RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 PROCP04070 461 aa10□□□□□ -0.81
SCAF11-207ENST00000484275 SIX5Q8N196 739 aa10□□□□□ -0.81
SCAF11-207ENST00000484275 LARGE2Q8N3Y3 721 aa10□□□□□ -0.81
SCAF11-207ENST00000484275 TSEN2Q8NCE0 465 aaKnown RBP10□□□□□ -0.81
SCAF11-207ENST00000484275 ZNF594Q96JF6 807 aaPredicted RBP10□□□□□ -0.81
SCAF11-207ENST00000484275 SPOCK3Q9BQ16 436 aa10□□□□□ -0.81
SCAF11-207ENST00000484275 SFI1A8K8P3 1242 aa9.99□□□□□ -0.81
SCAF11-207ENST00000484275 ADH6P28332 368 aa9.99□□□□□ -0.81
SCAF11-207ENST00000484275 DGKGP49619 791 aa9.99□□□□□ -0.81
SCAF11-207ENST00000484275 PCBP4P57723 403 aaKnown RBP9.99□□□□□ -0.81
SCAF11-207ENST00000484275 POTEAQ6S8J7 498 aa9.99□□□□□ -0.81
SCAF11-207ENST00000484275 MARK1Q9P0L2 795 aa9.99□□□□□ -0.81
SCAF11-207ENST00000484275 TFIP11Q9UBB9 837 aaKnown RBP9.99□□□□□ -0.81
SCAF11-207ENST00000484275 PALM3A6NDB9 673 aaPredicted RBP9.98□□□□□ -0.81
SCAF11-207ENST00000484275 ZNF468Q5VIY5 522 aaPredicted RBP9.98□□□□□ -0.81
SCAF11-207ENST00000484275 AVENQ9NQS1 362 aaPredicted RBP9.98□□□□□ -0.81
SCAF11-207ENST00000484275 MAFBQ9Y5Q3 323 aaPredicted RBP9.98□□□□□ -0.81
SCAF11-207ENST00000484275 M0R2N6 131 aa9.97□□□□□ -0.81
SCAF11-207ENST00000484275 MSTNO14793 375 aa9.97□□□□□ -0.81
SCAF11-207ENST00000484275 C21orf2O43822 256 aa9.97□□□□□ -0.81
SCAF11-207ENST00000484275 PSMA6P60900 246 aaKnown RBP9.97□□□□□ -0.81
SCAF11-207ENST00000484275 LAMC2Q13753 1193 aa9.97□□□□□ -0.81
SCAF11-207ENST00000484275 CHSY3Q70JA7 882 aa9.97□□□□□ -0.81
SCAF11-207ENST00000484275 HCN4Q9Y3Q4 1203 aa9.97□□□□□ -0.81
SCAF11-207ENST00000484275 HIRAP54198 1017 aaPredicted RBP9.96□□□□□ -0.82
SCAF11-207ENST00000484275 PRR12Q9ULL5 1215 aa9.96□□□□□ -0.82
SCAF11-207ENST00000484275 SFSWAPQ12872 951 aaKnown RBP9.95□□□□□ -0.82
SCAF11-207ENST00000484275 RHPN1Q8TCX5 695 aa9.95□□□□□ -0.82
SCAF11-207ENST00000484275 GNB5O14775 395 aa9.94□□□□□ -0.82
SCAF11-207ENST00000484275 HSH2DQ96JZ2 352 aa9.94□□□□□ -0.82
SCAF11-207ENST00000484275 SLC30A3Q99726 388 aa9.94□□□□□ -0.82
SCAF11-207ENST00000484275 MDFIQ99750 246 aa9.94□□□□□ -0.82
SCAF11-207ENST00000484275 PHACTR1Q9C0D0 580 aa9.94□□□□□ -0.82
SCAF11-207ENST00000484275 GPC6Q9Y625 555 aaPredicted RBP9.94□□□□□ -0.82
SCAF11-207ENST00000484275 RASA1P20936 1047 aa9.93□□□□□ -0.82
SCAF11-207ENST00000484275 C1orf53Q5VUE5 145 aa9.93□□□□□ -0.82
SCAF11-207ENST00000484275 SYT9Q86SS6 491 aa9.93□□□□□ -0.82
SCAF11-207ENST00000484275 ZNF280CQ8ND82 737 aa9.93□□□□□ -0.82
SCAF11-207ENST00000484275 CRTC2Q53ET0 693 aaPredicted RBP9.92□□□□□ -0.82
SCAF11-207ENST00000484275 A6NJR5 290 aa9.91□□□□□ -0.82
SCAF11-207ENST00000484275 PPP1R12BO60237 982 aaPredicted RBP9.91□□□□□ -0.82
SCAF11-207ENST00000484275 KANK4Q5T7N3 995 aaPredicted RBP9.91□□□□□ -0.82
SCAF11-207ENST00000484275 PPP1R12CQ9BZL4 782 aa9.91□□□□□ -0.82
SCAF11-207ENST00000484275 NEUROD4Q9HD90 331 aa9.91□□□□□ -0.82
SCAF11-207ENST00000484275 LGR5O75473 907 aa9.9□□□□□ -0.82
SCAF11-207ENST00000484275 ALYREFQ86V81 257 aaKnown RBP9.9□□□□□ -0.82
SCAF11-207ENST00000484275 GAS2L2Q8NHY3 880 aa9.9□□□□□ -0.82
SCAF11-207ENST00000484275 SUSD3Q96L08 255 aa9.9□□□□□ -0.82
SCAF11-207ENST00000484275 CALR3Q96L12 384 aaKnown RBP9.9□□□□□ -0.82
SCAF11-207ENST00000484275 C2orf49Q9BVC5 232 aaPredicted RBP9.9□□□□□ -0.82
SCAF11-207ENST00000484275 ATAD2Q6PL18 1390 aa9.89□□□□□ -0.83
SCAF11-207ENST00000484275 ELOA3CA0A087WX78 387 aaPredicted RBP9.89□□□□□ -0.83
SCAF11-207ENST00000484275 ELOA3DA6NLF2 546 aaPredicted RBP9.89□□□□□ -0.83
SCAF11-207ENST00000484275 SEC13P55735 322 aa9.89□□□□□ -0.83
SCAF11-207ENST00000484275 PTK7Q13308 1070 aa9.89□□□□□ -0.83
SCAF11-207ENST00000484275 ELOA3BQ3SY89 546 aa9.89□□□□□ -0.83
SCAF11-207ENST00000484275 ALDH16A1Q8IZ83 802 aa9.89□□□□□ -0.83
SCAF11-207ENST00000484275 ELOA3Q8NG57 546 aa9.89□□□□□ -0.83
SCAF11-207ENST00000484275 SCG3Q8WXD2 468 aaKnown RBP9.89□□□□□ -0.83
SCAF11-207ENST00000484275 TRIM11Q96F44 468 aa9.89□□□□□ -0.83
SCAF11-207ENST00000484275 CHMP3Q9Y3E7 222 aa9.89□□□□□ -0.83
SCAF11-207ENST00000484275 TYRO3Q06418 890 aa9.88□□□□□ -0.83
SCAF11-207ENST00000484275 RAB44Q7Z6P3 723 aaPredicted RBP9.88□□□□□ -0.83
SCAF11-207ENST00000484275 CEP63Q96MT8 703 aa9.88□□□□□ -0.83
SCAF11-207ENST00000484275 BRD7Q9NPI1 651 aa9.88□□□□□ -0.83
SCAF11-207ENST00000484275 SIN3BO75182 1162 aa9.87□□□□□ -0.83
SCAF11-207ENST00000484275 SPEM2Q0P670 501 aa9.87□□□□□ -0.83
SCAF11-207ENST00000484275 STAG2Q8N3U4 1231 aa9.87□□□□□ -0.83
SCAF11-207ENST00000484275 RBM19Q9Y4C8 960 aaKnown RBP9.87□□□□□ -0.83
SCAF11-207ENST00000484275 C1QTNF9BB2RNN3 333 aa9.86□□□□□ -0.83
SCAF11-207ENST00000484275 ADAM23O75077 832 aa9.86□□□□□ -0.83
SCAF11-207ENST00000484275 KCNQ4P56696 695 aa9.86□□□□□ -0.83
SCAF11-207ENST00000484275 DPYDQ12882 1025 aa9.86□□□□□ -0.83
SCAF11-207ENST00000484275 CD163Q86VB7 1156 aa9.86□□□□□ -0.83
SCAF11-207ENST00000484275 CHMP7Q8WUX9 453 aaPredicted RBP9.86□□□□□ -0.83
SCAF11-207ENST00000484275 ADARB2-AS1A8MUL3 147 aa9.85□□□□□ -0.83
SCAF11-207ENST00000484275 PIK3R2O00459 728 aa9.85□□□□□ -0.83
SCAF11-207ENST00000484275 CHRNA4P43681 627 aa9.85□□□□□ -0.83
SCAF11-207ENST00000484275 BAG6P46379 1132 aa9.85□□□□□ -0.83
SCAF11-207ENST00000484275 LARP1Q6PKG0 1096 aaKnown RBP9.85□□□□□ -0.83
SCAF11-207ENST00000484275 NGLY1Q96IV0 654 aa9.85□□□□□ -0.83
SCAF11-207ENST00000484275 NOP53Q9NZM5 478 aaKnown RBP9.85□□□□□ -0.83
SCAF11-207ENST00000484275 ANKIB1Q9P2G1 1089 aa9.85□□□□□ -0.83
SCAF11-207ENST00000484275 STARD13Q9Y3M8 1113 aa9.85□□□□□ -0.83
SCAF11-207ENST00000484275 USP17L15C9J2P7 530 aa9.84□□□□□ -0.83
SCAF11-207ENST00000484275 USP17L10C9JJH3 530 aa9.84□□□□□ -0.83
SCAF11-207ENST00000484275 USP17L13C9JLJ4 530 aa9.84□□□□□ -0.83
SCAF11-207ENST00000484275 USP17L12C9JPN9 530 aa9.84□□□□□ -0.83
SCAF11-207ENST00000484275 USP17L11C9JVI0 530 aa9.84□□□□□ -0.83
SCAF11-207ENST00000484275 USP17L21D6R901 530 aa9.84□□□□□ -0.83
SCAF11-207ENST00000484275 USP17L18D6R9N7 530 aa9.84□□□□□ -0.83
SCAF11-207ENST00000484275 USP17L22D6RA61 530 aa9.84□□□□□ -0.83
SCAF11-207ENST00000484275 USP17L17D6RBQ6 530 aa9.84□□□□□ -0.83
SCAF11-207ENST00000484275 USP17L19D6RCP7 530 aa9.84□□□□□ -0.83
SCAF11-207ENST00000484275 USP17L20D6RJB6 530 aa9.84□□□□□ -0.83
SCAF11-207ENST00000484275 LMOD1P29536 600 aaPredicted RBP9.84□□□□□ -0.83
SCAF11-207ENST00000484275 USP17L24Q0WX57 530 aa9.84□□□□□ -0.83
SCAF11-207ENST00000484275 COL9A3Q14050 684 aaPredicted RBP9.84□□□□□ -0.83
SCAF11-207ENST00000484275 TNFRSF25Q93038 417 aa9.84□□□□□ -0.83
SCAF11-207ENST00000484275 PLVAPQ9BX97 442 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms