RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 TBC1D9BQ66K14 1250 aa15.27■□□□□ 0.04
HPS4-214ENST00000485842 LRP10Q7Z4F1 713 aa15.27■□□□□ 0.04
HPS4-214ENST00000485842 XAGE3Q8WTP9 111 aa15.27■□□□□ 0.04
HPS4-214ENST00000485842 FHDC1Q9C0D6 1143 aaPredicted RBP15.27■□□□□ 0.04
HPS4-214ENST00000485842 ZBTB3Q9H5J0 574 aa15.27■□□□□ 0.04
HPS4-214ENST00000485842 ZNF652Q9Y2D9 606 aa15.27■□□□□ 0.04
HPS4-214ENST00000485842 PARP3Q9Y6F1 533 aa15.27■□□□□ 0.04
HPS4-214ENST00000485842 MAP3K15Q6ZN16 1313 aa15.26■□□□□ 0.03
HPS4-214ENST00000485842 SLFN5Q08AF3 891 aa15.26■□□□□ 0.03
HPS4-214ENST00000485842 COPS6Q7L5N1 327 aa15.26■□□□□ 0.03
HPS4-214ENST00000485842 NUP98P52948 1817 aa15.26■□□□□ 0.03
HPS4-214ENST00000485842 AFDNP55196 1824 aaKnown RBP15.25■□□□□ 0.03
HPS4-214ENST00000485842 HLFQ16534 295 aa15.25■□□□□ 0.03
HPS4-214ENST00000485842 STK31Q9BXU1 1019 aa15.25■□□□□ 0.03
HPS4-214ENST00000485842 CHMP4AQ9BY43 222 aa15.25■□□□□ 0.03
HPS4-214ENST00000485842 HYPKQ9NX55 129 aa15.25■□□□□ 0.03
HPS4-214ENST00000485842 POLRMTO00411 1230 aaKnown RBP15.24■□□□□ 0.03
HPS4-214ENST00000485842 TM4SF1P30408 202 aa15.24■□□□□ 0.03
HPS4-214ENST00000485842 CARMIL3Q8ND23 1372 aa15.24■□□□□ 0.03
HPS4-214ENST00000485842 ERVV-1B6SEH8 477 aa15.23■□□□□ 0.03
HPS4-214ENST00000485842 VAMP4O75379 141 aa15.23■□□□□ 0.03
HPS4-214ENST00000485842 CLEC4GQ6UXB4 293 aa15.23■□□□□ 0.03
HPS4-214ENST00000485842 PHAXQ9H814 394 aaKnown RBP15.23■□□□□ 0.03
HPS4-214ENST00000485842 C10orf71Q711Q0 1435 aa15.23■□□□□ 0.03
HPS4-214ENST00000485842 NRXN2Q9P2S2 1712 aa15.23■□□□□ 0.03
HPS4-214ENST00000485842 ANKRD36CQ5JPF3 1778 aa15.22■□□□□ 0.03
HPS4-214ENST00000485842 ARFGEF2Q9Y6D5 1785 aa15.22■□□□□ 0.03
HPS4-214ENST00000485842 SERPINB2P05120 415 aa15.22■□□□□ 0.03
HPS4-214ENST00000485842 SETDB2Q96T68 719 aa15.22■□□□□ 0.03
HPS4-214ENST00000485842 SYT17Q9BSW7 474 aa15.22■□□□□ 0.03
HPS4-214ENST00000485842 NIP7Q9Y221 180 aaKnown RBP eCLIP15.22■□□□□ 0.03
HPS4-214ENST00000485842 ZBED9Q6R2W3 1325 aa15.21■□□□□ 0.03
HPS4-214ENST00000485842 ATP10DQ9P241 1426 aa15.21■□□□□ 0.03
HPS4-214ENST00000485842 FAM177BA6PVY3 158 aa15.21■□□□□ 0.03
HPS4-214ENST00000485842 NPHP1O15259 732 aa15.21■□□□□ 0.03
HPS4-214ENST00000485842 GPTP24298 496 aa15.21■□□□□ 0.03
HPS4-214ENST00000485842 GIGYF2Q6Y7W6 1299 aaKnown RBP15.21■□□□□ 0.03
HPS4-214ENST00000485842 NLGN2Q8NFZ4 835 aa15.21■□□□□ 0.03
HPS4-214ENST00000485842 KIF13BQ9NQT8 1826 aa15.21■□□□□ 0.03
HPS4-214ENST00000485842 RGL2O15211 777 aa15.2■□□□□ 0.02
HPS4-214ENST00000485842 SLC4A2P04920 1241 aa15.2■□□□□ 0.02
HPS4-214ENST00000485842 CD2APQ9Y5K6 639 aa15.2■□□□□ 0.02
HPS4-214ENST00000485842 SRCAPQ6ZRS2 3230 aa15.2■□□□□ 0.02
HPS4-214ENST00000485842 CACNA1FO60840 1977 aa15.19■□□□□ 0.02
HPS4-214ENST00000485842 ANKRD13DQ6ZTN6 518 aa15.19■□□□□ 0.02
HPS4-214ENST00000485842 G2E3Q7L622 706 aa15.19■□□□□ 0.02
HPS4-214ENST00000485842 NBPF5PQ86XG9 351 aaPredicted RBP15.19■□□□□ 0.02
HPS4-214ENST00000485842 TRMT2AQ8IZ69 625 aaKnown RBP15.19■□□□□ 0.02
HPS4-214ENST00000485842 CCDC24Q8N4L8 307 aa15.19■□□□□ 0.02
HPS4-214ENST00000485842 CNBD1Q8NA66 436 aa15.19■□□□□ 0.02
HPS4-214ENST00000485842 PLBD2Q8NHP8 589 aa15.19■□□□□ 0.02
HPS4-214ENST00000485842 N4BP2Q86UW6 1770 aaPredicted RBP15.19■□□□□ 0.02
HPS4-214ENST00000485842 PRR5LQ6MZQ0 368 aa15.18■□□□□ 0.02
HPS4-214ENST00000485842 RIC3Q7Z5B4 369 aa15.18■□□□□ 0.02
HPS4-214ENST00000485842 UBN2Q6ZU65 1347 aa15.17■□□□□ 0.02
HPS4-214ENST00000485842 KIAA1551Q9HCM1 1747 aa15.17■□□□□ 0.02
HPS4-214ENST00000485842 ANKRD31Q8N7Z5 1873 aa15.17■□□□□ 0.02
HPS4-214ENST00000485842 PXDNLA1KZ92 1463 aa15.17■□□□□ 0.02
HPS4-214ENST00000485842 DDX58O95786 925 aaKnown RBP15.17■□□□□ 0.02
HPS4-214ENST00000485842 FLIIQ13045 1269 aa15.17■□□□□ 0.02
HPS4-214ENST00000485842 HSP90AB3PQ58FF7 597 aa15.17■□□□□ 0.02
HPS4-214ENST00000485842 ZNF34Q8IZ26 560 aa15.17■□□□□ 0.02
HPS4-214ENST00000485842 WWC3Q9ULE0 1092 aa15.17■□□□□ 0.02
HPS4-214ENST00000485842 ST5P78524 1137 aa15.16■□□□□ 0.02
HPS4-214ENST00000485842 TCIRG1Q13488 830 aa15.16■□□□□ 0.02
HPS4-214ENST00000485842 PELP1Q8IZL8 1130 aaKnown RBP15.16■□□□□ 0.02
HPS4-214ENST00000485842 ZNF428Q96B54 188 aa15.16■□□□□ 0.02
HPS4-214ENST00000485842 ADCY9O60503 1353 aa15.15■□□□□ 0.02
HPS4-214ENST00000485842 ATP5J2-PTCD1G3V325 749 aa15.15■□□□□ 0.02
HPS4-214ENST00000485842 GTF2E1P29083 439 aaPredicted RBP15.15■□□□□ 0.02
HPS4-214ENST00000485842 FKBP5Q13451 457 aaPredicted RBP15.15■□□□□ 0.02
HPS4-214ENST00000485842 PARP10Q53GL7 1025 aa15.15■□□□□ 0.02
HPS4-214ENST00000485842 MYD88Q99836 296 aa15.15■□□□□ 0.02
HPS4-214ENST00000485842 BCL2L13Q9BXK5 485 aa15.15■□□□□ 0.02
HPS4-214ENST00000485842 MAP3K2Q9Y2U5 619 aa15.15■□□□□ 0.02
HPS4-214ENST00000485842 A0A0G2JLW4 131 aa15.14■□□□□ 0.01
HPS4-214ENST00000485842 PI4KAP2A4QPH2 592 aa15.14■□□□□ 0.01
HPS4-214ENST00000485842 CHRNA5P30532 468 aa15.14■□□□□ 0.01
HPS4-214ENST00000485842 SUSD4Q5VX71 490 aa15.14■□□□□ 0.01
HPS4-214ENST00000485842 KSR2Q6VAB6 950 aa15.14■□□□□ 0.01
HPS4-214ENST00000485842 TPTE2Q6XPS3 522 aa15.14■□□□□ 0.01
HPS4-214ENST00000485842 NLRP10Q86W26 655 aa15.14■□□□□ 0.01
HPS4-214ENST00000485842 NUTM1Q86Y26 1132 aa15.14■□□□□ 0.01
HPS4-214ENST00000485842 PI4KAP1Q8N8J0 262 aa15.14■□□□□ 0.01
HPS4-214ENST00000485842 SSH1Q8WYL5 1049 aa15.14■□□□□ 0.01
HPS4-214ENST00000485842 YTHDC1Q96MU7 727 aaKnown RBP15.14■□□□□ 0.01
HPS4-214ENST00000485842 NYXQ9GZU5 481 aa15.14■□□□□ 0.01
HPS4-214ENST00000485842 ABCC12Q96J65 1359 aa15.13■□□□□ 0.01
HPS4-214ENST00000485842 IBTKQ9P2D0 1353 aaPredicted RBP15.13■□□□□ 0.01
HPS4-214ENST00000485842 TNRC6CQ9HCJ0 1690 aaKnown RBP15.13■□□□□ 0.01
HPS4-214ENST00000485842 NTSR2O95665 410 aa15.13■□□□□ 0.01
HPS4-214ENST00000485842 CT47B1P0C2W7 299 aaPredicted RBP15.13■□□□□ 0.01
HPS4-214ENST00000485842 COL11A2P13942 1736 aaPredicted RBP15.13■□□□□ 0.01
HPS4-214ENST00000485842 DPEP1P16444 411 aa15.13■□□□□ 0.01
HPS4-214ENST00000485842 TGFB2P61812 414 aa15.13■□□□□ 0.01
HPS4-214ENST00000485842 PPP1R42Q7Z4L9 355 aa15.13■□□□□ 0.01
HPS4-214ENST00000485842 SMC4Q9NTJ3 1288 aa15.13■□□□□ 0.01
HPS4-214ENST00000485842 DLEC1Q9Y238 1755 aa15.12■□□□□ 0.01
HPS4-214ENST00000485842 ERFEQ4G0M1 354 aa15.12■□□□□ 0.01
HPS4-214ENST00000485842 C2CD5Q86YS7 1000 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms