RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 LAMB4A4D0S4 1761 aa23.9■■□□□ 1.42
ATG4B-221ENST00000483778 TIAM2Q8IVF5 1701 aa23.9■■□□□ 1.42
ATG4B-221ENST00000483778 KDM2BQ8NHM5 1336 aa23.89■■□□□ 1.42
ATG4B-221ENST00000483778 CLEC4GQ6UXB4 293 aa23.89■■□□□ 1.41
ATG4B-221ENST00000483778 NGEFQ8N5V2 710 aa23.89■■□□□ 1.41
ATG4B-221ENST00000483778 SRGNP10124 158 aa23.88■■□□□ 1.41
ATG4B-221ENST00000483778 EIF4A1P60842 406 aaKnown RBP23.88■■□□□ 1.41
ATG4B-221ENST00000483778 TNRC6CQ9HCJ0 1690 aaKnown RBP23.88■■□□□ 1.41
ATG4B-221ENST00000483778 FAM177BA6PVY3 158 aa23.87■■□□□ 1.41
ATG4B-221ENST00000483778 DDX10Q13206 875 aaKnown RBP23.87■■□□□ 1.41
ATG4B-221ENST00000483778 NBPF5PQ86XG9 351 aaPredicted RBP23.87■■□□□ 1.41
ATG4B-221ENST00000483778 RBM46Q8TBY0 533 aaKnown RBP23.87■■□□□ 1.41
ATG4B-221ENST00000483778 ARFGEF2Q9Y6D5 1785 aa23.87■■□□□ 1.41
ATG4B-221ENST00000483778 NPHP1O15259 732 aa23.86■■□□□ 1.41
ATG4B-221ENST00000483778 HTRA3P83110 453 aa23.86■■□□□ 1.41
ATG4B-221ENST00000483778 DNAJC5GQ8N7S2 189 aa23.86■■□□□ 1.41
ATG4B-221ENST00000483778 NIP7Q9Y221 180 aaKnown RBP eCLIP23.86■■□□□ 1.41
ATG4B-221ENST00000483778 NEFMP07197 916 aa23.85■■□□□ 1.41
ATG4B-221ENST00000483778 ST5P78524 1137 aa23.85■■□□□ 1.41
ATG4B-221ENST00000483778 STYK1Q6J9G0 422 aa23.85■■□□□ 1.41
ATG4B-221ENST00000483778 PDZRN3Q9UPQ7 1066 aa23.85■■□□□ 1.41
ATG4B-221ENST00000483778 RRP7AQ9Y3A4 280 aaKnown RBP23.85■■□□□ 1.41
ATG4B-221ENST00000483778 GLTPD2A6NH11 291 aa23.84■■□□□ 1.41
ATG4B-221ENST00000483778 APLP1P51693 650 aa23.84■■□□□ 1.41
ATG4B-221ENST00000483778 PRPF40BQ6NWY9 871 aaKnown RBP23.84■■□□□ 1.41
ATG4B-221ENST00000483778 TTLL7Q6ZT98 887 aa23.84■■□□□ 1.41
ATG4B-221ENST00000483778 C16orf71Q8IYS4 520 aaPredicted RBP23.84■■□□□ 1.41
ATG4B-221ENST00000483778 POTECB2RU33 542 aa23.83■■□□□ 1.41
ATG4B-221ENST00000483778 PNISRQ8TF01 805 aaKnown RBP23.83■■□□□ 1.41
ATG4B-221ENST00000483778 C7orf43Q8WVR3 580 aa23.83■■□□□ 1.41
ATG4B-221ENST00000483778 MASTLQ96GX5 879 aa23.83■■□□□ 1.41
ATG4B-221ENST00000483778 ZNF652Q9Y2D9 606 aa23.83■■□□□ 1.41
ATG4B-221ENST00000483778 OLFM4Q6UX06 510 aa23.82■■□□□ 1.4
ATG4B-221ENST00000483778 CNKSR1Q969H4 720 aa23.82■■□□□ 1.4
ATG4B-221ENST00000483778 WDR90Q96KV7 1748 aa23.81■■□□□ 1.4
ATG4B-221ENST00000483778 KLRG2A4D1S0 409 aaPredicted RBP23.81■■□□□ 1.4
ATG4B-221ENST00000483778 MYL6BP14649 208 aa23.81■■□□□ 1.4
ATG4B-221ENST00000483778 MAPK8IP3Q9UPT6 1336 aa23.81■■□□□ 1.4
ATG4B-221ENST00000483778 ZC3H4Q9UPT8 1303 aaKnown RBP23.81■■□□□ 1.4
ATG4B-221ENST00000483778 RIPK4P57078 832 aa23.8■■□□□ 1.4
ATG4B-221ENST00000483778 RALBP1Q15311 655 aa23.8■■□□□ 1.4
ATG4B-221ENST00000483778 TPTE2Q6XPS3 522 aa23.8■■□□□ 1.4
ATG4B-221ENST00000483778 VEGFAP15692 232 aaPredicted RBP23.78■■□□□ 1.4
ATG4B-221ENST00000483778 TMPOP42166 694 aaKnown RBP23.78■■□□□ 1.4
ATG4B-221ENST00000483778 FSTL1Q12841 308 aa23.78■■□□□ 1.4
ATG4B-221ENST00000483778 ERFEQ4G0M1 354 aa23.78■■□□□ 1.4
ATG4B-221ENST00000483778 PNNQ9H307 717 aaKnown RBP23.78■■□□□ 1.4
ATG4B-221ENST00000483778 RGL2O15211 777 aa23.77■■□□□ 1.4
ATG4B-221ENST00000483778 NPR1P16066 1061 aa23.77■■□□□ 1.4
ATG4B-221ENST00000483778 NUTM1Q86Y26 1132 aa23.77■■□□□ 1.4
ATG4B-221ENST00000483778 CCDC146Q8IYE0 955 aa23.77■■□□□ 1.4
ATG4B-221ENST00000483778 MAP3K15Q6ZN16 1313 aa23.77■■□□□ 1.4
ATG4B-221ENST00000483778 LTBP3Q9NS15 1303 aa23.77■■□□□ 1.4
ATG4B-221ENST00000483778 ERVV-1B6SEH8 477 aa23.76■■□□□ 1.39
ATG4B-221ENST00000483778 TAOK3Q9H2K8 898 aa23.76■■□□□ 1.39
ATG4B-221ENST00000483778 ZBTB3Q9H5J0 574 aa23.76■■□□□ 1.39
ATG4B-221ENST00000483778 TSPYL4Q9UJ04 414 aa23.76■■□□□ 1.39
ATG4B-221ENST00000483778 GPTP24298 496 aa23.75■■□□□ 1.39
ATG4B-221ENST00000483778 PDIA6Q15084 440 aa23.75■■□□□ 1.39
ATG4B-221ENST00000483778 ABCC12Q96J65 1359 aa23.75■■□□□ 1.39
ATG4B-221ENST00000483778 ANXA1P04083 346 aa23.74■■□□□ 1.39
ATG4B-221ENST00000483778 PROSER3Q2NL68 480 aa23.74■■□□□ 1.39
ATG4B-221ENST00000483778 LRP10Q7Z4F1 713 aa23.74■■□□□ 1.39
ATG4B-221ENST00000483778 UBN2Q6ZU65 1347 aa23.74■■□□□ 1.39
ATG4B-221ENST00000483778 DDNO94850 711 aaPredicted RBP23.73■■□□□ 1.39
ATG4B-221ENST00000483778 EIF2S2P20042 333 aaKnown RBP23.73■■□□□ 1.39
ATG4B-221ENST00000483778 NEUROD2Q15784 382 aa23.73■■□□□ 1.39
ATG4B-221ENST00000483778 SUSD4Q5VX71 490 aa23.73■■□□□ 1.39
ATG4B-221ENST00000483778 SLC51AQ86UW1 340 aa23.73■■□□□ 1.39
ATG4B-221ENST00000483778 SMC1BQ8NDV3 1235 aa23.73■■□□□ 1.39
ATG4B-221ENST00000483778 GTF2E1P29083 439 aaPredicted RBP23.72■■□□□ 1.39
ATG4B-221ENST00000483778 DPY19L2Q6NUT2 758 aa23.72■■□□□ 1.39
ATG4B-221ENST00000483778 MYBBP1AQ9BQG0 1328 aaKnown RBP23.72■■□□□ 1.39
ATG4B-221ENST00000483778 KRT24Q2M2I5 525 aa23.71■■□□□ 1.39
ATG4B-221ENST00000483778 KIF6Q6ZMV9 814 aa23.71■■□□□ 1.39
ATG4B-221ENST00000483778 ZNF34Q8IZ26 560 aa23.71■■□□□ 1.39
ATG4B-221ENST00000483778 NECTIN2Q92692 538 aa23.71■■□□□ 1.39
ATG4B-221ENST00000483778 ZNF277Q9NRM2 450 aaPredicted RBP23.71■■□□□ 1.39
ATG4B-221ENST00000483778 C3orf67Q6ZVT6 689 aa23.7■■□□□ 1.38
ATG4B-221ENST00000483778 TRIM35Q9UPQ4 493 aa23.7■■□□□ 1.38
ATG4B-221ENST00000483778 POTEIP0CG38 1075 aa23.69■■□□□ 1.38
ATG4B-221ENST00000483778 POTEJP0CG39 1038 aa23.69■■□□□ 1.38
ATG4B-221ENST00000483778 CRY2Q49AN0 593 aa23.69■■□□□ 1.38
ATG4B-221ENST00000483778 CCDC93Q567U6 631 aa23.69■■□□□ 1.38
ATG4B-221ENST00000483778 SOGA3Q5TF21 947 aa23.69■■□□□ 1.38
ATG4B-221ENST00000483778 GIGYF2Q6Y7W6 1299 aaKnown RBP23.68■■□□□ 1.38
ATG4B-221ENST00000483778 ADAMTS8Q9UP79 889 aa23.68■■□□□ 1.38
ATG4B-221ENST00000483778 FKBP4Q02790 459 aaKnown RBP eCLIP23.67■■□□□ 1.38
ATG4B-221ENST00000483778 NYXQ9GZU5 481 aa23.67■■□□□ 1.38
ATG4B-221ENST00000483778 ERBB4Q15303 1308 aa23.66■■□□□ 1.38
ATG4B-221ENST00000483778 NTSR2O95665 410 aa23.66■■□□□ 1.38
ATG4B-221ENST00000483778 ALDH1B1P30837 517 aa23.66■■□□□ 1.38
ATG4B-221ENST00000483778 SYNE4Q8N205 404 aa23.66■■□□□ 1.38
ATG4B-221ENST00000483778 KLRG1Q96E93 195 aa23.66■■□□□ 1.38
ATG4B-221ENST00000483778 SNED1Q8TER0 1413 aa23.66■■□□□ 1.38
ATG4B-221ENST00000483778 CHL1O00533 1208 aa23.65■■□□□ 1.38
ATG4B-221ENST00000483778 RUNDC1Q96C34 613 aa23.65■■□□□ 1.38
ATG4B-221ENST00000483778 BABAM1Q9NWV8 329 aa23.65■■□□□ 1.38
ATG4B-221ENST00000483778 LAS1LQ9Y4W2 734 aaKnown RBP23.65■■□□□ 1.38
ATG4B-221ENST00000483778 TAF1P21675 1872 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms