RNA–Protein interactions for RNA: ENST00000483962.1

SNED1-210, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 2

Gene SNED1, Length 938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-210ENST00000483962 SRCAPQ6ZRS2 3230 aa25.06■■□□□ 1.6
SNED1-210ENST00000483962 AIMP1Q12904 312 aaKnown RBP25.06■■□□□ 1.6
SNED1-210ENST00000483962 NUP98P52948 1817 aa25.06■■□□□ 1.6
SNED1-210ENST00000483962 MAP3K15Q6ZN16 1313 aa25.06■■□□□ 1.6
SNED1-210ENST00000483962 CACNA1FO60840 1977 aa25.05■■□□□ 1.6
SNED1-210ENST00000483962 MMP10P09238 476 aa25.05■■□□□ 1.6
SNED1-210ENST00000483962 TM4SF1P30408 202 aa25.05■■□□□ 1.6
SNED1-210ENST00000483962 HLFQ16534 295 aa25.05■■□□□ 1.6
SNED1-210ENST00000483962 KIF6Q6ZMV9 814 aa25.05■■□□□ 1.6
SNED1-210ENST00000483962 PHAXQ9H814 394 aaKnown RBP25.05■■□□□ 1.6
SNED1-210ENST00000483962 POLD1P28340 1107 aa25.04■■□□□ 1.6
SNED1-210ENST00000483962 STK31Q9BXU1 1019 aa25.04■■□□□ 1.6
SNED1-210ENST00000483962 ZBTB3Q9H5J0 574 aa25.04■■□□□ 1.6
SNED1-210ENST00000483962 ERVV-1B6SEH8 477 aa25.03■■□□□ 1.6
SNED1-210ENST00000483962 NFIXQ14938 502 aa25.03■■□□□ 1.6
SNED1-210ENST00000483962 TBC1D9BQ66K14 1250 aa25.03■■□□□ 1.6
SNED1-210ENST00000483962 SLC4A2P04920 1241 aa25.02■■□□□ 1.6
SNED1-210ENST00000483962 DDR1Q08345 913 aa25.02■■□□□ 1.6
SNED1-210ENST00000483962 CLEC4GQ6UXB4 293 aa25.02■■□□□ 1.6
SNED1-210ENST00000483962 RGL2O15211 777 aa25.01■■□□□ 1.59
SNED1-210ENST00000483962 BICDL1Q6ZP65 573 aa25.01■■□□□ 1.59
SNED1-210ENST00000483962 G2E3Q7L622 706 aa25.01■■□□□ 1.59
SNED1-210ENST00000483962 ZNF652Q9Y2D9 606 aa25■■□□□ 1.59
SNED1-210ENST00000483962 POLRMTO00411 1230 aaKnown RBP24.99■■□□□ 1.59
SNED1-210ENST00000483962 AFDNP55196 1824 aaKnown RBP24.99■■□□□ 1.59
SNED1-210ENST00000483962 GIGYF2Q6Y7W6 1299 aaKnown RBP24.99■■□□□ 1.59
SNED1-210ENST00000483962 ANKRD13DQ6ZTN6 518 aa24.98■■□□□ 1.59
SNED1-210ENST00000483962 PLBD2Q8NHP8 589 aa24.98■■□□□ 1.59
SNED1-210ENST00000483962 YTHDC1Q96MU7 727 aaKnown RBP24.98■■□□□ 1.59
SNED1-210ENST00000483962 PPP1R1BQ9UD71 204 aaPredicted RBP24.98■■□□□ 1.59
SNED1-210ENST00000483962 PARP3Q9Y6F1 533 aa24.98■■□□□ 1.59
SNED1-210ENST00000483962 ARFGEF2Q9Y6D5 1785 aa24.98■■□□□ 1.59
SNED1-210ENST00000483962 ANKRD36CQ5JPF3 1778 aa24.97■■□□□ 1.59
SNED1-210ENST00000483962 NRXN2Q9P2S2 1712 aa24.96■■□□□ 1.59
SNED1-210ENST00000483962 CT47B1P0C2W7 299 aaPredicted RBP24.96■■□□□ 1.59
SNED1-210ENST00000483962 ATP10DQ9P241 1426 aa24.95■■□□□ 1.59
SNED1-210ENST00000483962 SSH1Q8WYL5 1049 aa24.95■■□□□ 1.58
SNED1-210ENST00000483962 ZNF428Q96B54 188 aa24.95■■□□□ 1.58
SNED1-210ENST00000483962 SETDB2Q96T68 719 aa24.95■■□□□ 1.58
SNED1-210ENST00000483962 NIP7Q9Y221 180 aaKnown RBP eCLIP24.95■■□□□ 1.58
SNED1-210ENST00000483962 SERPINB2P05120 415 aa24.94■■□□□ 1.58
SNED1-210ENST00000483962 FLIIQ13045 1269 aa24.94■■□□□ 1.58
SNED1-210ENST00000483962 MRPL50Q8N5N7 158 aaKnown RBP24.94■■□□□ 1.58
SNED1-210ENST00000483962 GPTP24298 496 aa24.93■■□□□ 1.58
SNED1-210ENST00000483962 ZNF34Q8IZ26 560 aa24.93■■□□□ 1.58
SNED1-210ENST00000483962 CARMIL3Q8ND23 1372 aa24.93■■□□□ 1.58
SNED1-210ENST00000483962 UBN2Q6ZU65 1347 aa24.92■■□□□ 1.58
SNED1-210ENST00000483962 TCIRG1Q13488 830 aa24.92■■□□□ 1.58
SNED1-210ENST00000483962 ALDH1L2Q3SY69 923 aa24.92■■□□□ 1.58
SNED1-210ENST00000483962 RIC3Q7Z5B4 369 aa24.92■■□□□ 1.58
SNED1-210ENST00000483962 BCL2L13Q9BXK5 485 aa24.92■■□□□ 1.58
SNED1-210ENST00000483962 FHDC1Q9C0D6 1143 aaPredicted RBP24.92■■□□□ 1.58
SNED1-210ENST00000483962 ADCY9O60503 1353 aa24.92■■□□□ 1.58
SNED1-210ENST00000483962 KIF13BQ9NQT8 1826 aa24.91■■□□□ 1.58
SNED1-210ENST00000483962 DDX58O95786 925 aaKnown RBP24.91■■□□□ 1.58
SNED1-210ENST00000483962 PI4KAP2A4QPH2 592 aa24.9■■□□□ 1.58
SNED1-210ENST00000483962 RARSP54136 660 aaKnown RBP24.9■■□□□ 1.58
SNED1-210ENST00000483962 HSP90AB3PQ58FF7 597 aa24.9■■□□□ 1.58
SNED1-210ENST00000483962 KSR2Q6VAB6 950 aa24.9■■□□□ 1.58
SNED1-210ENST00000483962 PI4KAP1Q8N8J0 262 aa24.9■■□□□ 1.58
SNED1-210ENST00000483962 C10orf71Q711Q0 1435 aa24.89■■□□□ 1.58
SNED1-210ENST00000483962 FKBP5Q13451 457 aaPredicted RBP24.89■■□□□ 1.58
SNED1-210ENST00000483962 KLHL34Q8N239 644 aa24.89■■□□□ 1.58
SNED1-210ENST00000483962 MAP3K2Q9Y2U5 619 aa24.89■■□□□ 1.58
SNED1-210ENST00000483962 FAM177BA6PVY3 158 aa24.88■■□□□ 1.57
SNED1-210ENST00000483962 SUSD4Q5VX71 490 aa24.88■■□□□ 1.57
SNED1-210ENST00000483962 PRR5LQ6MZQ0 368 aa24.88■■□□□ 1.57
SNED1-210ENST00000483962 ISCA1Q9BUE6 129 aa24.88■■□□□ 1.57
SNED1-210ENST00000483962 SMC4Q9NTJ3 1288 aa24.88■■□□□ 1.57
SNED1-210ENST00000483962 ATP5J2-PTCD1G3V325 749 aa24.87■■□□□ 1.57
SNED1-210ENST00000483962 NLRP10Q86W26 655 aa24.87■■□□□ 1.57
SNED1-210ENST00000483962 NBPF5PQ86XG9 351 aaPredicted RBP24.87■■□□□ 1.57
SNED1-210ENST00000483962 SYT17Q9BSW7 474 aa24.87■■□□□ 1.57
SNED1-210ENST00000483962 METTL22Q9BUU2 404 aaPredicted RBP24.87■■□□□ 1.57
SNED1-210ENST00000483962 CD2APQ9Y5K6 639 aa24.87■■□□□ 1.57
SNED1-210ENST00000483962 ANKRD31Q8N7Z5 1873 aa24.86■■□□□ 1.57
SNED1-210ENST00000483962 PARP10Q53GL7 1025 aa24.86■■□□□ 1.57
SNED1-210ENST00000483962 CCDC24Q8N4L8 307 aa24.86■■□□□ 1.57
SNED1-210ENST00000483962 MYD88Q99836 296 aa24.86■■□□□ 1.57
SNED1-210ENST00000483962 CNBD1Q8NA66 436 aa24.85■■□□□ 1.57
SNED1-210ENST00000483962 NLGN2Q8NFZ4 835 aa24.85■■□□□ 1.57
SNED1-210ENST00000483962 KIAA1551Q9HCM1 1747 aa24.85■■□□□ 1.57
SNED1-210ENST00000483962 F6X3S4 739 aa24.84■■□□□ 1.57
SNED1-210ENST00000483962 NTSR2O95665 410 aa24.84■■□□□ 1.57
SNED1-210ENST00000483962 BRPF1P55201 1214 aaPredicted RBP24.84■■□□□ 1.57
SNED1-210ENST00000483962 TRIM28Q13263 835 aaKnown RBP24.84■■□□□ 1.57
SNED1-210ENST00000483962 IBTKQ9P2D0 1353 aaPredicted RBP24.83■■□□□ 1.57
SNED1-210ENST00000483962 TPTE2Q6XPS3 522 aa24.83■■□□□ 1.57
SNED1-210ENST00000483962 DNAAF4Q8WXU2 420 aa24.83■■□□□ 1.57
SNED1-210ENST00000483962 N4BP2Q86UW6 1770 aaPredicted RBP24.82■■□□□ 1.56
SNED1-210ENST00000483962 BCAR3O75815 825 aa24.82■■□□□ 1.56
SNED1-210ENST00000483962 IGKV5-2P06315 115 aa24.82■■□□□ 1.56
SNED1-210ENST00000483962 PPP1R42Q7Z4L9 355 aa24.82■■□□□ 1.56
SNED1-210ENST00000483962 NUTM1Q86Y26 1132 aa24.82■■□□□ 1.56
SNED1-210ENST00000483962 NYXQ9GZU5 481 aa24.82■■□□□ 1.56
SNED1-210ENST00000483962 NPHP1O15259 732 aa24.81■■□□□ 1.56
SNED1-210ENST00000483962 ERFEQ4G0M1 354 aa24.81■■□□□ 1.56
SNED1-210ENST00000483962 UTP14AQ9BVJ6 771 aaKnown RBP24.81■■□□□ 1.56
SNED1-210ENST00000483962 PTPRCP08575 1304 aa24.81■■□□□ 1.56
SNED1-210ENST00000483962 NOB1Q9ULX3 412 aaKnown RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms