RNA–Protein interactions for RNA: ENST00000484874.2

CNKSR1-208, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-208ENST00000484874 CHPF2Q9P2E5 772 aa23.36■■□□□ 1.33
CNKSR1-208ENST00000484874 MAP3K15Q6ZN16 1313 aa23.35■■□□□ 1.33
CNKSR1-208ENST00000484874 DDR1Q08345 913 aa23.35■■□□□ 1.33
CNKSR1-208ENST00000484874 SLFN5Q08AF3 891 aa23.35■■□□□ 1.33
CNKSR1-208ENST00000484874 TBC1D9BQ66K14 1250 aa23.35■■□□□ 1.33
CNKSR1-208ENST00000484874 KIF6Q6ZMV9 814 aa23.35■■□□□ 1.33
CNKSR1-208ENST00000484874 TTLL7Q6ZT98 887 aa23.35■■□□□ 1.33
CNKSR1-208ENST00000484874 VAMP4O75379 141 aa23.34■■□□□ 1.33
CNKSR1-208ENST00000484874 ANXA1P04083 346 aa23.34■■□□□ 1.33
CNKSR1-208ENST00000484874 EXOSC9Q06265 439 aaKnown RBP23.34■■□□□ 1.33
CNKSR1-208ENST00000484874 COPS6Q7L5N1 327 aa23.34■■□□□ 1.33
CNKSR1-208ENST00000484874 SETDB2Q96T68 719 aa23.34■■□□□ 1.33
CNKSR1-208ENST00000484874 TRMT2AQ8IZ69 625 aaKnown RBP23.33■■□□□ 1.33
CNKSR1-208ENST00000484874 HLFQ16534 295 aa23.32■■□□□ 1.32
CNKSR1-208ENST00000484874 XAGE3Q8WTP9 111 aa23.32■■□□□ 1.32
CNKSR1-208ENST00000484874 SERPINB2P05120 415 aa23.31■■□□□ 1.32
CNKSR1-208ENST00000484874 GIGYF2Q6Y7W6 1299 aaKnown RBP23.31■■□□□ 1.32
CNKSR1-208ENST00000484874 SCN7AQ01118 1682 aa23.3■■□□□ 1.32
CNKSR1-208ENST00000484874 BICDL1Q6ZP65 573 aa23.3■■□□□ 1.32
CNKSR1-208ENST00000484874 TGFB2P61812 414 aa23.29■■□□□ 1.32
CNKSR1-208ENST00000484874 AIMP1Q12904 312 aaKnown RBP23.29■■□□□ 1.32
CNKSR1-208ENST00000484874 ANKRD13DQ6ZTN6 518 aa23.29■■□□□ 1.32
CNKSR1-208ENST00000484874 STK31Q9BXU1 1019 aa23.29■■□□□ 1.32
CNKSR1-208ENST00000484874 BCORQ6W2J9 1755 aa23.29■■□□□ 1.32
CNKSR1-208ENST00000484874 CARMIL3Q8ND23 1372 aa23.28■■□□□ 1.32
CNKSR1-208ENST00000484874 PLBD2Q8NHP8 589 aa23.28■■□□□ 1.32
CNKSR1-208ENST00000484874 CDCA7LQ96GN5 454 aa23.28■■□□□ 1.32
CNKSR1-208ENST00000484874 ZBTB3Q9H5J0 574 aa23.28■■□□□ 1.32
CNKSR1-208ENST00000484874 NIP7Q9Y221 180 aaKnown RBP eCLIP23.28■■□□□ 1.32
CNKSR1-208ENST00000484874 HNRNPUQ00839 825 aaKnown RBP eCLIP23.27■■□□□ 1.32
CNKSR1-208ENST00000484874 ZNF34Q8IZ26 560 aa23.27■■□□□ 1.32
CNKSR1-208ENST00000484874 HSP90AB3PQ58FF7 597 aa23.26■■□□□ 1.31
CNKSR1-208ENST00000484874 KLHL34Q8N239 644 aa23.26■■□□□ 1.31
CNKSR1-208ENST00000484874 PHAXQ9H814 394 aaKnown RBP23.26■■□□□ 1.31
CNKSR1-208ENST00000484874 ATP10DQ9P241 1426 aa23.25■■□□□ 1.31
CNKSR1-208ENST00000484874 SLC4A2P04920 1241 aa23.25■■□□□ 1.31
CNKSR1-208ENST00000484874 TPTE2Q6XPS3 522 aa23.25■■□□□ 1.31
CNKSR1-208ENST00000484874 NLGN2Q8NFZ4 835 aa23.25■■□□□ 1.31
CNKSR1-208ENST00000484874 NRXN2Q9P2S2 1712 aa23.25■■□□□ 1.31
CNKSR1-208ENST00000484874 C10orf71Q711Q0 1435 aa23.25■■□□□ 1.31
CNKSR1-208ENST00000484874 NUP98P52948 1817 aa23.24■■□□□ 1.31
CNKSR1-208ENST00000484874 TCIRG1Q13488 830 aa23.24■■□□□ 1.31
CNKSR1-208ENST00000484874 ZNF428Q96B54 188 aa23.24■■□□□ 1.31
CNKSR1-208ENST00000484874 PARP10Q53GL7 1025 aa23.23■■□□□ 1.31
CNKSR1-208ENST00000484874 KIF13BQ9NQT8 1826 aa23.23■■□□□ 1.31
CNKSR1-208ENST00000484874 CACNA1FO60840 1977 aa23.22■■□□□ 1.31
CNKSR1-208ENST00000484874 DDX58O95786 925 aaKnown RBP23.22■■□□□ 1.31
CNKSR1-208ENST00000484874 CT47B1P0C2W7 299 aaPredicted RBP23.22■■□□□ 1.31
CNKSR1-208ENST00000484874 PRR5LQ6MZQ0 368 aa23.22■■□□□ 1.31
CNKSR1-208ENST00000484874 NBPF5PQ86XG9 351 aaPredicted RBP23.22■■□□□ 1.31
CNKSR1-208ENST00000484874 BRIP1Q9BX63 1249 aa23.22■■□□□ 1.31
CNKSR1-208ENST00000484874 NYXQ9GZU5 481 aa23.22■■□□□ 1.31
CNKSR1-208ENST00000484874 PDZRN3Q9UPQ7 1066 aa23.22■■□□□ 1.31
CNKSR1-208ENST00000484874 AFDNP55196 1824 aaKnown RBP23.22■■□□□ 1.31
CNKSR1-208ENST00000484874 TRIM28Q13263 835 aaKnown RBP23.21■■□□□ 1.31
CNKSR1-208ENST00000484874 CNBD1Q8NA66 436 aa23.21■■□□□ 1.31
CNKSR1-208ENST00000484874 TCERG1O14776 1098 aaKnown RBP23.2■■□□□ 1.3
CNKSR1-208ENST00000484874 PPP1R42Q7Z4L9 355 aa23.2■■□□□ 1.3
CNKSR1-208ENST00000484874 RIC3Q7Z5B4 369 aa23.2■■□□□ 1.3
CNKSR1-208ENST00000484874 ZBED9Q6R2W3 1325 aa23.19■■□□□ 1.3
CNKSR1-208ENST00000484874 DCAF8L1A6NGE4 600 aa23.19■■□□□ 1.3
CNKSR1-208ENST00000484874 IBTKQ9P2D0 1353 aaPredicted RBP23.18■■□□□ 1.3
CNKSR1-208ENST00000484874 UBN2Q6ZU65 1347 aa23.18■■□□□ 1.3
CNKSR1-208ENST00000484874 KCNA3P22001 575 aa23.18■■□□□ 1.3
CNKSR1-208ENST00000484874 GPTP24298 496 aa23.18■■□□□ 1.3
CNKSR1-208ENST00000484874 PDE6BP35913 854 aa23.18■■□□□ 1.3
CNKSR1-208ENST00000484874 ST5P78524 1137 aa23.18■■□□□ 1.3
CNKSR1-208ENST00000484874 SUSD4Q5VX71 490 aa23.18■■□□□ 1.3
CNKSR1-208ENST00000484874 KSR2Q6VAB6 950 aa23.18■■□□□ 1.3
CNKSR1-208ENST00000484874 G2E3Q7L622 706 aa23.18■■□□□ 1.3
CNKSR1-208ENST00000484874 ISCA1Q9BUE6 129 aa23.18■■□□□ 1.3
CNKSR1-208ENST00000484874 A0A0G2JLW4 131 aa23.17■■□□□ 1.3
CNKSR1-208ENST00000484874 DPEP1P16444 411 aa23.17■■□□□ 1.3
CNKSR1-208ENST00000484874 NPHP1O15259 732 aa23.16■■□□□ 1.3
CNKSR1-208ENST00000484874 FLIIQ13045 1269 aa23.16■■□□□ 1.3
CNKSR1-208ENST00000484874 NLRP10Q86W26 655 aa23.16■■□□□ 1.3
CNKSR1-208ENST00000484874 METTL22Q9BUU2 404 aaPredicted RBP23.16■■□□□ 1.3
CNKSR1-208ENST00000484874 PXDNLA1KZ92 1463 aa23.16■■□□□ 1.3
CNKSR1-208ENST00000484874 RNF123Q5XPI4 1314 aa23.15■■□□□ 1.3
CNKSR1-208ENST00000484874 KLRG2A4D1S0 409 aaPredicted RBP23.15■■□□□ 1.3
CNKSR1-208ENST00000484874 PI4KAP2A4QPH2 592 aa23.15■■□□□ 1.3
CNKSR1-208ENST00000484874 GTF2E1P29083 439 aaPredicted RBP23.15■■□□□ 1.3
CNKSR1-208ENST00000484874 PI4KAP1Q8N8J0 262 aa23.15■■□□□ 1.3
CNKSR1-208ENST00000484874 UTP14AQ9BVJ6 771 aaKnown RBP23.15■■□□□ 1.3
CNKSR1-208ENST00000484874 H0YIN7 160 aa23.14■■□□□ 1.29
CNKSR1-208ENST00000484874 NTSR2O95665 410 aa23.14■■□□□ 1.29
CNKSR1-208ENST00000484874 ALDH1L2Q3SY69 923 aa23.14■■□□□ 1.29
CNKSR1-208ENST00000484874 SLC10A5Q5PT55 438 aa23.14■■□□□ 1.29
CNKSR1-208ENST00000484874 PIM2Q9P1W9 311 aa23.14■■□□□ 1.29
CNKSR1-208ENST00000484874 FAM177BA6PVY3 158 aa23.13■■□□□ 1.29
CNKSR1-208ENST00000484874 MAP3K2Q9Y2U5 619 aa23.13■■□□□ 1.29
CNKSR1-208ENST00000484874 GPR162Q16538 588 aa23.12■■□□□ 1.29
CNKSR1-208ENST00000484874 CCDC24Q8N4L8 307 aa23.12■■□□□ 1.29
CNKSR1-208ENST00000484874 CCDC191Q8NCU4 936 aa23.12■■□□□ 1.29
CNKSR1-208ENST00000484874 KIAA1551Q9HCM1 1747 aa23.11■■□□□ 1.29
CNKSR1-208ENST00000484874 ATP5J2-PTCD1G3V325 749 aa23.11■■□□□ 1.29
CNKSR1-208ENST00000484874 CHRNA5P30532 468 aa23.11■■□□□ 1.29
CNKSR1-208ENST00000484874 FKBP5Q13451 457 aaPredicted RBP23.11■■□□□ 1.29
CNKSR1-208ENST00000484874 ERFEQ4G0M1 354 aa23.11■■□□□ 1.29
CNKSR1-208ENST00000484874 C2CD5Q86YS7 1000 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms