RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 MAGI2Q86UL8 1455 aa9.19□□□□□ -0.94
COL4A5-205ENST00000483338 ROCK1Q13464 1354 aa9.19□□□□□ -0.94
COL4A5-205ENST00000483338 ZNF75DP51815 510 aa9.19□□□□□ -0.94
COL4A5-205ENST00000483338 TBC1D8BQ0IIM8 1120 aa9.19□□□□□ -0.94
COL4A5-205ENST00000483338 ARID5BQ14865 1188 aa9.19□□□□□ -0.94
COL4A5-205ENST00000483338 ZRSR1Q15695 479 aaKnown RBP9.19□□□□□ -0.94
COL4A5-205ENST00000483338 TMX3Q96JJ7 454 aa9.19□□□□□ -0.94
COL4A5-205ENST00000483338 DDX19BQ9UMR2 479 aa9.19□□□□□ -0.94
COL4A5-205ENST00000483338 MYO5CQ9NQX4 1742 aa9.19□□□□□ -0.94
COL4A5-205ENST00000483338 IRX1P78414 480 aaPredicted RBP9.19□□□□□ -0.94
COL4A5-205ENST00000483338 ZBTB40Q9NUA8 1239 aa9.19□□□□□ -0.94
COL4A5-205ENST00000483338 NEO1Q92859 1461 aa9.18□□□□□ -0.94
COL4A5-205ENST00000483338 A0A087WUV0 522 aaPredicted RBP9.18□□□□□ -0.94
COL4A5-205ENST00000483338 TRIM27P14373 513 aa9.18□□□□□ -0.94
COL4A5-205ENST00000483338 LRRC8AQ8IWT6 810 aa9.18□□□□□ -0.94
COL4A5-205ENST00000483338 FAM200AQ8TCP9 573 aa9.18□□□□□ -0.94
COL4A5-205ENST00000483338 GNL3LQ9NVN8 582 aaKnown RBP9.18□□□□□ -0.94
COL4A5-205ENST00000483338 CTAGE5O15320 804 aa9.18□□□□□ -0.94
COL4A5-205ENST00000483338 JAKMIP3Q5VZ66 844 aa9.18□□□□□ -0.94
COL4A5-205ENST00000483338 CC2D1AQ6P1N0 951 aaPredicted RBP9.18□□□□□ -0.94
COL4A5-205ENST00000483338 FAM210AQ96ND0 272 aa9.18□□□□□ -0.94
COL4A5-205ENST00000483338 PSMD1Q99460 953 aa9.18□□□□□ -0.94
COL4A5-205ENST00000483338 PPP6R1Q9UPN7 881 aa9.18□□□□□ -0.94
COL4A5-205ENST00000483338 CNPY2Q9Y2B0 182 aa9.18□□□□□ -0.94
COL4A5-205ENST00000483338 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.18□□□□□ -0.94
COL4A5-205ENST00000483338 ZNF518AQ6AHZ1 1483 aa9.18□□□□□ -0.94
COL4A5-205ENST00000483338 SYNMO15061 1565 aa9.18□□□□□ -0.94
COL4A5-205ENST00000483338 ELF1P32519 619 aa9.18□□□□□ -0.94
COL4A5-205ENST00000483338 ANAPC15P60006 121 aa9.18□□□□□ -0.94
COL4A5-205ENST00000483338 CCT2P78371 535 aaKnown RBP9.18□□□□□ -0.94
COL4A5-205ENST00000483338 LRRC31Q6UY01 552 aa9.18□□□□□ -0.94
COL4A5-205ENST00000483338 GIMAP7Q8NHV1 300 aa9.18□□□□□ -0.94
COL4A5-205ENST00000483338 JPH2Q9BR39 696 aaPredicted RBP9.18□□□□□ -0.94
COL4A5-205ENST00000483338 TRIM5Q9C035 493 aa9.18□□□□□ -0.94
COL4A5-205ENST00000483338 ETAA1Q9NY74 926 aa9.18□□□□□ -0.94
COL4A5-205ENST00000483338 SGSM2O43147 1006 aa9.17□□□□□ -0.94
COL4A5-205ENST00000483338 IPO7O95373 1038 aaKnown RBP9.17□□□□□ -0.94
COL4A5-205ENST00000483338 GSPT1P15170 499 aaKnown RBP9.17□□□□□ -0.94
COL4A5-205ENST00000483338 UBE2HP62256 183 aa9.17□□□□□ -0.94
COL4A5-205ENST00000483338 CCAR2Q8N163 923 aaKnown RBP9.17□□□□□ -0.94
COL4A5-205ENST00000483338 STAG1Q8WVM7 1258 aa9.17□□□□□ -0.94
COL4A5-205ENST00000483338 IRAK4Q9NWZ3 460 aa9.17□□□□□ -0.94
COL4A5-205ENST00000483338 CLIP2Q9UDT6 1046 aa9.17□□□□□ -0.94
COL4A5-205ENST00000483338 CDC42BPAQ5VT25 1732 aa9.17□□□□□ -0.94
COL4A5-205ENST00000483338 ABCA9Q8IUA7 1624 aa9.17□□□□□ -0.94
COL4A5-205ENST00000483338 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.17□□□□□ -0.94
COL4A5-205ENST00000483338 TACO1Q9BSH4 297 aaKnown RBP9.17□□□□□ -0.94
COL4A5-205ENST00000483338 PLEKHA4Q9H4M7 779 aa9.17□□□□□ -0.94
COL4A5-205ENST00000483338 MKRN1Q9UHC7 482 aaKnown RBP9.17□□□□□ -0.94
COL4A5-205ENST00000483338 RPAP1Q9BWH6 1393 aaPredicted RBP9.17□□□□□ -0.94
COL4A5-205ENST00000483338 ECM2O94769 699 aaPredicted RBP9.17□□□□□ -0.94
COL4A5-205ENST00000483338 CCDC192P0DO97 292 aa9.17□□□□□ -0.94
COL4A5-205ENST00000483338 GBP6Q6ZN66 633 aa9.17□□□□□ -0.94
COL4A5-205ENST00000483338 UBXN4Q92575 508 aa9.17□□□□□ -0.94
COL4A5-205ENST00000483338 SAMD9LQ8IVG5 1584 aa9.17□□□□□ -0.94
COL4A5-205ENST00000483338 DIP2BQ9P265 1576 aa9.16□□□□□ -0.94
COL4A5-205ENST00000483338 SKILP12757 684 aa9.16□□□□□ -0.94
COL4A5-205ENST00000483338 ADCY2Q08462 1091 aa9.16□□□□□ -0.94
COL4A5-205ENST00000483338 FBXW10Q5XX13 1052 aa9.16□□□□□ -0.94
COL4A5-205ENST00000483338 SYTL4Q96C24 671 aaPredicted RBP9.16□□□□□ -0.94
COL4A5-205ENST00000483338 FUT8Q9BYC5 575 aa9.16□□□□□ -0.94
COL4A5-205ENST00000483338 NUCKS1Q9H1E3 243 aaKnown RBP9.16□□□□□ -0.94
COL4A5-205ENST00000483338 RRP7AQ9Y3A4 280 aaKnown RBP9.16□□□□□ -0.94
COL4A5-205ENST00000483338 TRPM1Q7Z4N2 1603 aa9.16□□□□□ -0.94
COL4A5-205ENST00000483338 ERLIN2O94905 339 aa9.16□□□□□ -0.94
COL4A5-205ENST00000483338 THOC1Q96FV9 657 aaKnown RBP9.16□□□□□ -0.94
COL4A5-205ENST00000483338 SRCIN1Q9C0H9 1055 aa9.16□□□□□ -0.94
COL4A5-205ENST00000483338 EPC1Q9H2F5 836 aa9.16□□□□□ -0.94
COL4A5-205ENST00000483338 ERBINQ96RT1 1412 aa9.16□□□□□ -0.94
COL4A5-205ENST00000483338 PREX2Q70Z35 1606 aa9.16□□□□□ -0.94
COL4A5-205ENST00000483338 ERCC3P19447 782 aa9.16□□□□□ -0.94
COL4A5-205ENST00000483338 CCNHP51946 323 aaPredicted RBP9.16□□□□□ -0.94
COL4A5-205ENST00000483338 SCRN1Q12765 414 aa9.16□□□□□ -0.94
COL4A5-205ENST00000483338 CUL4AQ13619 759 aa9.16□□□□□ -0.94
COL4A5-205ENST00000483338 C1QTNF12Q5T7M4 302 aa9.16□□□□□ -0.94
COL4A5-205ENST00000483338 TEX11Q8IYF3 940 aa9.16□□□□□ -0.94
COL4A5-205ENST00000483338 KCNB2Q92953 911 aa9.16□□□□□ -0.94
COL4A5-205ENST00000483338 VPS18Q9P253 973 aa9.16□□□□□ -0.94
COL4A5-205ENST00000483338 COQ9O75208 318 aa9.15□□□□□ -0.94
COL4A5-205ENST00000483338 ZNF483Q8TF39 744 aaPredicted RBP9.15□□□□□ -0.94
COL4A5-205ENST00000483338 A1CFQ9NQ94 594 aaKnown RBP9.15□□□□□ -0.94
COL4A5-205ENST00000483338 MCM8Q9UJA3 840 aa9.15□□□□□ -0.94
COL4A5-205ENST00000483338 CCZ1BP86790 482 aa9.15□□□□□ -0.94
COL4A5-205ENST00000483338 CCZ1P86791 482 aaPredicted RBP9.15□□□□□ -0.94
COL4A5-205ENST00000483338 POGZQ7Z3K3 1410 aa9.15□□□□□ -0.94
COL4A5-205ENST00000483338 TMEM57Q8N5G2 664 aa9.15□□□□□ -0.94
COL4A5-205ENST00000483338 N4BP2L2Q92802 583 aaPredicted RBP9.15□□□□□ -0.94
COL4A5-205ENST00000483338 CBX8Q9HC52 389 aa9.15□□□□□ -0.94
COL4A5-205ENST00000483338 AKAP2Q9Y2D5 859 aa9.15□□□□□ -0.94
COL4A5-205ENST00000483338 CDC42BPBQ9Y5S2 1711 aa9.15□□□□□ -0.95
COL4A5-205ENST00000483338 EME2A4GXA9 379 aaPredicted RBP9.14□□□□□ -0.95
COL4A5-205ENST00000483338 GCFC2P16383 781 aaKnown RBP9.14□□□□□ -0.95
COL4A5-205ENST00000483338 LIG3P49916 1009 aa9.14□□□□□ -0.95
COL4A5-205ENST00000483338 GRIK3Q13003 919 aa9.14□□□□□ -0.95
COL4A5-205ENST00000483338 NEDD9Q14511 834 aa9.14□□□□□ -0.95
COL4A5-205ENST00000483338 GORABQ5T7V8 394 aa9.14□□□□□ -0.95
COL4A5-205ENST00000483338 CCDC30Q5VVM6 783 aa9.14□□□□□ -0.95
COL4A5-205ENST00000483338 CTCFLQ8NI51 663 aaPredicted RBP9.14□□□□□ -0.95
COL4A5-205ENST00000483338 VEZTQ9HBM0 779 aa9.14□□□□□ -0.95
COL4A5-205ENST00000483338 CLTCL1P53675 1640 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms