RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 ARAFP10398 606 aa8.67□□□□□ -1.02
SMC4-215ENST00000484799 ALAS2P22557 587 aa8.67□□□□□ -1.02
SMC4-215ENST00000484799 ADH6P28332 368 aa8.67□□□□□ -1.02
SMC4-215ENST00000484799 EPHA4P54764 986 aa8.67□□□□□ -1.02
SMC4-215ENST00000484799 DPYDQ12882 1025 aa8.67□□□□□ -1.02
SMC4-215ENST00000484799 LAMC2Q13753 1193 aa8.67□□□□□ -1.02
SMC4-215ENST00000484799 HIF1AQ16665 826 aa8.67□□□□□ -1.02
SMC4-215ENST00000484799 KCTD17Q8N5Z5 321 aa8.67□□□□□ -1.02
SMC4-215ENST00000484799 NGLY1Q96IV0 654 aa8.67□□□□□ -1.02
SMC4-215ENST00000484799 CEP63Q96MT8 703 aa8.67□□□□□ -1.02
SMC4-215ENST00000484799 PHACTR1Q9C0D0 580 aa8.67□□□□□ -1.02
SMC4-215ENST00000484799 MKL2Q9ULH7 1088 aa8.67□□□□□ -1.02
SMC4-215ENST00000484799 EML1O00423 815 aa8.66□□□□□ -1.02
SMC4-215ENST00000484799 C2CD2LO14523 706 aa8.66□□□□□ -1.02
SMC4-215ENST00000484799 FAM157BP0CG42 384 aa8.66□□□□□ -1.02
SMC4-215ENST00000484799 SAMD5Q5TGI4 173 aa8.66□□□□□ -1.02
SMC4-215ENST00000484799 ANKMY2Q8IV38 441 aa8.66□□□□□ -1.02
SMC4-215ENST00000484799 ZNF295-AS1Q8N0V1 137 aa8.66□□□□□ -1.02
SMC4-215ENST00000484799 CDCA8Q53HL2 280 aa8.65□□□□□ -1.02
SMC4-215ENST00000484799 FAM182BQ5T319 152 aa8.65□□□□□ -1.02
SMC4-215ENST00000484799 FAM200AQ8TCP9 573 aa8.65□□□□□ -1.02
SMC4-215ENST00000484799 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMC4-215ENST00000484799 FAM196BA6NMK8 535 aa8.64□□□□□ -1.03
SMC4-215ENST00000484799 PTK7Q13308 1070 aa8.64□□□□□ -1.03
SMC4-215ENST00000484799 KANK4Q5T7N3 995 aaPredicted RBP8.64□□□□□ -1.03
SMC4-215ENST00000484799 USP17L15C9J2P7 530 aa8.63□□□□□ -1.03
SMC4-215ENST00000484799 USP17L10C9JJH3 530 aa8.63□□□□□ -1.03
SMC4-215ENST00000484799 USP17L13C9JLJ4 530 aa8.63□□□□□ -1.03
SMC4-215ENST00000484799 USP17L12C9JPN9 530 aa8.63□□□□□ -1.03
SMC4-215ENST00000484799 USP17L11C9JVI0 530 aa8.63□□□□□ -1.03
SMC4-215ENST00000484799 USP17L21D6R901 530 aa8.63□□□□□ -1.03
SMC4-215ENST00000484799 USP17L18D6R9N7 530 aa8.63□□□□□ -1.03
SMC4-215ENST00000484799 USP17L22D6RA61 530 aa8.63□□□□□ -1.03
SMC4-215ENST00000484799 USP17L17D6RBQ6 530 aa8.63□□□□□ -1.03
SMC4-215ENST00000484799 USP17L19D6RCP7 530 aa8.63□□□□□ -1.03
SMC4-215ENST00000484799 USP17L20D6RJB6 530 aa8.63□□□□□ -1.03
SMC4-215ENST00000484799 PCBP4P57723 403 aaKnown RBP8.63□□□□□ -1.03
SMC4-215ENST00000484799 USP17L24Q0WX57 530 aa8.63□□□□□ -1.03
SMC4-215ENST00000484799 CRTC2Q53ET0 693 aaPredicted RBP8.63□□□□□ -1.03
SMC4-215ENST00000484799 SH3PXD2AQ5TCZ1 1133 aa8.63□□□□□ -1.03
SMC4-215ENST00000484799 SLCO4C1Q6ZQN7 724 aa8.63□□□□□ -1.03
SMC4-215ENST00000484799 ALDH16A1Q8IZ83 802 aa8.63□□□□□ -1.03
SMC4-215ENST00000484799 BTBD6Q96KE9 485 aa8.63□□□□□ -1.03
SMC4-215ENST00000484799 ZMYND15Q9H091 742 aa8.63□□□□□ -1.03
SMC4-215ENST00000484799 AVENQ9NQS1 362 aaPredicted RBP8.63□□□□□ -1.03
SMC4-215ENST00000484799 SHISA8B8ZZ34 492 aa8.61□□□□□ -1.03
SMC4-215ENST00000484799 LGR5O75473 907 aa8.61□□□□□ -1.03
SMC4-215ENST00000484799 EPXP11678 715 aa8.61□□□□□ -1.03
SMC4-215ENST00000484799 HIRAP54198 1017 aaPredicted RBP8.61□□□□□ -1.03
SMC4-215ENST00000484799 GPAT2Q6NUI2 795 aa8.61□□□□□ -1.03
SMC4-215ENST00000484799 STAG2Q8N3U4 1231 aa8.61□□□□□ -1.03
SMC4-215ENST00000484799 SUSD3Q96L08 255 aa8.61□□□□□ -1.03
SMC4-215ENST00000484799 BRD7Q9NPI1 651 aa8.61□□□□□ -1.03
SMC4-215ENST00000484799 KCNH4Q9UQ05 1017 aa8.61□□□□□ -1.03
SMC4-215ENST00000484799 ZNF468Q5VIY5 522 aaPredicted RBP8.6□□□□□ -1.03
SMC4-215ENST00000484799 SYT9Q86SS6 491 aa8.6□□□□□ -1.03
SMC4-215ENST00000484799 CCDC97Q96F63 343 aaPredicted RBP8.6□□□□□ -1.03
SMC4-215ENST00000484799 C2orf49Q9BVC5 232 aaPredicted RBP8.6□□□□□ -1.03
SMC4-215ENST00000484799 GTF3C3Q9Y5Q9 886 aa8.6□□□□□ -1.03
SMC4-215ENST00000484799 IGFBP4P22692 258 aa8.59□□□□□ -1.03
SMC4-215ENST00000484799 SFSWAPQ12872 951 aaKnown RBP8.59□□□□□ -1.03
SMC4-215ENST00000484799 C1orf229Q6ZS94 237 aaPredicted RBP8.59□□□□□ -1.03
SMC4-215ENST00000484799 HSH2DQ96JZ2 352 aa8.59□□□□□ -1.03
SMC4-215ENST00000484799 C21orf2O43822 256 aa8.58□□□□□ -1.04
SMC4-215ENST00000484799 DKK1O94907 266 aa8.58□□□□□ -1.04
SMC4-215ENST00000484799 IGHA1P01876 353 aa8.58□□□□□ -1.04
SMC4-215ENST00000484799 SNRPNP63162 240 aaKnown RBP8.58□□□□□ -1.04
SMC4-215ENST00000484799 PNMA5Q96PV4 448 aa8.58□□□□□ -1.04
SMC4-215ENST00000484799 STRN4Q9NRL3 753 aa8.58□□□□□ -1.04
SMC4-215ENST00000484799 NOP53Q9NZM5 478 aaKnown RBP8.58□□□□□ -1.04
SMC4-215ENST00000484799 GNB5O14775 395 aa8.57□□□□□ -1.04
SMC4-215ENST00000484799 EFSO43281 561 aa8.57□□□□□ -1.04
SMC4-215ENST00000484799 SPEM2Q0P670 501 aa8.57□□□□□ -1.04
SMC4-215ENST00000484799 GRIN2CQ14957 1233 aa8.57□□□□□ -1.04
SMC4-215ENST00000484799 RTN1Q16799 776 aa8.57□□□□□ -1.04
SMC4-215ENST00000484799 CFAP70Q5T0N1 1121 aa8.57□□□□□ -1.04
SMC4-215ENST00000484799 CHSY3Q70JA7 882 aa8.57□□□□□ -1.04
SMC4-215ENST00000484799 IGFLR1Q9H665 355 aa8.57□□□□□ -1.04
SMC4-215ENST00000484799 EPB42P16452 691 aa8.56□□□□□ -1.04
SMC4-215ENST00000484799 GSK3AP49840 483 aa8.56□□□□□ -1.04
SMC4-215ENST00000484799 ALYREFQ86V81 257 aaKnown RBP8.56□□□□□ -1.04
SMC4-215ENST00000484799 ZNF280CQ8ND82 737 aa8.56□□□□□ -1.04
SMC4-215ENST00000484799 NOVA2Q9UNW9 492 aaKnown RBP8.56□□□□□ -1.04
SMC4-215ENST00000484799 ELOA3CA0A087WX78 387 aaPredicted RBP8.55□□□□□ -1.04
SMC4-215ENST00000484799 ELOA3DA6NLF2 546 aaPredicted RBP8.55□□□□□ -1.04
SMC4-215ENST00000484799 TBC1D8BQ0IIM8 1120 aa8.55□□□□□ -1.04
SMC4-215ENST00000484799 ELOA3BQ3SY89 546 aa8.55□□□□□ -1.04
SMC4-215ENST00000484799 BTLAQ7Z6A9 289 aa8.55□□□□□ -1.04
SMC4-215ENST00000484799 ELOA3Q8NG57 546 aa8.55□□□□□ -1.04
SMC4-215ENST00000484799 C7orf43Q8WVR3 580 aa8.55□□□□□ -1.04
SMC4-215ENST00000484799 BHMTQ93088 406 aa8.55□□□□□ -1.04
SMC4-215ENST00000484799 DCAF5Q96JK2 942 aa8.55□□□□□ -1.04
SMC4-215ENST00000484799 SPDYE3A6NKU9 549 aa8.54□□□□□ -1.04
SMC4-215ENST00000484799 FOXO3O43524 673 aa8.54□□□□□ -1.04
SMC4-215ENST00000484799 SIN3BO75182 1162 aa8.54□□□□□ -1.04
SMC4-215ENST00000484799 FCHSD1Q86WN1 690 aa8.54□□□□□ -1.04
SMC4-215ENST00000484799 SERPINA10Q9UK55 444 aa8.54□□□□□ -1.04
SMC4-215ENST00000484799 MSTNO14793 375 aa8.53□□□□□ -1.04
SMC4-215ENST00000484799 POTEAQ6S8J7 498 aa8.53□□□□□ -1.04
SMC4-215ENST00000484799 SLC30A3Q99726 388 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms