RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 OLFM4Q6UX06 510 aa17.44■□□□□ 0.38
UBR4-213ENST00000483922 SETDB2Q96T68 719 aa17.44■□□□□ 0.38
UBR4-213ENST00000483922 TAOK3Q9H2K8 898 aa17.44■□□□□ 0.38
UBR4-213ENST00000483922 PASKQ96RG2 1323 aa17.44■□□□□ 0.38
UBR4-213ENST00000483922 TEFQ10587 303 aa17.43■□□□□ 0.38
UBR4-213ENST00000483922 FOXN1O15353 648 aa17.42■□□□□ 0.38
UBR4-213ENST00000483922 ITGBL1O95965 494 aaPredicted RBP17.42■□□□□ 0.38
UBR4-213ENST00000483922 DZIP3Q86Y13 1208 aaKnown RBP17.42■□□□□ 0.38
UBR4-213ENST00000483922 CNBD1Q8NA66 436 aa17.42■□□□□ 0.38
UBR4-213ENST00000483922 CNKSR1Q969H4 720 aa17.42■□□□□ 0.38
UBR4-213ENST00000483922 MASTLQ96GX5 879 aa17.42■□□□□ 0.38
UBR4-213ENST00000483922 FMNL2Q96PY5 1086 aa17.42■□□□□ 0.38
UBR4-213ENST00000483922 KLRG2A4D1S0 409 aaPredicted RBP17.41■□□□□ 0.38
UBR4-213ENST00000483922 U2SURPO15042 1029 aaKnown RBP17.41■□□□□ 0.38
UBR4-213ENST00000483922 CNGB1Q14028 1251 aaPredicted RBP17.41■□□□□ 0.38
UBR4-213ENST00000483922 TAF1DQ9H5J8 278 aaPredicted RBP17.41■□□□□ 0.38
UBR4-213ENST00000483922 BTBD11A6QL63 1104 aa17.4■□□□□ 0.38
UBR4-213ENST00000483922 NBPF26B4DH59 902 aa17.4■□□□□ 0.38
UBR4-213ENST00000483922 NBPF10Q6P3W6 841 aaKnown RBP17.4■□□□□ 0.38
UBR4-213ENST00000483922 NBPF15Q8N660 670 aa17.4■□□□□ 0.38
UBR4-213ENST00000483922 GAS2L2Q8NHY3 880 aa17.4■□□□□ 0.38
UBR4-213ENST00000483922 L3MBTL3Q96JM7 780 aaPredicted RBP17.4■□□□□ 0.38
UBR4-213ENST00000483922 CNTNAP1P78357 1384 aa17.4■□□□□ 0.38
UBR4-213ENST00000483922 CACNA1SQ13698 1873 aa17.39■□□□□ 0.38
UBR4-213ENST00000483922 ZNF541Q9H0D2 1346 aa17.39■□□□□ 0.37
UBR4-213ENST00000483922 BCORQ6W2J9 1755 aa17.38■□□□□ 0.37
UBR4-213ENST00000483922 ARFGEF2Q9Y6D5 1785 aa17.38■□□□□ 0.37
UBR4-213ENST00000483922 VEGFBP49765 207 aa17.38■□□□□ 0.37
UBR4-213ENST00000483922 ST5P78524 1137 aa17.38■□□□□ 0.37
UBR4-213ENST00000483922 RSPH6AQ9H0K4 717 aa17.38■□□□□ 0.37
UBR4-213ENST00000483922 ZNF277Q9NRM2 450 aaPredicted RBP17.38■□□□□ 0.37
UBR4-213ENST00000483922 LDHDQ86WU2 507 aa17.37■□□□□ 0.37
UBR4-213ENST00000483922 PRKAR2BP31323 418 aa17.36■□□□□ 0.37
UBR4-213ENST00000483922 HLFQ16534 295 aa17.36■□□□□ 0.37
UBR4-213ENST00000483922 CLEC4GQ6UXB4 293 aa17.36■□□□□ 0.37
UBR4-213ENST00000483922 SLC51AQ86UW1 340 aa17.36■□□□□ 0.37
UBR4-213ENST00000483922 NBPF5PQ86XG9 351 aaPredicted RBP17.36■□□□□ 0.37
UBR4-213ENST00000483922 NPR1P16066 1061 aa17.35■□□□□ 0.37
UBR4-213ENST00000483922 FKBP4Q02790 459 aaKnown RBP eCLIP17.35■□□□□ 0.37
UBR4-213ENST00000483922 SOGA3Q5TF21 947 aa17.35■□□□□ 0.37
UBR4-213ENST00000483922 MCM10Q7L590 875 aa17.35■□□□□ 0.37
UBR4-213ENST00000483922 NPC1L1Q9UHC9 1359 aa17.35■□□□□ 0.37
UBR4-213ENST00000483922 SNED1Q8TER0 1413 aa17.35■□□□□ 0.37
UBR4-213ENST00000483922 ADAMTSL1Q8N6G6 1762 aa17.35■□□□□ 0.37
UBR4-213ENST00000483922 IQCA1LA6NCM1 817 aa17.34■□□□□ 0.37
UBR4-213ENST00000483922 DCTN1Q14203 1278 aa17.34■□□□□ 0.37
UBR4-213ENST00000483922 CCDC93Q567U6 631 aa17.34■□□□□ 0.37
UBR4-213ENST00000483922 SCN4AP35499 1836 aa17.33■□□□□ 0.37
UBR4-213ENST00000483922 TMEM88BA6NKF7 163 aa17.33■□□□□ 0.36
UBR4-213ENST00000483922 FAM177BA6PVY3 158 aa17.33■□□□□ 0.36
UBR4-213ENST00000483922 FZD9O00144 591 aa17.33■□□□□ 0.36
UBR4-213ENST00000483922 NPHP1O15259 732 aa17.33■□□□□ 0.36
UBR4-213ENST00000483922 EAPPQ56P03 285 aaPredicted RBP17.33■□□□□ 0.36
UBR4-213ENST00000483922 PRDM10Q9NQV6 1147 aa17.33■□□□□ 0.36
UBR4-213ENST00000483922 WBP1LQ9NX94 342 aa17.33■□□□□ 0.36
UBR4-213ENST00000483922 COL4A5P29400 1685 aa17.32■□□□□ 0.36
UBR4-213ENST00000483922 SNRPA1P09661 255 aaKnown RBP17.32■□□□□ 0.36
UBR4-213ENST00000483922 FMR1Q06787 632 aaKnown RBP eCLIP17.32■□□□□ 0.362e-6■■□□□ 13.6
UBR4-213ENST00000483922 TPTE2Q6XPS3 522 aa17.32■□□□□ 0.36
UBR4-213ENST00000483922 SYNE4Q8N205 404 aa17.32■□□□□ 0.36
UBR4-213ENST00000483922 CCER1Q8TC90 406 aaPredicted RBP17.32■□□□□ 0.36
UBR4-213ENST00000483922 NIP7Q9Y221 180 aaKnown RBP eCLIP17.32■□□□□ 0.36
UBR4-213ENST00000483922 RNF123Q5XPI4 1314 aa17.31■□□□□ 0.36
UBR4-213ENST00000483922 EPHX2P34913 555 aa17.31■□□□□ 0.36
UBR4-213ENST00000483922 MAP1SQ66K74 1059 aaPredicted RBP17.31■□□□□ 0.36
UBR4-213ENST00000483922 CNTROBQ8N137 903 aa17.31■□□□□ 0.36
UBR4-213ENST00000483922 MIS18AQ9NYP9 233 aa17.31■□□□□ 0.36
UBR4-213ENST00000483922 HACL1Q9UJ83 578 aa17.31■□□□□ 0.36
UBR4-213ENST00000483922 IARSP41252 1262 aaKnown RBP17.3■□□□□ 0.36
UBR4-213ENST00000483922 LBX1P52954 281 aa17.3■□□□□ 0.36
UBR4-213ENST00000483922 NPM2Q86SE8 214 aaKnown RBP17.3■□□□□ 0.36
UBR4-213ENST00000483922 CLEC11AQ9Y240 323 aa17.3■□□□□ 0.36
UBR4-213ENST00000483922 RASSF10A6NK89 507 aa17.29■□□□□ 0.36
UBR4-213ENST00000483922 RTKN2Q8IZC4 609 aa17.29■□□□□ 0.36
UBR4-213ENST00000483922 LTBP1Q14766 1721 aa17.29■□□□□ 0.36
UBR4-213ENST00000483922 RGL2O15211 777 aa17.28■□□□□ 0.36
UBR4-213ENST00000483922 CTCFP49711 727 aaPredicted RBP17.28■□□□□ 0.36
UBR4-213ENST00000483922 CRY2Q49AN0 593 aa17.28■□□□□ 0.36
UBR4-213ENST00000483922 ABCC12Q96J65 1359 aa17.28■□□□□ 0.36
UBR4-213ENST00000483922 HSPA8P11142 646 aaKnown RBP17.27■□□□□ 0.36
UBR4-213ENST00000483922 ALDH1B1P30837 517 aa17.27■□□□□ 0.36
UBR4-213ENST00000483922 DEFB115Q30KQ5 88 aa17.27■□□□□ 0.36
UBR4-213ENST00000483922 NUTM1Q86Y26 1132 aa17.27■□□□□ 0.36
UBR4-213ENST00000483922 ZNF652Q9Y2D9 606 aa17.27■□□□□ 0.36
UBR4-213ENST00000483922 GPC2Q8N158 579 aa17.26■□□□□ 0.35
UBR4-213ENST00000483922 PSMD1Q99460 953 aa17.26■□□□□ 0.35
UBR4-213ENST00000483922 TTLL7Q6ZT98 887 aa17.25■□□□□ 0.35
UBR4-213ENST00000483922 WDR33Q9C0J8 1336 aaKnown RBP17.24■□□□□ 0.35
UBR4-213ENST00000483922 U2AF1L5P0DN76 240 aaPredicted RBP17.24■□□□□ 0.35
UBR4-213ENST00000483922 PPP2R1AP30153 589 aa17.24■□□□□ 0.35
UBR4-213ENST00000483922 EPS15P42566 896 aa17.24■□□□□ 0.35
UBR4-213ENST00000483922 SCNN1DP51172 638 aa17.24■□□□□ 0.35
UBR4-213ENST00000483922 U2AF1Q01081 240 aaKnown RBP eCLIP17.24■□□□□ 0.35
UBR4-213ENST00000483922 TAF7Q15545 349 aaPredicted RBP17.24■□□□□ 0.35
UBR4-213ENST00000483922 CST9Q5W186 159 aa17.24■□□□□ 0.35
UBR4-213ENST00000483922 C3orf67Q6ZVT6 689 aa17.24■□□□□ 0.35
UBR4-213ENST00000483922 PNMA8AQ86V59 439 aaPredicted RBP17.24■□□□□ 0.35
UBR4-213ENST00000483922 NGEFQ8N5V2 710 aa17.24■□□□□ 0.35
UBR4-213ENST00000483922 UBN2Q6ZU65 1347 aa17.23■□□□□ 0.35
UBR4-213ENST00000483922 HTATSF1O43719 755 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms