RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 ME3Q16798 604 aa23.58■■□□□ 1.37
RPUSD3-216ENST00000484134 FAM173BQ6P4H8 233 aa23.58■■□□□ 1.37
RPUSD3-216ENST00000484134 LUZP1Q86V48 1076 aa23.58■■□□□ 1.37
RPUSD3-216ENST00000484134 MRVI1Q9Y6F6 885 aa23.58■■□□□ 1.37
RPUSD3-216ENST00000484134 NALCNQ8IZF0 1738 aa23.58■■□□□ 1.36
RPUSD3-216ENST00000484134 CHAF1AQ13111 956 aaPredicted RBP23.57■■□□□ 1.36
RPUSD3-216ENST00000484134 COL9A3Q14050 684 aaPredicted RBP23.57■■□□□ 1.36
RPUSD3-216ENST00000484134 USP6P35125 1406 aa23.57■■□□□ 1.36
RPUSD3-216ENST00000484134 ROBO2Q9HCK4 1378 aa23.57■■□□□ 1.36
RPUSD3-216ENST00000484134 NBPF7P0C2Y1 421 aaPredicted RBP23.57■■□□□ 1.36
RPUSD3-216ENST00000484134 VPS53Q5VIR6 699 aa23.57■■□□□ 1.36
RPUSD3-216ENST00000484134 PRPF40BQ6NWY9 871 aaKnown RBP23.57■■□□□ 1.36
RPUSD3-216ENST00000484134 FAM200AQ8TCP9 573 aa23.57■■□□□ 1.36
RPUSD3-216ENST00000484134 KIF1BPQ96EK5 621 aa23.57■■□□□ 1.36
RPUSD3-216ENST00000484134 LRMPQ12912 555 aa23.56■■□□□ 1.36
RPUSD3-216ENST00000484134 ZSWIM6Q9HCJ5 1215 aa23.56■■□□□ 1.36
RPUSD3-216ENST00000484134 PLEKHG3A1L390 1219 aa23.56■■□□□ 1.36
RPUSD3-216ENST00000484134 IL17REQ8NFR9 667 aa23.56■■□□□ 1.36
RPUSD3-216ENST00000484134 GOLGA6L6A8MZA4 724 aa23.55■■□□□ 1.36
RPUSD3-216ENST00000484134 FERMT3Q86UX7 667 aa23.55■■□□□ 1.36
RPUSD3-216ENST00000484134 NRBP1Q9UHY1 535 aa23.55■■□□□ 1.36
RPUSD3-216ENST00000484134 TYRO3Q06418 890 aa23.55■■□□□ 1.36
RPUSD3-216ENST00000484134 IGSF1Q8N6C5 1336 aa23.55■■□□□ 1.36
RPUSD3-216ENST00000484134 N4BP2Q86UW6 1770 aaPredicted RBP23.55■■□□□ 1.36
RPUSD3-216ENST00000484134 CCDC186Q7Z3E2 898 aa23.54■■□□□ 1.36
RPUSD3-216ENST00000484134 CACNA1FO60840 1977 aa23.54■■□□□ 1.36
RPUSD3-216ENST00000484134 PXDNLA1KZ92 1463 aa23.54■■□□□ 1.36
RPUSD3-216ENST00000484134 GNAT3A8MTJ3 354 aa23.53■■□□□ 1.36
RPUSD3-216ENST00000484134 NCBP1Q09161 790 aaKnown RBP23.53■■□□□ 1.36
RPUSD3-216ENST00000484134 MAP3K11Q16584 847 aa23.53■■□□□ 1.36
RPUSD3-216ENST00000484134 CDC37L1Q7L3B6 337 aa23.53■■□□□ 1.36
RPUSD3-216ENST00000484134 CKAP2LQ8IYA6 745 aa23.53■■□□□ 1.36
RPUSD3-216ENST00000484134 ZSCAN31Q96LW9 406 aaPredicted RBP23.53■■□□□ 1.36
RPUSD3-216ENST00000484134 SH2B1Q9NRF2 756 aaPredicted RBP23.53■■□□□ 1.36
RPUSD3-216ENST00000484134 TPCN1Q9ULQ1 816 aa23.53■■□□□ 1.36
RPUSD3-216ENST00000484134 CYP46A1Q9Y6A2 500 aa23.53■■□□□ 1.36
RPUSD3-216ENST00000484134 KCNB2Q92953 911 aa23.53■■□□□ 1.36
RPUSD3-216ENST00000484134 NUP62CLQ9H1M0 184 aa23.53■■□□□ 1.36
RPUSD3-216ENST00000484134 MAP3K5Q99683 1374 aa23.53■■□□□ 1.36
RPUSD3-216ENST00000484134 HTATSF1O43719 755 aaKnown RBP23.52■■□□□ 1.36
RPUSD3-216ENST00000484134 CBX8Q9HC52 389 aa23.52■■□□□ 1.36
RPUSD3-216ENST00000484134 IGSF3O75054 1194 aa23.52■■□□□ 1.36
RPUSD3-216ENST00000484134 LARP1BQ659C4 914 aaKnown RBP23.52■■□□□ 1.36
RPUSD3-216ENST00000484134 TM6SF1Q9BZW5 370 aa23.52■■□□□ 1.36
RPUSD3-216ENST00000484134 FLT4P35916 1363 aa23.52■■□□□ 1.36
RPUSD3-216ENST00000484134 LRRC37A3O60309 1634 aa23.52■■□□□ 1.36
RPUSD3-216ENST00000484134 CRYBG1Q9Y4K1 1723 aa23.52■■□□□ 1.36
RPUSD3-216ENST00000484134 FMN2Q9NZ56 1722 aa23.51■■□□□ 1.35
RPUSD3-216ENST00000484134 USP42Q9H9J4 1324 aaKnown RBP23.51■■□□□ 1.35
RPUSD3-216ENST00000484134 HDGFL1Q5TGJ6 251 aa23.51■■□□□ 1.35
RPUSD3-216ENST00000484134 SBNO1A3KN83 1393 aa23.51■■□□□ 1.35
RPUSD3-216ENST00000484134 NECTIN1Q15223 517 aa23.51■■□□□ 1.35
RPUSD3-216ENST00000484134 MLECQ14165 292 aa23.5■■□□□ 1.35
RPUSD3-216ENST00000484134 ANO6Q4KMQ2 910 aa23.5■■□□□ 1.35
RPUSD3-216ENST00000484134 C16orf45Q96MC5 204 aaPredicted RBP23.5■■□□□ 1.35
RPUSD3-216ENST00000484134 DACT1Q9NYF0 836 aa23.5■■□□□ 1.35
RPUSD3-216ENST00000484134 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.5■■□□□ 1.35
RPUSD3-216ENST00000484134 GLRX3O76003 335 aaKnown RBP23.5■■□□□ 1.35
RPUSD3-216ENST00000484134 KRT85P78386 507 aa23.5■■□□□ 1.35
RPUSD3-216ENST00000484134 NAA30Q147X3 362 aaPredicted RBP23.5■■□□□ 1.35
RPUSD3-216ENST00000484134 TAF7Q15545 349 aaPredicted RBP23.5■■□□□ 1.35
RPUSD3-216ENST00000484134 AMPHP49418 695 aa23.49■■□□□ 1.35
RPUSD3-216ENST00000484134 KIF20AO95235 890 aa23.48■■□□□ 1.35
RPUSD3-216ENST00000484134 TFIP11Q9UBB9 837 aaKnown RBP23.48■■□□□ 1.35
RPUSD3-216ENST00000484134 ELP1O95163 1332 aa23.48■■□□□ 1.35
RPUSD3-216ENST00000484134 TOPAZ1Q8N9V7 1692 aa23.47■■□□□ 1.35
RPUSD3-216ENST00000484134 TTC41PQ6P2S7 1318 aa23.47■■□□□ 1.35
RPUSD3-216ENST00000484134 TTC21AQ8NDW8 1320 aa23.47■■□□□ 1.35
RPUSD3-216ENST00000484134 ZNF75DP51815 510 aa23.47■■□□□ 1.35
RPUSD3-216ENST00000484134 ZSCAN25Q6NSZ9 544 aa23.47■■□□□ 1.35
RPUSD3-216ENST00000484134 PLA2G4DQ86XP0 818 aa23.47■■□□□ 1.35
RPUSD3-216ENST00000484134 RUFY2Q8WXA3 655 aa23.47■■□□□ 1.35
RPUSD3-216ENST00000484134 TNMDQ9H2S6 317 aa23.47■■□□□ 1.35
RPUSD3-216ENST00000484134 BEND3Q5T5X7 828 aa23.47■■□□□ 1.35
RPUSD3-216ENST00000484134 DRC7Q8IY82 874 aa23.47■■□□□ 1.35
RPUSD3-216ENST00000484134 EIF2S2P20042 333 aaKnown RBP23.46■■□□□ 1.35
RPUSD3-216ENST00000484134 CREB3L3Q68CJ9 461 aa23.46■■□□□ 1.35
RPUSD3-216ENST00000484134 TCEANC2Q96MN5 208 aa23.46■■□□□ 1.35
RPUSD3-216ENST00000484134 RBM8AQ9Y5S9 174 aaKnown RBP23.46■■□□□ 1.35
RPUSD3-216ENST00000484134 TRIM5Q9C035 493 aa23.45■■□□□ 1.35
RPUSD3-216ENST00000484134 CCDC171Q6TFL3 1326 aa23.45■■□□□ 1.34
RPUSD3-216ENST00000484134 OS9Q13438 667 aaPredicted RBP23.45■■□□□ 1.34
RPUSD3-216ENST00000484134 PI4KAP2A4QPH2 592 aa23.44■■□□□ 1.34
RPUSD3-216ENST00000484134 SMTNL1A8MU46 457 aa23.44■■□□□ 1.34
RPUSD3-216ENST00000484134 TNNT1P13805 278 aa23.44■■□□□ 1.34
RPUSD3-216ENST00000484134 PI4KAP1Q8N8J0 262 aa23.44■■□□□ 1.34
RPUSD3-216ENST00000484134 FEZ1Q99689 392 aa23.44■■□□□ 1.34
RPUSD3-216ENST00000484134 CTNNA3Q9UI47 895 aa23.44■■□□□ 1.34
RPUSD3-216ENST00000484134 PPP6R1Q9UPN7 881 aa23.44■■□□□ 1.34
RPUSD3-216ENST00000484134 TAF6LQ9Y6J9 622 aa23.44■■□□□ 1.34
RPUSD3-216ENST00000484134 RBM43Q6ZSC3 357 aaKnown RBP23.44■■□□□ 1.34
RPUSD3-216ENST00000484134 CACTINQ8WUQ7 758 aaKnown RBP23.44■■□□□ 1.34
RPUSD3-216ENST00000484134 FAM227BQ96M60 508 aa23.44■■□□□ 1.34
RPUSD3-216ENST00000484134 CCDC144BQ3MJ40 725 aa23.43■■□□□ 1.34
RPUSD3-216ENST00000484134 CCDC144CPQ8IYA2 1237 aa23.43■■□□□ 1.34
RPUSD3-216ENST00000484134 ECHDC1Q9NTX5 307 aa23.43■■□□□ 1.34
RPUSD3-216ENST00000484134 TDRD7Q8NHU6 1098 aaKnown RBP23.43■■□□□ 1.34
RPUSD3-216ENST00000484134 ANXA1P04083 346 aa23.42■■□□□ 1.34
RPUSD3-216ENST00000484134 ZKSCAN1P17029 563 aaPredicted RBP23.42■■□□□ 1.34
RPUSD3-216ENST00000484134 HSP90AB4PQ58FF6 505 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms