RNA–Protein interactions for RNA: ENST00000484061.5

TTC7A-209, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best)

Gene TTC7A, Length 3,085 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-209ENST00000484061 HS1BP3Q53T59 392 aa17.75■□□□□ 0.43
TTC7A-209ENST00000484061 PRAMEF22A3QJZ6 481 aa17.75■□□□□ 0.43
TTC7A-209ENST00000484061 FOXD4L6Q3SYB3 417 aaPredicted RBP17.74■□□□□ 0.43
TTC7A-209ENST00000484061 FOXD4L3Q6VB84 417 aaPredicted RBP17.74■□□□□ 0.43
TTC7A-209ENST00000484061 CWF19L2Q2TBE0 894 aaKnown RBP17.74■□□□□ 0.43
TTC7A-209ENST00000484061 RUFY3Q7L099 469 aa17.74■□□□□ 0.43
TTC7A-209ENST00000484061 ANKRD24Q8TF21 1146 aa17.74■□□□□ 0.43
TTC7A-209ENST00000484061 ECHDC1Q9NTX5 307 aa17.74■□□□□ 0.43
TTC7A-209ENST00000484061 PA2G4Q9UQ80 394 aaKnown RBP17.74■□□□□ 0.43
TTC7A-209ENST00000484061 GDPD2Q9HCC8 539 aa17.73■□□□□ 0.43
TTC7A-209ENST00000484061 ADAMTSL3P82987 1691 aa17.73■□□□□ 0.43
TTC7A-209ENST00000484061 GADD45BO75293 160 aaPredicted RBP17.73■□□□□ 0.43
TTC7A-209ENST00000484061 XPCQ01831 940 aaPredicted RBP17.73■□□□□ 0.43
TTC7A-209ENST00000484061 USP48Q86UV5 1035 aa17.73■□□□□ 0.43
TTC7A-209ENST00000484061 ORAI2Q96SN7 254 aa17.73■□□□□ 0.43
TTC7A-209ENST00000484061 DIAPH3Q9NSV4 1193 aa17.73■□□□□ 0.43
TTC7A-209ENST00000484061 LIMCH1Q9UPQ0 1083 aa17.73■□□□□ 0.43
TTC7A-209ENST00000484061 ADAMTS7Q9UKP4 1686 aa17.73■□□□□ 0.43
TTC7A-209ENST00000484061 MSNP26038 577 aaKnown RBP17.72■□□□□ 0.43
TTC7A-209ENST00000484061 ERC1Q8IUD2 1116 aa17.72■□□□□ 0.43
TTC7A-209ENST00000484061 PTH1RQ03431 593 aa17.72■□□□□ 0.43
TTC7A-209ENST00000484061 RUFY2Q8WXA3 655 aa17.72■□□□□ 0.43
TTC7A-209ENST00000484061 LARP6Q9BRS8 491 aaKnown RBP17.72■□□□□ 0.43
TTC7A-209ENST00000484061 SYAP1Q96A49 352 aaPredicted RBP17.71■□□□□ 0.43
TTC7A-209ENST00000484061 HYPKQ9NX55 129 aa17.71■□□□□ 0.43
TTC7A-209ENST00000484061 RGPD5Q99666 1765 aa17.71■□□□□ 0.43
TTC7A-209ENST00000484061 CASTP20810 708 aaKnown RBP17.71■□□□□ 0.43
TTC7A-209ENST00000484061 TMEM87AQ8NBN3 555 aa17.71■□□□□ 0.43
TTC7A-209ENST00000484061 GPATCH3Q96I76 525 aa17.71■□□□□ 0.43
TTC7A-209ENST00000484061 HDAC5Q9UQL6 1122 aa17.71■□□□□ 0.43
TTC7A-209ENST00000484061 TRPM3Q9HCF6 1732 aaPredicted RBP17.71■□□□□ 0.43
TTC7A-209ENST00000484061 IFIT2P09913 472 aaKnown RBP17.7■□□□□ 0.42
TTC7A-209ENST00000484061 CPA1P15085 419 aa17.7■□□□□ 0.42
TTC7A-209ENST00000484061 KAZALD1Q96I82 304 aa17.7■□□□□ 0.42
TTC7A-209ENST00000484061 NOL7Q9UMY1 257 aaKnown RBP17.7■□□□□ 0.42
TTC7A-209ENST00000484061 AXIN2Q9Y2T1 843 aa17.7■□□□□ 0.42
TTC7A-209ENST00000484061 UTYO14607 1347 aa17.7■□□□□ 0.42
TTC7A-209ENST00000484061 LMTK3Q96Q04 1460 aa17.7■□□□□ 0.42
TTC7A-209ENST00000484061 LINS1Q8NG48 757 aa17.7■□□□□ 0.42
TTC7A-209ENST00000484061 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.7■□□□□ 0.42
TTC7A-209ENST00000484061 ZSCAN22P10073 491 aaPredicted RBP17.7■□□□□ 0.42
TTC7A-209ENST00000484061 SUCLG2Q96I99 432 aa17.7■□□□□ 0.42
TTC7A-209ENST00000484061 TSPY26PQ9H489 355 aa17.7■□□□□ 0.42
TTC7A-209ENST00000484061 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.7■□□□□ 0.42
TTC7A-209ENST00000484061 GRM8O00222 908 aa17.69■□□□□ 0.42
TTC7A-209ENST00000484061 AACSQ86V21 672 aa17.69■□□□□ 0.42
TTC7A-209ENST00000484061 KCNB2Q92953 911 aa17.69■□□□□ 0.42
TTC7A-209ENST00000484061 EVI5LQ96CN4 794 aa17.69■□□□□ 0.42
TTC7A-209ENST00000484061 LARGE1O95461 756 aa17.69■□□□□ 0.42
TTC7A-209ENST00000484061 SYT1P21579 422 aa17.69■□□□□ 0.42
TTC7A-209ENST00000484061 RNF214Q8ND24 703 aa17.69■□□□□ 0.42
TTC7A-209ENST00000484061 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.69■□□□□ 0.42
TTC7A-209ENST00000484061 KDM4FA0A1W2PPD8 638 aa17.68■□□□□ 0.42
TTC7A-209ENST00000484061 STX6O43752 255 aa17.68■□□□□ 0.42
TTC7A-209ENST00000484061 ADCK5Q3MIX3 580 aa17.68■□□□□ 0.42
TTC7A-209ENST00000484061 BICC1Q9H694 974 aaKnown RBP17.68■□□□□ 0.42
TTC7A-209ENST00000484061 DDX21Q9NR30 783 aaKnown RBP eCLIP17.68■□□□□ 0.42
TTC7A-209ENST00000484061 SASH1O94885 1247 aa17.68■□□□□ 0.42
TTC7A-209ENST00000484061 PDIA6Q15084 440 aa17.68■□□□□ 0.42
TTC7A-209ENST00000484061 PRPF40BQ6NWY9 871 aaKnown RBP17.68■□□□□ 0.42
TTC7A-209ENST00000484061 VPS53Q5VIR6 699 aa17.68■□□□□ 0.42
TTC7A-209ENST00000484061 LMOD2Q6P5Q4 547 aa17.68■□□□□ 0.42
TTC7A-209ENST00000484061 ZSWIM6Q9HCJ5 1215 aa17.68■□□□□ 0.42
TTC7A-209ENST00000484061 SMC3Q9UQE7 1217 aa17.68■□□□□ 0.42
TTC7A-209ENST00000484061 CNPY2Q9Y2B0 182 aa17.68■□□□□ 0.42
TTC7A-209ENST00000484061 C5P01031 1676 aa17.67■□□□□ 0.42
TTC7A-209ENST00000484061 JAKMIP1Q96N16 626 aaKnown RBP17.67■□□□□ 0.42
TTC7A-209ENST00000484061 TM6SF1Q9BZW5 370 aa17.67■□□□□ 0.42
TTC7A-209ENST00000484061 OFD1O75665 1012 aa17.67■□□□□ 0.42
TTC7A-209ENST00000484061 PHF14O94880 888 aa17.67■□□□□ 0.42
TTC7A-209ENST00000484061 DDX58O95786 925 aaKnown RBP17.67■□□□□ 0.42
TTC7A-209ENST00000484061 NECTIN1Q15223 517 aa17.67■□□□□ 0.42
TTC7A-209ENST00000484061 AIMP1Q12904 312 aaKnown RBP17.66■□□□□ 0.42
TTC7A-209ENST00000484061 EAF2Q96CJ1 260 aaPredicted RBP17.66■□□□□ 0.42
TTC7A-209ENST00000484061 PDRG1Q9NUG6 133 aa17.66■□□□□ 0.42
TTC7A-209ENST00000484061 CCDC171Q6TFL3 1326 aa17.66■□□□□ 0.42
TTC7A-209ENST00000484061 F13A1P00488 732 aa17.66■□□□□ 0.42
TTC7A-209ENST00000484061 SCN11AQ9UI33 1791 aa17.66■□□□□ 0.42
TTC7A-209ENST00000484061 ZNF500O60304 480 aaPredicted RBP17.65■□□□□ 0.42
TTC7A-209ENST00000484061 CCDC83Q8IWF9 413 aa17.65■□□□□ 0.42
TTC7A-209ENST00000484061 IGKV5-2P06315 115 aa17.65■□□□□ 0.42
TTC7A-209ENST00000484061 G3BP1Q13283 466 aaKnown RBP eCLIP17.65■□□□□ 0.42
TTC7A-209ENST00000484061 ZKSCAN5Q9Y2L8 839 aa17.65■□□□□ 0.42
TTC7A-209ENST00000484061 CYP46A1Q9Y6A2 500 aa17.65■□□□□ 0.42
TTC7A-209ENST00000484061 NPHP4O75161 1426 aaPredicted RBP17.64■□□□□ 0.42
TTC7A-209ENST00000484061 FAM227BQ96M60 508 aa17.64■□□□□ 0.41
TTC7A-209ENST00000484061 CCDC8Q9H0W5 538 aaPredicted RBP17.64■□□□□ 0.41
TTC7A-209ENST00000484061 ERBB3P21860 1342 aa17.64■□□□□ 0.41
TTC7A-209ENST00000484061 GJB2P29033 226 aa17.64■□□□□ 0.41
TTC7A-209ENST00000484061 ZSCAN31Q96LW9 406 aaPredicted RBP17.64■□□□□ 0.41
TTC7A-209ENST00000484061 TLR7Q9NYK1 1049 aaKnown RBP17.64■□□□□ 0.41
TTC7A-209ENST00000484061 RBM8AQ9Y5S9 174 aaKnown RBP17.64■□□□□ 0.41
TTC7A-209ENST00000484061 ST3GAL1Q11201 340 aa17.63■□□□□ 0.41
TTC7A-209ENST00000484061 NMIQ13287 307 aaPredicted RBP17.63■□□□□ 0.41
TTC7A-209ENST00000484061 KRT28Q7Z3Y7 464 aa17.63■□□□□ 0.41
TTC7A-209ENST00000484061 SH2B1Q9NRF2 756 aaPredicted RBP17.63■□□□□ 0.41
TTC7A-209ENST00000484061 CCDC39Q9UFE4 941 aa17.63■□□□□ 0.41
TTC7A-209ENST00000484061 HIP1O00291 1037 aa17.63■□□□□ 0.41
TTC7A-209ENST00000484061 CCDC183Q5T5S1 534 aa17.63■□□□□ 0.41
TTC7A-209ENST00000484061 CREB3L3Q68CJ9 461 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms