00000485985 C7orf43Q8WVR3 580 aa27.51■■□□□ 1.99
LMBR1-217ENST00000485985 RIPK4P57078 832 aa27.5■■□□□ 1.99
LMBR1-217ENST00000485985 TMPOP42166 694 aaKnown RBP27.49■■□□□ 1.99
LMBR1-217ENST00000485985 KLRG2A4D1S0 409 aaPredicted RBP27.48■■□□□ 1.99
LMBR1-217ENST00000485985 RGL2O15211 777 aa27.48■■□□□ 1.99
LMBR1-217ENST00000485985 NPR1P16066 1061 aa27.48■■□□□ 1.99
LMBR1-217ENST00000485985 HLFQ16534 295 aa27.48■■□□□ 1.99
LMBR1-217ENST00000485985 CHADLQ6NUI6 762 aa27.48■■□□□ 1.99
LMBR1-217ENST00000485985 TPTE2Q6XPS3 522 aa27.48■■□□□ 1.99
LMBR1-217ENST00000485985 CCDC146Q8IYE0 955 aa27.48■■□□□ 1.99
LMBR1-217ENST00000485985 NIP7Q9Y221 180 aaKnown RBP eCLIP27.48■■□□□ 1.99
LMBR1-217ENST00000485985 PCNTO95613 3336 aa27.47■■□□□ 1.99
LMBR1-217ENST00000485985 POTEIP0CG38 1075 aa27.46■■□□□ 1.99
LMBR1-217ENST00000485985 POTEJP0CG39 1038 aa27.46■■□□□ 1.99
LMBR1-217ENST00000485985 CCDC93Q567U6 631 aa27.46■■□□□ 1.99
LMBR1-217ENST00000485985 TSPYL4Q9UJ04 414 aa27.46■■□□□ 1.99
LMBR1-217ENST00000485985 RRP7AQ9Y3A4 280 aaKnown RBP27.46■■□□□ 1.99
LMBR1-217ENST00000485985 ANKRD36CQ5JPF3 1778 aa27.45■■□□□ 1.99
LMBR1-217ENST00000485985 NGEFQ8N5V2 710 aa27.45■■□□□ 1.98
LMBR1-217ENST00000485985 HSPA1AP0DMV8 641 aaKnown RBP27.44■■□□□ 1.98
LMBR1-217ENST00000485985 HSPA1BP0DMV9 641 aaKnown RBP27.44■■□□□ 1.98
LMBR1-217ENST00000485985 MYL6BP14649 208 aa27.43■■□□□ 1.98
LMBR1-217ENST00000485985 TTLL7Q6ZT98 887 aa27.43■■□□□ 1.98
LMBR1-217ENST00000485985 MAP3K15Q6ZN16 1313 aa27.42■■□□□ 1.98
LMBR1-217ENST00000485985 FAM177BA6PVY3 158 aa27.42■■□□□ 1.98
LMBR1-217ENST00000485985 FKBP4Q02790 459 aaKnown RBP eCLIP27.42■■□□□ 1.98
LMBR1-217ENST00000485985 TNS4Q8IZW8 715 aa27.42■■□□□ 1.98
LMBR1-217ENST00000485985 L3MBTL3Q96JM7 780 aaPredicted RBP27.42■■□□□ 1.98
LMBR1-217ENST00000485985 PRKRIP1Q9H875 184 aaPredicted RBP27.42■■□□□ 1.98
LMBR1-217ENST00000485985 CREBZFQ9NS37 354 aa27.42■■□□□ 1.98
LMBR1-217ENST00000485985 IQCA1LA6NCM1 817 aa27.41■■□□□ 1.98
LMBR1-217ENST00000485985 LMOD3Q0VAK6 560 aa27.41■■□□□ 1.98
LMBR1-217ENST00000485985 SCN4AP35499 1836 aa27.41■■□□□ 1.98
LMBR1-217ENST00000485985 ABCC12Q96J65 1359 aa27.4■■□□□ 1.98
LMBR1-217ENST00000485985 WDR43Q15061 677 aaKnown RBP eCLIP27.4■■□□□ 1.98
LMBR1-217ENST00000485985 OLFM4Q6UX06 510 aa27.4■■□□□ 1.98
LMBR1-217ENST00000485985 ZNF277Q9NRM2 450 aaPredicted RBP27.4■■□□□ 1.98
LMBR1-217ENST00000485985 ERBB4Q15303 1308 aa27.4■■□□□ 1.98
LMBR1-217ENST00000485985 ERVV-1B6SEH8 477 aa27.39■■□□□ 1.98
LMBR1-217ENST00000485985 NEUROD2Q15784 382 aa27.39■■□□□ 1.98
LMBR1-217ENST00000485985 RTKN2Q8IZC4 609 aa27.39■■□□□ 1.98
LMBR1-217ENST00000485985 RUNDC1Q96C34 613 aa27.39■■□□□ 1.98
LMBR1-217ENST00000485985 ADAMTS8Q9UP79 889 aa27.39■■□□□ 1.98
LMBR1-217ENST00000485985 GTF2E1P29083 439 aaPredicted RBP27.38■■□□□ 1.97
LMBR1-217ENST00000485985 ALDH1B1P30837 517 aa27.38■■□□□ 1.97
LMBR1-217ENST00000485985 KIF6Q6ZMV9 814 aa27.38■■□□□ 1.97
LMBR1-217ENST00000485985 LRP10Q7Z4F1 713 aa27.38■■□□□ 1.97
LMBR1-217ENST00000485985 ZBTB3Q9H5J0 574 aa27.38■■□□□ 1.97
LMBR1-217ENST00000485985 TAF1DQ9H5J8 278 aaPredicted RBP27.38■■□□□ 1.97
LMBR1-217ENST00000485985 BABAM1Q9NWV8 329 aa27.38■■□□□ 1.97
LMBR1-217ENST00000485985 TRIM35Q9UPQ4 493 aa27.38■■□□□ 1.97
LMBR1-217ENST00000485985 UBN2Q6ZU65 1347 aa27.38■■□□□ 1.97
LMBR1-217ENST00000485985 LDHDQ86WU2 507 aa27.37■■□□□ 1.97
LMBR1-217ENST00000485985 MKRN1Q9UHC7 482 aaKnown RBP27.37■■□□□ 1.97
LMBR1-217ENST00000485985 PDIA6Q15084 440 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms