RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 HMGB2P26583 209 aaKnown RBP15.31■□□□□ 0.04
APTX-227ENST00000485479 SGIP1Q9BQI5 828 aa15.31■□□□□ 0.04
APTX-227ENST00000485479 PPP1R1BQ9UD71 204 aaPredicted RBP15.31■□□□□ 0.04
APTX-227ENST00000485479 TBC1D9BQ66K14 1250 aa15.3■□□□□ 0.04
APTX-227ENST00000485479 G2E3Q7L622 706 aa15.3■□□□□ 0.04
APTX-227ENST00000485479 TRMT2AQ8IZ69 625 aaKnown RBP15.3■□□□□ 0.04
APTX-227ENST00000485479 DBF4Q9UBU7 674 aaPredicted RBP15.3■□□□□ 0.04
APTX-227ENST00000485479 FAM177BA6PVY3 158 aa15.29■□□□□ 0.04
APTX-227ENST00000485479 CCDC30Q5VVM6 783 aa15.29■□□□□ 0.04
APTX-227ENST00000485479 CCDC24Q8N4L8 307 aa15.29■□□□□ 0.04
APTX-227ENST00000485479 SLC16A10Q8TF71 515 aa15.29■□□□□ 0.04
APTX-227ENST00000485479 SLC4A2P04920 1241 aa15.29■□□□□ 0.04
APTX-227ENST00000485479 DDR1Q08345 913 aa15.29■□□□□ 0.04
APTX-227ENST00000485479 ERBB4Q15303 1308 aa15.28■□□□□ 0.04
APTX-227ENST00000485479 A0A087WZG4 1122 aa15.28■□□□□ 0.04
APTX-227ENST00000485479 NFIXQ14938 502 aa15.28■□□□□ 0.04
APTX-227ENST00000485479 NUP98P52948 1817 aa15.28■□□□□ 0.04
APTX-227ENST00000485479 GPTP24298 496 aa15.27■□□□□ 0.04
APTX-227ENST00000485479 KIF6Q6ZMV9 814 aa15.27■□□□□ 0.04
APTX-227ENST00000485479 STK31Q9BXU1 1019 aa15.27■□□□□ 0.04
APTX-227ENST00000485479 WWC3Q9ULE0 1092 aa15.27■□□□□ 0.04
APTX-227ENST00000485479 MAP3K15Q6ZN16 1313 aa15.27■□□□□ 0.03
APTX-227ENST00000485479 COL24A1Q17RW2 1714 aa15.26■□□□□ 0.03
APTX-227ENST00000485479 LRP5O75197 1615 aa15.26■□□□□ 0.03
APTX-227ENST00000485479 POLD1P28340 1107 aa15.26■□□□□ 0.03
APTX-227ENST00000485479 NLGN1Q8N2Q7 840 aa15.25■□□□□ 0.03
APTX-227ENST00000485479 HYPKQ9NX55 129 aa15.25■□□□□ 0.03
APTX-227ENST00000485479 POLRMTO00411 1230 aaKnown RBP15.25■□□□□ 0.03
APTX-227ENST00000485479 SSH1Q8WYL5 1049 aa15.25■□□□□ 0.03
APTX-227ENST00000485479 NIP7Q9Y221 180 aaKnown RBP eCLIP15.25■□□□□ 0.03
APTX-227ENST00000485479 ARFGEF2Q9Y6D5 1785 aa15.25■□□□□ 0.03
APTX-227ENST00000485479 AFDNP55196 1824 aaKnown RBP15.24■□□□□ 0.03
APTX-227ENST00000485479 FHDC1Q9C0D6 1143 aaPredicted RBP15.24■□□□□ 0.03
APTX-227ENST00000485479 UBN2Q6ZU65 1347 aa15.24■□□□□ 0.03
APTX-227ENST00000485479 ATP5J2-PTCD1G3V325 749 aa15.24■□□□□ 0.03
APTX-227ENST00000485479 TM4SF1P30408 202 aa15.24■□□□□ 0.03
APTX-227ENST00000485479 FLIIQ13045 1269 aa15.24■□□□□ 0.03
APTX-227ENST00000485479 CARMIL3Q8ND23 1372 aa15.23■□□□□ 0.03
APTX-227ENST00000485479 F6X3S4 739 aa15.23■□□□□ 0.03
APTX-227ENST00000485479 ANKRD13DQ6ZTN6 518 aa15.23■□□□□ 0.03
APTX-227ENST00000485479 PARP3Q9Y6F1 533 aa15.23■□□□□ 0.03
APTX-227ENST00000485479 ADCY9O60503 1353 aa15.22■□□□□ 0.03
APTX-227ENST00000485479 FKBP5Q13451 457 aaPredicted RBP15.22■□□□□ 0.03
APTX-227ENST00000485479 GIGYF2Q6Y7W6 1299 aaKnown RBP15.22■□□□□ 0.03
APTX-227ENST00000485479 RIC3Q7Z5B4 369 aa15.22■□□□□ 0.03
APTX-227ENST00000485479 NLGN2Q8NFZ4 835 aa15.22■□□□□ 0.03
APTX-227ENST00000485479 SMC4Q9NTJ3 1288 aa15.22■□□□□ 0.03
APTX-227ENST00000485479 PI4KAP2A4QPH2 592 aa15.22■□□□□ 0.03
APTX-227ENST00000485479 SERPINB2P05120 415 aa15.22■□□□□ 0.03
APTX-227ENST00000485479 NUTM1Q86Y26 1132 aa15.22■□□□□ 0.03
APTX-227ENST00000485479 PI4KAP1Q8N8J0 262 aa15.22■□□□□ 0.03
APTX-227ENST00000485479 SETDB2Q96T68 719 aa15.22■□□□□ 0.03
APTX-227ENST00000485479 ZNF652Q9Y2D9 606 aa15.22■□□□□ 0.03
APTX-227ENST00000485479 MAP3K2Q9Y2U5 619 aa15.22■□□□□ 0.03
APTX-227ENST00000485479 ERVV-1B6SEH8 477 aa15.21■□□□□ 0.03
APTX-227ENST00000485479 RTL5Q5HYW3 569 aaPredicted RBP15.21■□□□□ 0.03
APTX-227ENST00000485479 PLBD2Q8NHP8 589 aa15.21■□□□□ 0.03
APTX-227ENST00000485479 ANKRD36CQ5JPF3 1778 aa15.21■□□□□ 0.02
APTX-227ENST00000485479 NPHP1O15259 732 aa15.2■□□□□ 0.02
APTX-227ENST00000485479 BCAR3O75815 825 aa15.2■□□□□ 0.02
APTX-227ENST00000485479 MRPL50Q8N5N7 158 aaKnown RBP15.2■□□□□ 0.02
APTX-227ENST00000485479 MYD88Q99836 296 aa15.2■□□□□ 0.02
APTX-227ENST00000485479 SUSD4Q5VX71 490 aa15.2■□□□□ 0.02
APTX-227ENST00000485479 CLEC4GQ6UXB4 293 aa15.2■□□□□ 0.02
APTX-227ENST00000485479 SYNE4Q8N205 404 aa15.2■□□□□ 0.02
APTX-227ENST00000485479 JARID2Q92833 1246 aaPredicted RBP15.2■□□□□ 0.02
APTX-227ENST00000485479 RARSP54136 660 aaKnown RBP15.19■□□□□ 0.02
APTX-227ENST00000485479 NBPF5PQ86XG9 351 aaPredicted RBP15.19■□□□□ 0.02
APTX-227ENST00000485479 N4BP2Q86UW6 1770 aaPredicted RBP15.19■□□□□ 0.02
APTX-227ENST00000485479 ATP10DQ9P241 1426 aa15.19■□□□□ 0.02
APTX-227ENST00000485479 CWF19L2Q2TBE0 894 aaKnown RBP15.18■□□□□ 0.02
APTX-227ENST00000485479 PRR5LQ6MZQ0 368 aa15.18■□□□□ 0.02
APTX-227ENST00000485479 SYT17Q9BSW7 474 aa15.18■□□□□ 0.02
APTX-227ENST00000485479 NRXN2Q9P2S2 1712 aa15.18■□□□□ 0.02
APTX-227ENST00000485479 CACNA1FO60840 1977 aa15.18■□□□□ 0.02
APTX-227ENST00000485479 TCIRG1Q13488 830 aa15.18■□□□□ 0.02
APTX-227ENST00000485479 ZNF34Q8IZ26 560 aa15.18■□□□□ 0.02
APTX-227ENST00000485479 CNBD1Q8NA66 436 aa15.18■□□□□ 0.02
APTX-227ENST00000485479 TNNQ9UQP3 1299 aa15.18■□□□□ 0.02
APTX-227ENST00000485479 SLC4A10Q6U841 1118 aa15.17■□□□□ 0.02
APTX-227ENST00000485479 KSR2Q6VAB6 950 aa15.17■□□□□ 0.02
APTX-227ENST00000485479 ABCC12Q96J65 1359 aa15.17■□□□□ 0.02
APTX-227ENST00000485479 ANKRD31Q8N7Z5 1873 aa15.17■□□□□ 0.02
APTX-227ENST00000485479 DDX58O95786 925 aaKnown RBP15.16■□□□□ 0.02
APTX-227ENST00000485479 CHRNA5P30532 468 aa15.16■□□□□ 0.02
APTX-227ENST00000485479 NLRP10Q86W26 655 aa15.16■□□□□ 0.02
APTX-227ENST00000485479 NOB1Q9ULX3 412 aaKnown RBP15.16■□□□□ 0.02
APTX-227ENST00000485479 C10orf71Q711Q0 1435 aa15.16■□□□□ 0.02
APTX-227ENST00000485479 TNRC6CQ9HCJ0 1690 aaKnown RBP15.16■□□□□ 0.02
APTX-227ENST00000485479 IGKV5-2P06315 115 aa15.16■□□□□ 0.02
APTX-227ENST00000485479 ERFEQ4G0M1 354 aa15.16■□□□□ 0.02
APTX-227ENST00000485479 FRAT1Q92837 279 aaPredicted RBP15.16■□□□□ 0.02
APTX-227ENST00000485479 CHMP4AQ9BY43 222 aa15.16■□□□□ 0.02
APTX-227ENST00000485479 A0A0G2JLW4 131 aa15.15■□□□□ 0.02
APTX-227ENST00000485479 NTSR2O95665 410 aa15.15■□□□□ 0.02
APTX-227ENST00000485479 GTF2E1P29083 439 aaPredicted RBP15.15■□□□□ 0.02
APTX-227ENST00000485479 METTL22Q9BUU2 404 aaPredicted RBP15.15■□□□□ 0.02
APTX-227ENST00000485479 ALDH1L2Q3SY69 923 aa15.15■□□□□ 0.02
APTX-227ENST00000485479 DNAAF4Q8WXU2 420 aa15.15■□□□□ 0.02
APTX-227ENST00000485479 FAM89AQ96GI7 184 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms