RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 BCL11AQ9H165 835 aa16.31■□□□□ 0.2
CPNE1-225ENST00000483495 NRAPQ86VF7 1730 aa16.3■□□□□ 0.2
CPNE1-225ENST00000483495 WNK3Q9BYP7 1800 aa16.3■□□□□ 0.2
CPNE1-225ENST00000483495 THRAP3Q9Y2W1 955 aaKnown RBP16.3■□□□□ 0.2
CPNE1-225ENST00000483495 ARFGEF2Q9Y6D5 1785 aa16.29■□□□□ 0.2
CPNE1-225ENST00000483495 PTCD1O75127 700 aaKnown RBP16.29■□□□□ 0.2
CPNE1-225ENST00000483495 CASC1Q6TDU7 716 aa16.29■□□□□ 0.2
CPNE1-225ENST00000483495 TBC1D2Q9BYX2 928 aa16.29■□□□□ 0.2
CPNE1-225ENST00000483495 BICC1Q9H694 974 aaKnown RBP16.29■□□□□ 0.2
CPNE1-225ENST00000483495 TUBGCP6Q96RT7 1819 aa16.29■□□□□ 0.2
CPNE1-225ENST00000483495 EXOC5O00471 708 aa16.29■□□□□ 0.2
CPNE1-225ENST00000483495 TEX13AQ9BXU3 409 aaPredicted RBP16.29■□□□□ 0.2
CPNE1-225ENST00000483495 IL1RAPL2Q9NP60 686 aa16.29■□□□□ 0.2
CPNE1-225ENST00000483495 BCL9O00512 1426 aa16.28■□□□□ 0.2
CPNE1-225ENST00000483495 SPATA31A1Q5TZJ5 1347 aa16.28■□□□□ 0.2
CPNE1-225ENST00000483495 USP42Q9H9J4 1324 aaKnown RBP16.28■□□□□ 0.2
CPNE1-225ENST00000483495 ERC1Q8IUD2 1116 aa16.28■□□□□ 0.2
CPNE1-225ENST00000483495 KIF2CQ99661 725 aa16.28■□□□□ 0.2
CPNE1-225ENST00000483495 ATG3Q9NT62 314 aa16.28■□□□□ 0.2
CPNE1-225ENST00000483495 A1BGP04217 495 aa16.27■□□□□ 0.2
CPNE1-225ENST00000483495 ASAP1Q9ULH1 1129 aa16.27■□□□□ 0.2
CPNE1-225ENST00000483495 ADAMTS2O95450 1211 aa16.27■□□□□ 0.19
CPNE1-225ENST00000483495 TSHZ3Q63HK5 1081 aa16.27■□□□□ 0.19
CPNE1-225ENST00000483495 NUP188Q5SRE5 1749 aa16.26■□□□□ 0.19
CPNE1-225ENST00000483495 CASP7P55210 303 aa16.26■□□□□ 0.19
CPNE1-225ENST00000483495 SNX21Q969T3 373 aa16.26■□□□□ 0.19
CPNE1-225ENST00000483495 ITGB4P16144 1822 aa16.26■□□□□ 0.19
CPNE1-225ENST00000483495 SLIT2O94813 1529 aa16.25■□□□□ 0.19
CPNE1-225ENST00000483495 RABL6Q3YEC7 729 aaPredicted RBP16.25■□□□□ 0.19
CPNE1-225ENST00000483495 TTLL7Q6ZT98 887 aa16.25■□□□□ 0.19
CPNE1-225ENST00000483495 PI4K2BQ8TCG2 481 aa16.25■□□□□ 0.19
CPNE1-225ENST00000483495 USP26Q9BXU7 913 aa16.25■□□□□ 0.19
CPNE1-225ENST00000483495 EPHA10Q5JZY3 1008 aa16.25■□□□□ 0.19
CPNE1-225ENST00000483495 NUTM1Q86Y26 1132 aa16.25■□□□□ 0.19
CPNE1-225ENST00000483495 PA2G4Q9UQ80 394 aaKnown RBP16.25■□□□□ 0.19
CPNE1-225ENST00000483495 NWD2Q9ULI1 1742 aa16.24■□□□□ 0.19
CPNE1-225ENST00000483495 SPATA31A5Q5VU36 1347 aa16.24■□□□□ 0.19
CPNE1-225ENST00000483495 TTC41PQ6P2S7 1318 aa16.24■□□□□ 0.19
CPNE1-225ENST00000483495 SPATA31A7Q8IWB4 1347 aa16.24■□□□□ 0.19
CPNE1-225ENST00000483495 OS9Q13438 667 aaPredicted RBP16.24■□□□□ 0.19
CPNE1-225ENST00000483495 A0A087WZG4 1122 aa16.23■□□□□ 0.19
CPNE1-225ENST00000483495 ATP5J2-PTCD1G3V325 749 aa16.23■□□□□ 0.19
CPNE1-225ENST00000483495 H7C1W4 665 aa16.23■□□□□ 0.19
CPNE1-225ENST00000483495 ERC2O15083 957 aa16.23■□□□□ 0.19
CPNE1-225ENST00000483495 REC8O95072 547 aa16.23■□□□□ 0.19
CPNE1-225ENST00000483495 PIP4K2BP78356 416 aa16.23■□□□□ 0.19
CPNE1-225ENST00000483495 CLASRPQ8N2M8 674 aaKnown RBP16.23■□□□□ 0.19
CPNE1-225ENST00000483495 AFDNP55196 1824 aaKnown RBP16.23■□□□□ 0.19
CPNE1-225ENST00000483495 BARGINQ6ZT62 677 aa16.22■□□□□ 0.19
CPNE1-225ENST00000483495 UBE3BQ7Z3V4 1068 aa16.22■□□□□ 0.19
CPNE1-225ENST00000483495 DNAJC10Q8IXB1 793 aa16.22■□□□□ 0.19
CPNE1-225ENST00000483495 STARD3NLO95772 234 aa16.22■□□□□ 0.19
CPNE1-225ENST00000483495 RFX5P48382 616 aaPredicted RBP16.22■□□□□ 0.19
CPNE1-225ENST00000483495 G3BP1Q13283 466 aaKnown RBP eCLIP16.22■□□□□ 0.191e-8■□□□□ 11.2
CPNE1-225ENST00000483495 CCDC191Q8NCU4 936 aa16.22■□□□□ 0.19
CPNE1-225ENST00000483495 COPRSQ9NQ92 184 aa16.22■□□□□ 0.19
CPNE1-225ENST00000483495 SASH1O94885 1247 aa16.21■□□□□ 0.19
CPNE1-225ENST00000483495 CHMLP26374 656 aa16.21■□□□□ 0.19
CPNE1-225ENST00000483495 ANTXR1Q9H6X2 564 aa16.21■□□□□ 0.19
CPNE1-225ENST00000483495 CWC25Q9NXE8 425 aaPredicted RBP16.21■□□□□ 0.19
CPNE1-225ENST00000483495 TRIM6-TRIM34B2RNG4 842 aa16.2■□□□□ 0.18
CPNE1-225ENST00000483495 NBR1Q14596 966 aa16.2■□□□□ 0.18
CPNE1-225ENST00000483495 DDB1Q16531 1140 aa16.2■□□□□ 0.18
CPNE1-225ENST00000483495 UNC5CLQ8IV45 518 aa16.2■□□□□ 0.18
CPNE1-225ENST00000483495 HSCBQ8IWL3 235 aa16.2■□□□□ 0.18
CPNE1-225ENST00000483495 SLC4A9Q96Q91 983 aa16.2■□□□□ 0.18
CPNE1-225ENST00000483495 ESYT1Q9BSJ8 1104 aa16.2■□□□□ 0.18
CPNE1-225ENST00000483495 NUTM2BA6NNL0 878 aaPredicted RBP16.2■□□□□ 0.18
CPNE1-225ENST00000483495 NUTM2EB1AL46 878 aaPredicted RBP16.2■□□□□ 0.18
CPNE1-225ENST00000483495 GLRX3O76003 335 aaKnown RBP16.2■□□□□ 0.18
CPNE1-225ENST00000483495 NUTM2AQ8IVF1 878 aaPredicted RBP16.2■□□□□ 0.18
CPNE1-225ENST00000483495 RILPL2Q969X0 211 aa16.2■□□□□ 0.18
CPNE1-225ENST00000483495 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
CPNE1-225ENST00000483495 ISCA1Q9BUE6 129 aa16.2■□□□□ 0.18
CPNE1-225ENST00000483495 TRIM28Q13263 835 aaKnown RBP16.19■□□□□ 0.18
CPNE1-225ENST00000483495 ZBTB3Q9H5J0 574 aa16.19■□□□□ 0.18
CPNE1-225ENST00000483495 TJP1Q07157 1748 aa16.19■□□□□ 0.18
CPNE1-225ENST00000483495 UBAP1LF5GYI3 381 aa16.18■□□□□ 0.18
CPNE1-225ENST00000483495 CYP19A1P11511 503 aaPredicted RBP16.18■□□□□ 0.18
CPNE1-225ENST00000483495 PRIM1P49642 420 aaKnown RBP16.18■□□□□ 0.18
CPNE1-225ENST00000483495 PTPN12Q05209 780 aaKnown RBP16.18■□□□□ 0.18
CPNE1-225ENST00000483495 TCIRG1Q13488 830 aa16.18■□□□□ 0.18
CPNE1-225ENST00000483495 JARID2Q92833 1246 aaPredicted RBP16.18■□□□□ 0.18
CPNE1-225ENST00000483495 GPATCH3Q96I76 525 aa16.18■□□□□ 0.18
CPNE1-225ENST00000483495 ECHDC1Q9NTX5 307 aa16.18■□□□□ 0.18
CPNE1-225ENST00000483495 DOT1LQ8TEK3 1739 aa16.18■□□□□ 0.18
CPNE1-225ENST00000483495 EPB41L2O43491 1005 aaKnown RBP16.18■□□□□ 0.18
CPNE1-225ENST00000483495 IFIT2P09913 472 aaKnown RBP16.18■□□□□ 0.18
CPNE1-225ENST00000483495 FOXO4P98177 505 aa16.18■□□□□ 0.18
CPNE1-225ENST00000483495 RABEP1Q15276 862 aa16.18■□□□□ 0.18
CPNE1-225ENST00000483495 AACSQ86V21 672 aa16.17■□□□□ 0.18
CPNE1-225ENST00000483495 CNTROBQ8N137 903 aa16.17■□□□□ 0.18
CPNE1-225ENST00000483495 MARCH10Q8NA82 808 aaPredicted RBP16.17■□□□□ 0.18
CPNE1-225ENST00000483495 EAF2Q96CJ1 260 aaPredicted RBP16.17■□□□□ 0.18
CPNE1-225ENST00000483495 JCADQ9P266 1359 aa16.17■□□□□ 0.18
CPNE1-225ENST00000483495 KIF6Q6ZMV9 814 aa16.16■□□□□ 0.18
CPNE1-225ENST00000483495 KLHDC4Q8TBB5 520 aa16.16■□□□□ 0.18
CPNE1-225ENST00000483495 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.16■□□□□ 0.18
CPNE1-225ENST00000483495 SYTL4Q96C24 671 aaPredicted RBP16.16■□□□□ 0.18
CPNE1-225ENST00000483495 MAP3K15Q6ZN16 1313 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms