RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 KCPQ6ZWJ8 1503 aa14.62□□□□□ -0.07
SND1-210ENST00000483503 PLCH1Q4KWH8 1693 aa14.62□□□□□ -0.07
SND1-210ENST00000483503 ERC2O15083 957 aa14.62□□□□□ -0.07
SND1-210ENST00000483503 IGKV5-2P06315 115 aa14.62□□□□□ -0.07
SND1-210ENST00000483503 GLI3P10071 1580 aa14.62□□□□□ -0.07
SND1-210ENST00000483503 TOM1O60784 492 aa14.61□□□□□ -0.07
SND1-210ENST00000483503 G3BP1Q13283 466 aaKnown RBP eCLIP14.61□□□□□ -0.072e-8■■□□□ 11.5
SND1-210ENST00000483503 NBR1Q14596 966 aa14.61□□□□□ -0.07
SND1-210ENST00000483503 CLASRPQ8N2M8 674 aaKnown RBP14.61□□□□□ -0.07
SND1-210ENST00000483503 SUCLG2Q96I99 432 aa14.61□□□□□ -0.07
SND1-210ENST00000483503 THRAP3Q9Y2W1 955 aaKnown RBP14.61□□□□□ -0.07
SND1-210ENST00000483503 LRP6O75581 1613 aa14.61□□□□□ -0.07
SND1-210ENST00000483503 TTC41PQ6P2S7 1318 aa14.61□□□□□ -0.07
SND1-210ENST00000483503 USP42Q9H9J4 1324 aaKnown RBP14.61□□□□□ -0.07
SND1-210ENST00000483503 EXOC5O00471 708 aa14.6□□□□□ -0.07
SND1-210ENST00000483503 EPB41L2O43491 1005 aaKnown RBP14.6□□□□□ -0.07
SND1-210ENST00000483503 IL27Q8NEV9 243 aa14.6□□□□□ -0.07
SND1-210ENST00000483503 PHLPP1O60346 1717 aa14.6□□□□□ -0.07
SND1-210ENST00000483503 COL16A1Q07092 1604 aaPredicted RBP14.59□□□□□ -0.07
SND1-210ENST00000483503 TRIM6-TRIM34B2RNG4 842 aa14.59□□□□□ -0.07
SND1-210ENST00000483503 RABEP1Q15276 862 aa14.59□□□□□ -0.07
SND1-210ENST00000483503 USP26Q9BXU7 913 aa14.59□□□□□ -0.07
SND1-210ENST00000483503 BICC1Q9H694 974 aaKnown RBP14.59□□□□□ -0.07
SND1-210ENST00000483503 IL1RAPL2Q9NP60 686 aa14.59□□□□□ -0.07
SND1-210ENST00000483503 ARFGEF2Q9Y6D5 1785 aa14.58□□□□□ -0.08
SND1-210ENST00000483503 GLRX3O76003 335 aaKnown RBP14.58□□□□□ -0.08
SND1-210ENST00000483503 STARD3NLO95772 234 aa14.58□□□□□ -0.08
SND1-210ENST00000483503 MCCP23508 829 aa14.58□□□□□ -0.08
SND1-210ENST00000483503 NBPF26B4DH59 902 aa14.57□□□□□ -0.08
SND1-210ENST00000483503 PTCD1O75127 700 aaKnown RBP14.57□□□□□ -0.08
SND1-210ENST00000483503 IFIT2P09913 472 aaKnown RBP14.57□□□□□ -0.08
SND1-210ENST00000483503 NBPF14Q5TI25 921 aa14.57□□□□□ -0.08
SND1-210ENST00000483503 NBPF10Q6P3W6 841 aaKnown RBP14.57□□□□□ -0.08
SND1-210ENST00000483503 NUTM1Q86Y26 1132 aa14.57□□□□□ -0.08
SND1-210ENST00000483503 CNTROBQ8N137 903 aa14.57□□□□□ -0.08
SND1-210ENST00000483503 NBPF15Q8N660 670 aa14.57□□□□□ -0.08
SND1-210ENST00000483503 RILPL2Q969X0 211 aa14.57□□□□□ -0.08
SND1-210ENST00000483503 TOGARAM1Q9Y4F4 1720 aa14.57□□□□□ -0.08
SND1-210ENST00000483503 TUBGCP6Q96RT7 1819 aa14.57□□□□□ -0.08
SND1-210ENST00000483503 CCDC191Q8NCU4 936 aa14.56□□□□□ -0.08
SND1-210ENST00000483503 PIGBQ92521 554 aa14.56□□□□□ -0.08
SND1-210ENST00000483503 KAZALD1Q96I82 304 aa14.56□□□□□ -0.08
SND1-210ENST00000483503 ESYT1Q9BSJ8 1104 aa14.56□□□□□ -0.08
SND1-210ENST00000483503 CWC25Q9NXE8 425 aaPredicted RBP14.56□□□□□ -0.08
SND1-210ENST00000483503 AFDNP55196 1824 aaKnown RBP14.56□□□□□ -0.08
SND1-210ENST00000483503 WNK3Q9BYP7 1800 aa14.55□□□□□ -0.08
SND1-210ENST00000483503 A0A087WZG4 1122 aa14.55□□□□□ -0.08
SND1-210ENST00000483503 A1BGP04217 495 aa14.55□□□□□ -0.08
SND1-210ENST00000483503 CHMLP26374 656 aa14.55□□□□□ -0.08
SND1-210ENST00000483503 RABL6Q3YEC7 729 aaPredicted RBP14.55□□□□□ -0.08
SND1-210ENST00000483503 PI4K2BQ8TCG2 481 aa14.55□□□□□ -0.08
SND1-210ENST00000483503 KIF2CQ99661 725 aa14.55□□□□□ -0.08
SND1-210ENST00000483503 COPRSQ9NQ92 184 aa14.55□□□□□ -0.08
SND1-210ENST00000483503 ECHDC1Q9NTX5 307 aa14.55□□□□□ -0.08
SND1-210ENST00000483503 CHMP5Q9NZZ3 219 aa14.55□□□□□ -0.08
SND1-210ENST00000483503 H7C1W4 665 aa14.54□□□□□ -0.08
SND1-210ENST00000483503 NFKBIBQ15653 356 aa14.54□□□□□ -0.08
SND1-210ENST00000483503 KIF6Q6ZMV9 814 aa14.54□□□□□ -0.08
SND1-210ENST00000483503 ATG3Q9NT62 314 aa14.54□□□□□ -0.08
SND1-210ENST00000483503 BCL9O00512 1426 aa14.54□□□□□ -0.08
SND1-210ENST00000483503 NUP188Q5SRE5 1749 aa14.53□□□□□ -0.08
SND1-210ENST00000483503 SPATA31A1Q5TZJ5 1347 aa14.53□□□□□ -0.08
SND1-210ENST00000483503 K7ELQ4 463 aaPredicted RBP14.53□□□□□ -0.08
SND1-210ENST00000483503 PIP4K2AP48426 406 aaPredicted RBP14.53□□□□□ -0.08
SND1-210ENST00000483503 TSHZ3Q63HK5 1081 aa14.53□□□□□ -0.08
SND1-210ENST00000483503 UBE3BQ7Z3V4 1068 aa14.53□□□□□ -0.08
SND1-210ENST00000483503 RUFY2Q8WXA3 655 aa14.53□□□□□ -0.08
SND1-210ENST00000483503 SLKQ9H2G2 1235 aaPredicted RBP14.53□□□□□ -0.08
SND1-210ENST00000483503 ANTXR1Q9H6X2 564 aa14.53□□□□□ -0.08
SND1-210ENST00000483503 CIZ1Q9ULV3 898 aaPredicted RBP14.53□□□□□ -0.08
SND1-210ENST00000483503 PA2G4Q9UQ80 394 aaKnown RBP14.53□□□□□ -0.08
SND1-210ENST00000483503 ITGB4P16144 1822 aa14.52□□□□□ -0.08
SND1-210ENST00000483503 NWD2Q9ULI1 1742 aa14.52□□□□□ -0.08
SND1-210ENST00000483503 ATP5J2-PTCD1G3V325 749 aa14.52□□□□□ -0.09
SND1-210ENST00000483503 HIP1O00291 1037 aa14.52□□□□□ -0.09
SND1-210ENST00000483503 ST18O60284 1047 aa14.52□□□□□ -0.09
SND1-210ENST00000483503 CASP7P55210 303 aa14.52□□□□□ -0.09
SND1-210ENST00000483503 ANAPC15P60006 121 aa14.52□□□□□ -0.09
SND1-210ENST00000483503 TRIM28Q13263 835 aaKnown RBP14.52□□□□□ -0.09
SND1-210ENST00000483503 TTLL7Q6ZT98 887 aa14.52□□□□□ -0.09
SND1-210ENST00000483503 AACSQ86V21 672 aa14.52□□□□□ -0.09
SND1-210ENST00000483503 RBM42Q9BTD8 480 aaKnown RBP14.52□□□□□ -0.09
SND1-210ENST00000483503 ASAP1Q9ULH1 1129 aa14.52□□□□□ -0.09
SND1-210ENST00000483503 NRAPQ86VF7 1730 aa14.52□□□□□ -0.09
SND1-210ENST00000483503 AK9Q5TCS8 1911 aa14.51□□□□□ -0.09
SND1-210ENST00000483503 ADAMTS2O95450 1211 aa14.51□□□□□ -0.09
SND1-210ENST00000483503 DDB1Q16531 1140 aa14.51□□□□□ -0.09
SND1-210ENST00000483503 HSP90AB3PQ58FF7 597 aa14.51□□□□□ -0.09
SND1-210ENST00000483503 SPATA31A5Q5VU36 1347 aa14.5□□□□□ -0.09
SND1-210ENST00000483503 SPATA31A7Q8IWB4 1347 aa14.5□□□□□ -0.09
SND1-210ENST00000483503 SASH1O94885 1247 aa14.5□□□□□ -0.09
SND1-210ENST00000483503 HSP90AA1P07900 732 aaKnown RBP14.5□□□□□ -0.09
SND1-210ENST00000483503 TCIRG1Q13488 830 aa14.5□□□□□ -0.09
SND1-210ENST00000483503 EPHA10Q5JZY3 1008 aa14.5□□□□□ -0.09
SND1-210ENST00000483503 BARGINQ6ZT62 677 aa14.5□□□□□ -0.09
SND1-210ENST00000483503 DNAJC10Q8IXB1 793 aa14.5□□□□□ -0.09
SND1-210ENST00000483503 EVI5LQ96CN4 794 aa14.5□□□□□ -0.09
SND1-210ENST00000483503 ISCA1Q9BUE6 129 aa14.5□□□□□ -0.09
SND1-210ENST00000483503 RFX5P48382 616 aaPredicted RBP14.49□□□□□ -0.09
SND1-210ENST00000483503 MCM2P49736 904 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms