RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 EFSO43281 561 aa7.39□□□□□ -1.23
VPS50-217ENST00000485140 PPP1R12BO60237 982 aaPredicted RBP7.39□□□□□ -1.23
VPS50-217ENST00000485140 EPXP11678 715 aa7.39□□□□□ -1.23
VPS50-217ENST00000485140 ZDHHC1Q8WTX9 485 aa7.39□□□□□ -1.23
VPS50-217ENST00000485140 ZNF594Q96JF6 807 aaPredicted RBP7.39□□□□□ -1.23
VPS50-217ENST00000485140 GGA1Q9UJY5 639 aa7.39□□□□□ -1.23
VPS50-217ENST00000485140 DCDC2BA2VCK2 349 aa7.38□□□□□ -1.23
VPS50-217ENST00000485140 SPDYE3A6NKU9 549 aa7.38□□□□□ -1.23
VPS50-217ENST00000485140 GNB5O14775 395 aa7.38□□□□□ -1.23
VPS50-217ENST00000485140 ALAS2P22557 587 aa7.38□□□□□ -1.23
VPS50-217ENST00000485140 CTBSQ01459 385 aa7.38□□□□□ -1.23
VPS50-217ENST00000485140 TSPAN10Q9H1Z9 355 aaPredicted RBP7.38□□□□□ -1.23
VPS50-217ENST00000485140 IGFBP4P22692 258 aa7.37□□□□□ -1.23
VPS50-217ENST00000485140 TXLNAP40222 546 aa7.37□□□□□ -1.23
VPS50-217ENST00000485140 KCNQ4P56696 695 aa7.37□□□□□ -1.23
VPS50-217ENST00000485140 IER5Q5VY09 327 aa7.37□□□□□ -1.23
VPS50-217ENST00000485140 ANKMY2Q8IV38 441 aa7.37□□□□□ -1.23
VPS50-217ENST00000485140 RRAGCQ9HB90 399 aa7.37□□□□□ -1.23
VPS50-217ENST00000485140 C11orf16Q9NQ32 467 aa7.37□□□□□ -1.23
VPS50-217ENST00000485140 KIAA1024Q9UPX6 916 aa7.37□□□□□ -1.23
VPS50-217ENST00000485140 USP3Q9Y6I4 520 aa7.37□□□□□ -1.23
VPS50-217ENST00000485140 ATAD2Q6PL18 1390 aa7.36□□□□□ -1.23
VPS50-217ENST00000485140 USP17L15C9J2P7 530 aa7.36□□□□□ -1.23
VPS50-217ENST00000485140 USP17L10C9JJH3 530 aa7.36□□□□□ -1.23
VPS50-217ENST00000485140 USP17L13C9JLJ4 530 aa7.36□□□□□ -1.23
VPS50-217ENST00000485140 USP17L12C9JPN9 530 aa7.36□□□□□ -1.23
VPS50-217ENST00000485140 USP17L11C9JVI0 530 aa7.36□□□□□ -1.23
VPS50-217ENST00000485140 USP17L21D6R901 530 aa7.36□□□□□ -1.23
VPS50-217ENST00000485140 USP17L18D6R9N7 530 aa7.36□□□□□ -1.23
VPS50-217ENST00000485140 USP17L22D6RA61 530 aa7.36□□□□□ -1.23
VPS50-217ENST00000485140 USP17L17D6RBQ6 530 aa7.36□□□□□ -1.23
VPS50-217ENST00000485140 USP17L19D6RCP7 530 aa7.36□□□□□ -1.23
VPS50-217ENST00000485140 USP17L20D6RJB6 530 aa7.36□□□□□ -1.23
VPS50-217ENST00000485140 SIN3BO75182 1162 aa7.36□□□□□ -1.23
VPS50-217ENST00000485140 EPB42P16452 691 aa7.36□□□□□ -1.23
VPS50-217ENST00000485140 LMOD1P29536 600 aaPredicted RBP7.36□□□□□ -1.23
VPS50-217ENST00000485140 USP17L24Q0WX57 530 aa7.36□□□□□ -1.23
VPS50-217ENST00000485140 PTK7Q13308 1070 aa7.36□□□□□ -1.23
VPS50-217ENST00000485140 C2orf49Q9BVC5 232 aaPredicted RBP7.36□□□□□ -1.23
VPS50-217ENST00000485140 PHACTR1Q9C0D0 580 aa7.36□□□□□ -1.23
VPS50-217ENST00000485140 PARP3Q9Y6F1 533 aa7.36□□□□□ -1.23
VPS50-217ENST00000485140 C2CD2LO14523 706 aa7.35□□□□□ -1.23
VPS50-217ENST00000485140 FOXO3O43524 673 aa7.35□□□□□ -1.23
VPS50-217ENST00000485140 CD33P20138 364 aa7.35□□□□□ -1.23
VPS50-217ENST00000485140 RTN1Q16799 776 aa7.35□□□□□ -1.23
VPS50-217ENST00000485140 KANK4Q5T7N3 995 aaPredicted RBP7.35□□□□□ -1.23
VPS50-217ENST00000485140 LRRC69Q6ZNQ3 347 aa7.35□□□□□ -1.23
VPS50-217ENST00000485140 TSEN2Q8NCE0 465 aaKnown RBP7.35□□□□□ -1.23
VPS50-217ENST00000485140 VTI1AQ96AJ9 217 aa7.35□□□□□ -1.23
VPS50-217ENST00000485140 HINFPQ9BQA5 517 aa7.35□□□□□ -1.23
VPS50-217ENST00000485140 SFI1A8K8P3 1242 aa7.34□□□□□ -1.23
VPS50-217ENST00000485140 NEURL1BA8MQ27 555 aa7.34□□□□□ -1.23
VPS50-217ENST00000485140 DKK1O94907 266 aa7.34□□□□□ -1.23
VPS50-217ENST00000485140 PCSK7Q16549 785 aa7.34□□□□□ -1.23
VPS50-217ENST00000485140 SCG3Q8WXD2 468 aaKnown RBP7.34□□□□□ -1.23
VPS50-217ENST00000485140 BTBD6Q96KE9 485 aa7.34□□□□□ -1.23
VPS50-217ENST00000485140 ELOA3CA0A087WX78 387 aaPredicted RBP7.33□□□□□ -1.24
VPS50-217ENST00000485140 ELOA3DA6NLF2 546 aaPredicted RBP7.33□□□□□ -1.24
VPS50-217ENST00000485140 ADARB2-AS1A8MUL3 147 aa7.33□□□□□ -1.24
VPS50-217ENST00000485140 SHISA8B8ZZ34 492 aa7.33□□□□□ -1.24
VPS50-217ENST00000485140 DPYDQ12882 1025 aa7.33□□□□□ -1.24
VPS50-217ENST00000485140 SWI5Q1ZZU3 235 aa7.33□□□□□ -1.24
VPS50-217ENST00000485140 ELOA3BQ3SY89 546 aa7.33□□□□□ -1.24
VPS50-217ENST00000485140 ALDH16A1Q8IZ83 802 aa7.33□□□□□ -1.24
VPS50-217ENST00000485140 ELOA3Q8NG57 546 aa7.33□□□□□ -1.24
VPS50-217ENST00000485140 FAM200AQ8TCP9 573 aa7.33□□□□□ -1.24
VPS50-217ENST00000485140 DCAF5Q96JK2 942 aa7.33□□□□□ -1.24
VPS50-217ENST00000485140 CEP63Q96MT8 703 aa7.33□□□□□ -1.24
VPS50-217ENST00000485140 KCNH4Q9UQ05 1017 aa7.33□□□□□ -1.24
VPS50-217ENST00000485140 CNTNAP5Q8WYK1 1306 aa7.32□□□□□ -1.24
VPS50-217ENST00000485140 ARID4AP29374 1257 aaPredicted RBP7.32□□□□□ -1.24
VPS50-217ENST00000485140 ELOAQ14241 798 aaKnown RBP7.32□□□□□ -1.24
VPS50-217ENST00000485140 CHSY3Q70JA7 882 aa7.32□□□□□ -1.24
VPS50-217ENST00000485140 C7orf43Q8WVR3 580 aa7.32□□□□□ -1.24
VPS50-217ENST00000485140 BRD7Q9NPI1 651 aa7.32□□□□□ -1.24
VPS50-217ENST00000485140 TGFBR3LH3BV60 316 aa7.31□□□□□ -1.24
VPS50-217ENST00000485140 RFX1P22670 979 aa7.31□□□□□ -1.24
VPS50-217ENST00000485140 DGKGP49619 791 aa7.31□□□□□ -1.24
VPS50-217ENST00000485140 SPEM2Q0P670 501 aa7.31□□□□□ -1.24
VPS50-217ENST00000485140 CRTC2Q53ET0 693 aaPredicted RBP7.31□□□□□ -1.24
VPS50-217ENST00000485140 TBCELQ5QJ74 424 aa7.31□□□□□ -1.24
VPS50-217ENST00000485140 SYT9Q86SS6 491 aa7.31□□□□□ -1.24
VPS50-217ENST00000485140 TNFRSF25Q93038 417 aa7.31□□□□□ -1.24
VPS50-217ENST00000485140 SUSD3Q96L08 255 aa7.31□□□□□ -1.24
VPS50-217ENST00000485140 HCN4Q9Y3Q4 1203 aa7.31□□□□□ -1.24
VPS50-217ENST00000485140 MSTNO14793 375 aa7.3□□□□□ -1.24
VPS50-217ENST00000485140 TYRO3Q06418 890 aa7.3□□□□□ -1.24
VPS50-217ENST00000485140 XP32Q5T750 250 aa7.3□□□□□ -1.24
VPS50-217ENST00000485140 PRDM6Q9NQX0 595 aa7.3□□□□□ -1.24
VPS50-217ENST00000485140 C21orf2O43822 256 aa7.29□□□□□ -1.24
VPS50-217ENST00000485140 WEE1P30291 646 aa7.29□□□□□ -1.24
VPS50-217ENST00000485140 GPAT2Q6NUI2 795 aa7.29□□□□□ -1.24
VPS50-217ENST00000485140 BTLAQ7Z6A9 289 aa7.29□□□□□ -1.24
VPS50-217ENST00000485140 FCHSD1Q86WN1 690 aa7.29□□□□□ -1.24
VPS50-217ENST00000485140 CHMP7Q8WUX9 453 aaPredicted RBP7.29□□□□□ -1.24
VPS50-217ENST00000485140 ZNF777Q9ULD5 760 aaPredicted RBP7.29□□□□□ -1.24
VPS50-217ENST00000485140 PCBP4P57723 403 aaKnown RBP7.28□□□□□ -1.24
VPS50-217ENST00000485140 CFAP70Q5T0N1 1121 aa7.28□□□□□ -1.24
VPS50-217ENST00000485140 LINC00114Q6XXX2 140 aa7.28□□□□□ -1.24
VPS50-217ENST00000485140 C1orf229Q6ZS94 237 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms