RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 ZNF330Q9Y3S2 320 aaPredicted RBP21.58■■□□□ 1.04
MRPL28-210ENST00000483764 BEND3Q5T5X7 828 aa21.57■■□□□ 1.04
MRPL28-210ENST00000483764 SRCIN1Q9C0H9 1055 aa21.57■■□□□ 1.04
MRPL28-210ENST00000483764 PDE4AP27815 886 aa21.56■■□□□ 1.04
MRPL28-210ENST00000483764 NPM2Q86SE8 214 aaKnown RBP21.55■■□□□ 1.04
MRPL28-210ENST00000483764 ATP10DQ9P241 1426 aa21.55■■□□□ 1.04
MRPL28-210ENST00000483764 EIF5P55010 431 aaKnown RBP21.55■■□□□ 1.04
MRPL28-210ENST00000483764 IPO9Q96P70 1041 aaKnown RBP21.55■■□□□ 1.04
MRPL28-210ENST00000483764 METTL22Q9BUU2 404 aaPredicted RBP21.55■■□□□ 1.04
MRPL28-210ENST00000483764 EP400Q96L91 3159 aa21.54■■□□□ 1.04
MRPL28-210ENST00000483764 MSH5O43196 834 aa21.54■■□□□ 1.04
MRPL28-210ENST00000483764 NEXNQ0ZGT2 675 aa21.54■■□□□ 1.04
MRPL28-210ENST00000483764 RC3H1Q5TC82 1133 aaKnown RBP21.54■■□□□ 1.04
MRPL28-210ENST00000483764 KIF6Q6ZMV9 814 aa21.54■■□□□ 1.04
MRPL28-210ENST00000483764 LINS1Q8NG48 757 aa21.54■■□□□ 1.04
MRPL28-210ENST00000483764 CNTNAP4Q9C0A0 1308 aa21.54■■□□□ 1.04
MRPL28-210ENST00000483764 LY75O60449 1722 aa21.53■■□□□ 1.04
MRPL28-210ENST00000483764 ALDH1L1O75891 902 aa21.53■■□□□ 1.04
MRPL28-210ENST00000483764 APBA3O96018 575 aa21.53■■□□□ 1.04
MRPL28-210ENST00000483764 SLC27A3Q5K4L6 730 aa21.53■■□□□ 1.04
MRPL28-210ENST00000483764 ARXQ96QS3 562 aa21.53■■□□□ 1.04
MRPL28-210ENST00000483764 ZBTB3Q9H5J0 574 aa21.53■■□□□ 1.04
MRPL28-210ENST00000483764 PLSCR1O15162 318 aa21.52■■□□□ 1.04
MRPL28-210ENST00000483764 MEIS3Q99687 375 aa21.52■■□□□ 1.04
MRPL28-210ENST00000483764 MYD88Q99836 296 aa21.52■■□□□ 1.04
MRPL28-210ENST00000483764 PCDHB15Q9Y5E8 787 aa21.52■■□□□ 1.04
MRPL28-210ENST00000483764 LRRC4BQ9NT99 713 aa21.51■■□□□ 1.03
MRPL28-210ENST00000483764 COL5A3P25940 1745 aaPredicted RBP21.51■■□□□ 1.03
MRPL28-210ENST00000483764 IGKV5-2P06315 115 aa21.5■■□□□ 1.03
MRPL28-210ENST00000483764 GNAI3P08754 354 aa21.5■■□□□ 1.03
MRPL28-210ENST00000483764 CWF19L2Q2TBE0 894 aaKnown RBP21.5■■□□□ 1.03
MRPL28-210ENST00000483764 USP44Q9H0E7 712 aa21.5■■□□□ 1.03
MRPL28-210ENST00000483764 NOP58Q9Y2X3 529 aaKnown RBP21.5■■□□□ 1.03
MRPL28-210ENST00000483764 RREB1Q92766 1687 aa21.5■■□□□ 1.03
MRPL28-210ENST00000483764 MAP3K15Q6ZN16 1313 aa21.5■■□□□ 1.03
MRPL28-210ENST00000483764 TXNRD1Q16881 649 aa21.5■■□□□ 1.03
MRPL28-210ENST00000483764 DZIP3Q86Y13 1208 aaKnown RBP21.5■■□□□ 1.03
MRPL28-210ENST00000483764 HMGB2P26583 209 aaKnown RBP21.49■■□□□ 1.03
MRPL28-210ENST00000483764 TBC1D2BQ9UPU7 963 aa21.49■■□□□ 1.03
MRPL28-210ENST00000483764 NEURL1BA8MQ27 555 aa21.48■■□□□ 1.03
MRPL28-210ENST00000483764 ERVV-1B6SEH8 477 aa21.48■■□□□ 1.03
MRPL28-210ENST00000483764 RPS6KA4O75676 772 aa21.48■■□□□ 1.03
MRPL28-210ENST00000483764 PROM2Q8N271 834 aa21.48■■□□□ 1.03
MRPL28-210ENST00000483764 C1orf115Q9H7X2 142 aa21.48■■□□□ 1.03
MRPL28-210ENST00000483764 MYH14Q7Z406 1995 aaKnown RBP21.47■■□□□ 1.03
MRPL28-210ENST00000483764 A0A087WZG4 1122 aa21.47■■□□□ 1.03
MRPL28-210ENST00000483764 ATP5J2-PTCD1G3V325 749 aa21.47■■□□□ 1.03
MRPL28-210ENST00000483764 DDRGK1Q96HY6 314 aa21.47■■□□□ 1.03
MRPL28-210ENST00000483764 N4BP2Q86UW6 1770 aaPredicted RBP21.47■■□□□ 1.03
MRPL28-210ENST00000483764 IBTKQ9P2D0 1353 aaPredicted RBP21.47■■□□□ 1.03
MRPL28-210ENST00000483764 GNPATO15228 680 aa21.46■■□□□ 1.03
MRPL28-210ENST00000483764 TCIRG1Q13488 830 aa21.46■■□□□ 1.03
MRPL28-210ENST00000483764 GIGYF2Q6Y7W6 1299 aaKnown RBP21.46■■□□□ 1.03
MRPL28-210ENST00000483764 C9orf78Q9NZ63 289 aaPredicted RBP21.46■■□□□ 1.03
MRPL28-210ENST00000483764 COL15A1P39059 1388 aa21.46■■□□□ 1.03
MRPL28-210ENST00000483764 GNAI2P04899 355 aa21.45■■□□□ 1.02
MRPL28-210ENST00000483764 UBTFL1P0CB47 393 aaPredicted RBP21.45■■□□□ 1.02
MRPL28-210ENST00000483764 GCKRQ14397 625 aa21.45■■□□□ 1.02
MRPL28-210ENST00000483764 HLFQ16534 295 aa21.45■■□□□ 1.02
MRPL28-210ENST00000483764 RTCBQ9Y3I0 505 aaKnown RBP21.45■■□□□ 1.02
MRPL28-210ENST00000483764 ARFGEF2Q9Y6D5 1785 aa21.45■■□□□ 1.02
MRPL28-210ENST00000483764 NBPF7P0C2Y1 421 aaPredicted RBP21.45■■□□□ 1.02
MRPL28-210ENST00000483764 FAM161AQ3B820 660 aa21.45■■□□□ 1.02
MRPL28-210ENST00000483764 AK7Q96M32 723 aa21.45■■□□□ 1.02
MRPL28-210ENST00000483764 RWDD1Q9H446 243 aaPredicted RBP21.45■■□□□ 1.02
MRPL28-210ENST00000483764 ZBTB47Q9UFB7 747 aaPredicted RBP21.45■■□□□ 1.02
MRPL28-210ENST00000483764 GRM8O00222 908 aa21.44■■□□□ 1.02
MRPL28-210ENST00000483764 IGHDP01880 384 aa21.44■■□□□ 1.02
MRPL28-210ENST00000483764 HSP90AB3PQ58FF7 597 aa21.44■■□□□ 1.02
MRPL28-210ENST00000483764 ISCA1Q9BUE6 129 aa21.44■■□□□ 1.02
MRPL28-210ENST00000483764 NUP188Q5SRE5 1749 aa21.43■■□□□ 1.02
MRPL28-210ENST00000483764 TRIM28Q13263 835 aaKnown RBP21.43■■□□□ 1.02
MRPL28-210ENST00000483764 CCDC191Q8NCU4 936 aa21.43■■□□□ 1.02
MRPL28-210ENST00000483764 UTYO14607 1347 aa21.42■■□□□ 1.02
MRPL28-210ENST00000483764 CAMTA2O94983 1202 aa21.42■■□□□ 1.02
MRPL28-210ENST00000483764 HDAC1Q13547 482 aaPredicted RBP21.42■■□□□ 1.02
MRPL28-210ENST00000483764 RPAP2Q8IXW5 612 aaPredicted RBP21.42■■□□□ 1.02
MRPL28-210ENST00000483764 CWC25Q9NXE8 425 aaPredicted RBP21.42■■□□□ 1.02
MRPL28-210ENST00000483764 HDAC5Q9UQL6 1122 aa21.42■■□□□ 1.02
MRPL28-210ENST00000483764 TAF1LQ8IZX4 1826 aa21.42■■□□□ 1.02
MRPL28-210ENST00000483764 C4BP0C0L5 1744 aa21.42■■□□□ 1.02
MRPL28-210ENST00000483764 LRRFIP2Q9Y608 721 aaKnown RBP21.41■■□□□ 1.02
MRPL28-210ENST00000483764 TNS1Q9HBL0 1735 aaKnown RBP21.41■■□□□ 1.02
MRPL28-210ENST00000483764 CEP85Q6P2H3 762 aa21.4■■□□□ 1.02
MRPL28-210ENST00000483764 SMIM5Q71RC9 77 aa21.4■■□□□ 1.02
MRPL28-210ENST00000483764 SIRT2Q8IXJ6 389 aa21.4■■□□□ 1.02
MRPL28-210ENST00000483764 ANKRD44Q8N8A2 993 aa21.4■■□□□ 1.02
MRPL28-210ENST00000483764 SF3B2Q13435 895 aaKnown RBP21.39■■□□□ 1.02
MRPL28-210ENST00000483764 TRAPPC3LQ5T215 181 aa21.39■■□□□ 1.02
MRPL28-210ENST00000483764 AMIGO3Q86WK7 504 aa21.39■■□□□ 1.02
MRPL28-210ENST00000483764 ARHGEF1Q92888 912 aaKnown RBP21.39■■□□□ 1.01
MRPL28-210ENST00000483764 NARFQ9UHQ1 456 aa21.39■■□□□ 1.01
MRPL28-210ENST00000483764 ZNF652Q9Y2D9 606 aa21.39■■□□□ 1.01
MRPL28-210ENST00000483764 RGL2O15211 777 aa21.38■■□□□ 1.01
MRPL28-210ENST00000483764 ADRA2BP18089 450 aa21.38■■□□□ 1.01
MRPL28-210ENST00000483764 GPTP24298 496 aa21.38■■□□□ 1.01
MRPL28-210ENST00000483764 CLEC4GQ6UXB4 293 aa21.38■■□□□ 1.01
MRPL28-210ENST00000483764 ZNF34Q8IZ26 560 aa21.38■■□□□ 1.01
MRPL28-210ENST00000483764 CAMKK2Q96RR4 588 aa21.38■■□□□ 1.01
MRPL28-210ENST00000483764 H7C1W4 665 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms