RNA–Protein interactions for RNA: ENST00000483148.5

APTX-226, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,764 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-226ENST00000483148 FCHSD2O94868 740 aa12.53□□□□□ -0.4
APTX-226ENST00000483148 NCLP19338 710 aaKnown RBP12.53□□□□□ -0.4
APTX-226ENST00000483148 MSNP26038 577 aaKnown RBP12.53□□□□□ -0.4
APTX-226ENST00000483148 ATG3Q9NT62 314 aa12.53□□□□□ -0.4
APTX-226ENST00000483148 UTP14CQ5TAP6 766 aaKnown RBP12.53□□□□□ -0.4
APTX-226ENST00000483148 HSCBQ8IWL3 235 aa12.53□□□□□ -0.4
APTX-226ENST00000483148 SLC4A9Q96Q91 983 aa12.53□□□□□ -0.4
APTX-226ENST00000483148 EYA1Q99502 592 aa12.53□□□□□ -0.4
APTX-226ENST00000483148 KIF13BQ9NQT8 1826 aa12.53□□□□□ -0.4
APTX-226ENST00000483148 RIPK4P57078 832 aa12.52□□□□□ -0.41
APTX-226ENST00000483148 ARHGEF1Q92888 912 aaKnown RBP12.52□□□□□ -0.41
APTX-226ENST00000483148 TMOD3Q9NYL9 352 aa12.52□□□□□ -0.41
APTX-226ENST00000483148 WDR90Q96KV7 1748 aa12.52□□□□□ -0.41
APTX-226ENST00000483148 DDIT3P35638 169 aa12.51□□□□□ -0.41
APTX-226ENST00000483148 TRAPPC3LQ5T215 181 aa12.51□□□□□ -0.41
APTX-226ENST00000483148 NLGN1Q8N2Q7 840 aa12.51□□□□□ -0.41
APTX-226ENST00000483148 SPG7Q9UQ90 795 aa12.51□□□□□ -0.41
APTX-226ENST00000483148 KDRP35968 1356 aa12.51□□□□□ -0.41
APTX-226ENST00000483148 C10orf71Q711Q0 1435 aa12.51□□□□□ -0.41
APTX-226ENST00000483148 DYNC1I1O14576 645 aa12.51□□□□□ -0.41
APTX-226ENST00000483148 SNX21Q969T3 373 aa12.51□□□□□ -0.41
APTX-226ENST00000483148 C22orf23Q9BZE7 217 aa12.51□□□□□ -0.41
APTX-226ENST00000483148 RRAGCQ9HB90 399 aa12.51□□□□□ -0.41
APTX-226ENST00000483148 ZNF500O60304 480 aaPredicted RBP12.5□□□□□ -0.41
APTX-226ENST00000483148 GYS1P13807 737 aa12.5□□□□□ -0.41
APTX-226ENST00000483148 FGD1P98174 961 aa12.5□□□□□ -0.41
APTX-226ENST00000483148 FSTL1Q12841 308 aa12.5□□□□□ -0.41
APTX-226ENST00000483148 CSPP1Q1MSJ5 1256 aa12.5□□□□□ -0.41
APTX-226ENST00000483148 TNS4Q8IZW8 715 aa12.5□□□□□ -0.41
APTX-226ENST00000483148 RWDD1Q9H446 243 aaPredicted RBP12.5□□□□□ -0.41
APTX-226ENST00000483148 RTCBQ9Y3I0 505 aaKnown RBP12.5□□□□□ -0.41
APTX-226ENST00000483148 PKD1L3Q7Z443 1732 aa12.5□□□□□ -0.41
APTX-226ENST00000483148 PRELPP51888 382 aa12.49□□□□□ -0.41
APTX-226ENST00000483148 SMC5Q8IY18 1101 aa12.49□□□□□ -0.41
APTX-226ENST00000483148 C16orf71Q8IYS4 520 aaPredicted RBP12.49□□□□□ -0.41
APTX-226ENST00000483148 CCDC87Q9NVE4 849 aa12.49□□□□□ -0.41
APTX-226ENST00000483148 KCPQ6ZWJ8 1503 aa12.49□□□□□ -0.41
APTX-226ENST00000483148 PHKG2P15735 406 aa12.48□□□□□ -0.41
APTX-226ENST00000483148 MCM5P33992 734 aa12.48□□□□□ -0.41
APTX-226ENST00000483148 U2SURPO15042 1029 aaKnown RBP12.48□□□□□ -0.41
APTX-226ENST00000483148 BCAR3O75815 825 aa12.48□□□□□ -0.41
APTX-226ENST00000483148 NASPP49321 788 aaPredicted RBP12.48□□□□□ -0.41
APTX-226ENST00000483148 GAS2L3Q86XJ1 694 aa12.48□□□□□ -0.41
APTX-226ENST00000483148 AEBP1Q8IUX7 1158 aa12.48□□□□□ -0.41
APTX-226ENST00000483148 PDZRN3Q9UPQ7 1066 aa12.48□□□□□ -0.41
APTX-226ENST00000483148 PARP3Q9Y6F1 533 aa12.48□□□□□ -0.41
APTX-226ENST00000483148 PLEKHG2Q9H7P9 1386 aa12.48□□□□□ -0.41
APTX-226ENST00000483148 RPS6KA4O75676 772 aa12.47□□□□□ -0.41
APTX-226ENST00000483148 RC3H1Q5TC82 1133 aaKnown RBP12.47□□□□□ -0.41
APTX-226ENST00000483148 SULT6B1Q6IMI4 303 aa12.47□□□□□ -0.41
APTX-226ENST00000483148 IFNL2Q8IZJ0 200 aa12.47□□□□□ -0.41
APTX-226ENST00000483148 DCAF5Q96JK2 942 aa12.47□□□□□ -0.41
APTX-226ENST00000483148 RBM42Q9BTD8 480 aaKnown RBP12.47□□□□□ -0.41
APTX-226ENST00000483148 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.47□□□□□ -0.411e-6■□□□□ 10.8
APTX-226ENST00000483148 RNF181Q9P0P0 153 aa12.47□□□□□ -0.41
APTX-226ENST00000483148 BRCA1P38398 1863 aaKnown RBP12.47□□□□□ -0.41
APTX-226ENST00000483148 U2AF1L5P0DN76 240 aaPredicted RBP12.46□□□□□ -0.41
APTX-226ENST00000483148 CANXP27824 592 aaKnown RBP12.46□□□□□ -0.41
APTX-226ENST00000483148 U2AF1Q01081 240 aaKnown RBP eCLIP12.46□□□□□ -0.412e-8■■■■■ 37
APTX-226ENST00000483148 RAB3GAP1Q15042 981 aa12.46□□□□□ -0.41
APTX-226ENST00000483148 PIM2Q9P1W9 311 aa12.46□□□□□ -0.41
APTX-226ENST00000483148 HMOX1P09601 288 aa12.46□□□□□ -0.42
APTX-226ENST00000483148 C4AP0C0L4 1744 aa12.46□□□□□ -0.42
APTX-226ENST00000483148 CHRNA5P30532 468 aa12.46□□□□□ -0.42
APTX-226ENST00000483148 RFC4P35249 363 aa12.46□□□□□ -0.42
APTX-226ENST00000483148 SRP68Q9UHB9 627 aaKnown RBP12.46□□□□□ -0.42
APTX-226ENST00000483148 NOL7Q9UMY1 257 aaKnown RBP12.46□□□□□ -0.42
APTX-226ENST00000483148 GOLGA6L22H0YM25 854 aa12.45□□□□□ -0.42
APTX-226ENST00000483148 DDR1Q08345 913 aa12.45□□□□□ -0.42
APTX-226ENST00000483148 DALRD3Q5D0E6 543 aaKnown RBP12.45□□□□□ -0.42
APTX-226ENST00000483148 CLEC17AQ6ZS10 378 aa12.45□□□□□ -0.42
APTX-226ENST00000483148 TNPO1Q92973 898 aaKnown RBP12.45□□□□□ -0.42
APTX-226ENST00000483148 DMTNQ08495 405 aa12.44□□□□□ -0.42
APTX-226ENST00000483148 SPRYD3Q8NCJ5 442 aa12.44□□□□□ -0.42
APTX-226ENST00000483148 FAM13BQ9NYF5 915 aa12.44□□□□□ -0.42
APTX-226ENST00000483148 COG6Q9Y2V7 657 aa12.44□□□□□ -0.42
APTX-226ENST00000483148 MYH14Q7Z406 1995 aaKnown RBP12.44□□□□□ -0.42
APTX-226ENST00000483148 ARFGEF1Q9Y6D6 1849 aa12.44□□□□□ -0.42
APTX-226ENST00000483148 CNTNAP4Q9C0A0 1308 aa12.43□□□□□ -0.42
APTX-226ENST00000483148 RBM25P49756 843 aaKnown RBP12.43□□□□□ -0.42
APTX-226ENST00000483148 R3HCC1Q9Y3T6 440 aaKnown RBP12.43□□□□□ -0.42
APTX-226ENST00000483148 UQCRHLA0A096LP55 91 aa12.43□□□□□ -0.42
APTX-226ENST00000483148 UQCRHP07919 91 aa12.43□□□□□ -0.42
APTX-226ENST00000483148 HSPA1AP0DMV8 641 aaKnown RBP12.43□□□□□ -0.42
APTX-226ENST00000483148 HSPA1BP0DMV9 641 aaKnown RBP12.43□□□□□ -0.42
APTX-226ENST00000483148 ZNF445P59923 1031 aa12.43□□□□□ -0.42
APTX-226ENST00000483148 SMC1BQ8NDV3 1235 aa12.43□□□□□ -0.42
APTX-226ENST00000483148 PLEKHF1Q96S99 279 aa12.43□□□□□ -0.42
APTX-226ENST00000483148 SBF1O95248 1867 aa12.42□□□□□ -0.42
APTX-226ENST00000483148 A0A0U1RQG5 324 aaPredicted RBP12.42□□□□□ -0.42
APTX-226ENST00000483148 ERVV-2B6SEH9 535 aa12.42□□□□□ -0.42
APTX-226ENST00000483148 PRKAR2BP31323 418 aa12.42□□□□□ -0.42
APTX-226ENST00000483148 KLHL40Q2TBA0 621 aa12.42□□□□□ -0.42
APTX-226ENST00000483148 SASS6Q6UVJ0 657 aa12.42□□□□□ -0.42
APTX-226ENST00000483148 CCDC94Q9BW85 323 aaPredicted RBP12.42□□□□□ -0.42
APTX-226ENST00000483148 RASSF7Q02833 373 aa12.41□□□□□ -0.42
APTX-226ENST00000483148 GTPBP4Q9BZE4 634 aaKnown RBP12.41□□□□□ -0.42
APTX-226ENST00000483148 TM4SF1P30408 202 aa12.41□□□□□ -0.42
APTX-226ENST00000483148 CRKLP46109 303 aaKnown RBP12.41□□□□□ -0.42
APTX-226ENST00000483148 PANK1Q8TE04 598 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms