RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 RETREG3Q86VR2 466 aa7.9□□□□□ -1.14
NHLRC3-205ENST00000485407 ANKMY2Q8IV38 441 aa7.9□□□□□ -1.14
NHLRC3-205ENST00000485407 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.9□□□□□ -1.14
NHLRC3-205ENST00000485407 SLIT1O75093 1534 aa7.89□□□□□ -1.15
NHLRC3-205ENST00000485407 TRPM2O94759 1503 aa7.89□□□□□ -1.15
NHLRC3-205ENST00000485407 ARHGAP23Q9P227 1491 aa7.89□□□□□ -1.15
NHLRC3-205ENST00000485407 TMEM2Q9UHN6 1383 aa7.89□□□□□ -1.15
NHLRC3-205ENST00000485407 AFF2P51816 1311 aa7.89□□□□□ -1.15
NHLRC3-205ENST00000485407 SENP3-EIF4A1A0A087X0R7 540 aa7.89□□□□□ -1.15
NHLRC3-205ENST00000485407 ABL1P00519 1130 aa7.89□□□□□ -1.15
NHLRC3-205ENST00000485407 SCNN1AP37088 669 aa7.89□□□□□ -1.15
NHLRC3-205ENST00000485407 NPAS4Q8IUM7 802 aa7.89□□□□□ -1.15
NHLRC3-205ENST00000485407 FKBPLQ9UIM3 349 aa7.89□□□□□ -1.15
NHLRC3-205ENST00000485407 EID1Q9Y6B2 187 aa7.89□□□□□ -1.15
NHLRC3-205ENST00000485407 COL16A1Q07092 1604 aaPredicted RBP7.89□□□□□ -1.15
NHLRC3-205ENST00000485407 TMEM94Q12767 1356 aa7.88□□□□□ -1.15
NHLRC3-205ENST00000485407 DESI1Q6ICB0 168 aa7.88□□□□□ -1.15
NHLRC3-205ENST00000485407 LYPD8Q6UX82 237 aa7.88□□□□□ -1.15
NHLRC3-205ENST00000485407 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.88□□□□□ -1.15
NHLRC3-205ENST00000485407 SREK1Q8WXA9 508 aaKnown RBP7.88□□□□□ -1.15
NHLRC3-205ENST00000485407 PRKD2Q9BZL6 878 aa7.88□□□□□ -1.15
NHLRC3-205ENST00000485407 ADGRB3O60242 1522 aa7.88□□□□□ -1.15
NHLRC3-205ENST00000485407 DPYDQ12882 1025 aa7.87□□□□□ -1.15
NHLRC3-205ENST00000485407 RNF135Q8IUD6 432 aa7.87□□□□□ -1.15
NHLRC3-205ENST00000485407 C8orf37Q96NL8 207 aa7.87□□□□□ -1.15
NHLRC3-205ENST00000485407 QTRT2Q9H974 415 aaKnown RBP7.87□□□□□ -1.15
NHLRC3-205ENST00000485407 PPP1R1BQ9UD71 204 aaPredicted RBP7.87□□□□□ -1.15
NHLRC3-205ENST00000485407 TMEM131LA2VDJ0 1609 aa7.87□□□□□ -1.15
NHLRC3-205ENST00000485407 KIF1BO60333 1816 aa7.87□□□□□ -1.15
NHLRC3-205ENST00000485407 NHSL1Q5SYE7 1610 aa7.86□□□□□ -1.15
NHLRC3-205ENST00000485407 RPGRIP1LQ68CZ1 1315 aa7.86□□□□□ -1.15
NHLRC3-205ENST00000485407 GGCXP38435 758 aa7.86□□□□□ -1.15
NHLRC3-205ENST00000485407 SWI5Q1ZZU3 235 aa7.86□□□□□ -1.15
NHLRC3-205ENST00000485407 NGLY1Q96IV0 654 aa7.86□□□□□ -1.15
NHLRC3-205ENST00000485407 ZNF594Q96JF6 807 aaPredicted RBP7.86□□□□□ -1.15
NHLRC3-205ENST00000485407 BCL11AQ9H165 835 aa7.86□□□□□ -1.15
NHLRC3-205ENST00000485407 CEP126Q9P2H0 1117 aa7.86□□□□□ -1.15
NHLRC3-205ENST00000485407 SCAF11Q99590 1463 aaKnown RBP7.86□□□□□ -1.15
NHLRC3-205ENST00000485407 CCDC144AA2RUR9 1427 aa7.86□□□□□ -1.15
NHLRC3-205ENST00000485407 H3BRB1 525 aa7.85□□□□□ -1.15
NHLRC3-205ENST00000485407 TLL1O43897 1013 aa7.85□□□□□ -1.15
NHLRC3-205ENST00000485407 LZTS3O60299 673 aaPredicted RBP7.85□□□□□ -1.15
NHLRC3-205ENST00000485407 PRMT3O60678 531 aa7.85□□□□□ -1.15
NHLRC3-205ENST00000485407 LTKP29376 864 aa7.85□□□□□ -1.15
NHLRC3-205ENST00000485407 ZC3H6P61129 1189 aaKnown RBP7.85□□□□□ -1.15
NHLRC3-205ENST00000485407 KCNH2Q12809 1159 aa7.85□□□□□ -1.15
NHLRC3-205ENST00000485407 EML3Q32P44 896 aa7.85□□□□□ -1.15
NHLRC3-205ENST00000485407 Q3C1V9 767 aa7.85□□□□□ -1.15
NHLRC3-205ENST00000485407 OGFOD1Q8N543 542 aa7.85□□□□□ -1.15
NHLRC3-205ENST00000485407 PLPP7Q8NBV4 271 aa7.85□□□□□ -1.15
NHLRC3-205ENST00000485407 TUT1Q9H6E5 874 aaKnown RBP7.85□□□□□ -1.15
NHLRC3-205ENST00000485407 V9GY48 417 aaPredicted RBP7.85□□□□□ -1.15
NHLRC3-205ENST00000485407 SHPRHQ149N8 1683 aa7.85□□□□□ -1.15
NHLRC3-205ENST00000485407 ZFYVE9O95405 1425 aa7.85□□□□□ -1.15
NHLRC3-205ENST00000485407 MYO5BQ9ULV0 1848 aa7.85□□□□□ -1.15
NHLRC3-205ENST00000485407 ANKRD30BQ9BXX2 1392 aa7.84□□□□□ -1.15
NHLRC3-205ENST00000485407 NWD1Q149M9 1564 aa7.84□□□□□ -1.15
NHLRC3-205ENST00000485407 VAMP1P23763 118 aa7.84□□□□□ -1.15
NHLRC3-205ENST00000485407 MAPK1P28482 360 aa7.84□□□□□ -1.15
NHLRC3-205ENST00000485407 GLYCTKQ8IVS8 523 aa7.84□□□□□ -1.15
NHLRC3-205ENST00000485407 ZNF592Q92610 1267 aa7.84□□□□□ -1.15
NHLRC3-205ENST00000485407 ANO2Q9NQ90 1003 aa7.84□□□□□ -1.15
NHLRC3-205ENST00000485407 PCDHB9Q9Y5E1 797 aa7.84□□□□□ -1.15
NHLRC3-205ENST00000485407 CLTCL1P53675 1640 aa7.84□□□□□ -1.15
NHLRC3-205ENST00000485407 CEP350Q5VT06 3117 aa7.84□□□□□ -1.15
NHLRC3-205ENST00000485407 ZNF211Q13398 564 aaPredicted RBP7.83□□□□□ -1.16
NHLRC3-205ENST00000485407 TRIM50Q86XT4 487 aa7.83□□□□□ -1.16
NHLRC3-205ENST00000485407 C1orf216Q8TAB5 229 aa7.83□□□□□ -1.16
NHLRC3-205ENST00000485407 DNAAF2Q9NVR5 837 aaKnown RBP7.83□□□□□ -1.16
NHLRC3-205ENST00000485407 RIMS2Q9UQ26 1411 aa7.83□□□□□ -1.16
NHLRC3-205ENST00000485407 PLEKHG1Q9ULL1 1385 aa7.83□□□□□ -1.16
NHLRC3-205ENST00000485407 ZC3H4Q9UPT8 1303 aaKnown RBP7.82□□□□□ -1.16
NHLRC3-205ENST00000485407 NR1I2O75469 434 aa7.82□□□□□ -1.16
NHLRC3-205ENST00000485407 ATP1A2P50993 1020 aa7.82□□□□□ -1.16
NHLRC3-205ENST00000485407 TAGLNQ01995 201 aaKnown RBP7.82□□□□□ -1.16
NHLRC3-205ENST00000485407 PRIMPOLQ96LW4 560 aa7.82□□□□□ -1.16
NHLRC3-205ENST00000485407 EGFL7Q9UHF1 273 aa7.82□□□□□ -1.16
NHLRC3-205ENST00000485407 SLC27A5Q9Y2P5 690 aa7.82□□□□□ -1.16
NHLRC3-205ENST00000485407 TBX22Q9Y458 520 aa7.82□□□□□ -1.16
NHLRC3-205ENST00000485407 RBM19Q9Y4C8 960 aaKnown RBP7.82□□□□□ -1.16
NHLRC3-205ENST00000485407 MSH6P52701 1360 aa7.82□□□□□ -1.16
NHLRC3-205ENST00000485407 SPATA31E1Q6ZUB1 1445 aa7.81□□□□□ -1.16
NHLRC3-205ENST00000485407 RNF223E7ERA6 249 aa7.81□□□□□ -1.16
NHLRC3-205ENST00000485407 ADH1BP00325 375 aa7.81□□□□□ -1.16
NHLRC3-205ENST00000485407 CANXP27824 592 aaKnown RBP7.81□□□□□ -1.16
NHLRC3-205ENST00000485407 CTHP32929 405 aa7.81□□□□□ -1.16
NHLRC3-205ENST00000485407 MCCD1P59942 119 aaPredicted RBP7.81□□□□□ -1.16
NHLRC3-205ENST00000485407 CLDN10P78369 228 aa7.81□□□□□ -1.16
NHLRC3-205ENST00000485407 PTK2Q05397 1052 aa7.81□□□□□ -1.16
NHLRC3-205ENST00000485407 LAPTM4AQ15012 233 aa7.81□□□□□ -1.16
NHLRC3-205ENST00000485407 TSNAXIP1Q2TAA8 658 aa7.81□□□□□ -1.16
NHLRC3-205ENST00000485407 MAP7D1Q3KQU3 841 aa7.81□□□□□ -1.16
NHLRC3-205ENST00000485407 PUS10Q3MIT2 529 aaKnown RBP7.81□□□□□ -1.16
NHLRC3-205ENST00000485407 MORN1Q5T089 497 aa7.81□□□□□ -1.16
NHLRC3-205ENST00000485407 Q6ZNB5 142 aa7.81□□□□□ -1.16
NHLRC3-205ENST00000485407 MAP10Q9P2G4 905 aa7.81□□□□□ -1.16
NHLRC3-205ENST00000485407 NOD1Q9Y239 953 aa7.81□□□□□ -1.16
NHLRC3-205ENST00000485407 PIK3R4Q99570 1358 aa7.81□□□□□ -1.16
NHLRC3-205ENST00000485407 PPM1GO15355 546 aaPredicted RBP7.8□□□□□ -1.16
NHLRC3-205ENST00000485407 SMARCA5O60264 1052 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms