RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 RHPN1Q8TCX5 695 aa14.86□□□□□ -0.03
CCDC78-213ENST00000482878 SYAP1Q96A49 352 aaPredicted RBP14.86□□□□□ -0.03
CCDC78-213ENST00000482878 MAP3K5Q99683 1374 aa14.85□□□□□ -0.03
CCDC78-213ENST00000482878 RPAP1Q9BWH6 1393 aaPredicted RBP14.85□□□□□ -0.03
CCDC78-213ENST00000482878 SGSM2O43147 1006 aa14.85□□□□□ -0.03
CCDC78-213ENST00000482878 POLA2Q14181 598 aa14.85□□□□□ -0.03
CCDC78-213ENST00000482878 DIAPH3Q9NSV4 1193 aa14.85□□□□□ -0.03
CCDC78-213ENST00000482878 SNX14Q9Y5W7 946 aa14.85□□□□□ -0.03
CCDC78-213ENST00000482878 UBR1Q8IWV7 1749 aa14.85□□□□□ -0.03
CCDC78-213ENST00000482878 RASEFQ8IZ41 740 aa14.85□□□□□ -0.03
CCDC78-213ENST00000482878 FAM208AQ9UK61 1670 aaKnown RBP14.85□□□□□ -0.03
CCDC78-213ENST00000482878 RAD50Q92878 1312 aa14.85□□□□□ -0.03
CCDC78-213ENST00000482878 RAB11FIP3O75154 756 aa14.85□□□□□ -0.03
CCDC78-213ENST00000482878 NBPF7P0C2Y1 421 aaPredicted RBP14.85□□□□□ -0.03
CCDC78-213ENST00000482878 LRRC37A3O60309 1634 aa14.84□□□□□ -0.03
CCDC78-213ENST00000482878 SRGAP3O43295 1099 aa14.84□□□□□ -0.03
CCDC78-213ENST00000482878 EPB41L2O43491 1005 aaKnown RBP14.84□□□□□ -0.03
CCDC78-213ENST00000482878 FMN2Q9NZ56 1722 aa14.84□□□□□ -0.03
CCDC78-213ENST00000482878 TTC14Q96N46 770 aa14.84□□□□□ -0.03
CCDC78-213ENST00000482878 LSG1Q9H089 658 aaKnown RBP14.84□□□□□ -0.03
CCDC78-213ENST00000482878 ERICH4A6NGS2 130 aa14.83□□□□□ -0.03
CCDC78-213ENST00000482878 CNPY2Q9Y2B0 182 aa14.83□□□□□ -0.03
CCDC78-213ENST00000482878 RIOK3O14730 519 aaKnown RBP14.83□□□□□ -0.04
CCDC78-213ENST00000482878 AK2P54819 239 aa14.83□□□□□ -0.04
CCDC78-213ENST00000482878 PXDNLA1KZ92 1463 aa14.83□□□□□ -0.04
CCDC78-213ENST00000482878 RUFY3Q7L099 469 aa14.82□□□□□ -0.04
CCDC78-213ENST00000482878 KIF1BPQ96EK5 621 aa14.82□□□□□ -0.04
CCDC78-213ENST00000482878 TRERF1Q96PN7 1200 aa14.82□□□□□ -0.04
CCDC78-213ENST00000482878 SPG7Q9UQ90 795 aa14.82□□□□□ -0.04
CCDC78-213ENST00000482878 NWD1Q149M9 1564 aa14.82□□□□□ -0.04
CCDC78-213ENST00000482878 PHF14O94880 888 aa14.82□□□□□ -0.04
CCDC78-213ENST00000482878 CWC27Q6UX04 472 aaKnown RBP14.82□□□□□ -0.04
CCDC78-213ENST00000482878 BABAM1Q9NWV8 329 aa14.82□□□□□ -0.04
CCDC78-213ENST00000482878 DTNBO60941 627 aa14.82□□□□□ -0.04
CCDC78-213ENST00000482878 CPA1P15085 419 aa14.82□□□□□ -0.04
CCDC78-213ENST00000482878 TMEM87AQ8NBN3 555 aa14.82□□□□□ -0.04
CCDC78-213ENST00000482878 ADCY5O95622 1261 aa14.81□□□□□ -0.04
CCDC78-213ENST00000482878 KCNA6P17658 529 aa14.81□□□□□ -0.04
CCDC78-213ENST00000482878 CCDC66A2RUB6 948 aa14.81□□□□□ -0.04
CCDC78-213ENST00000482878 ZSCAN22P10073 491 aaPredicted RBP14.81□□□□□ -0.04
CCDC78-213ENST00000482878 SYT1P21579 422 aa14.81□□□□□ -0.04
CCDC78-213ENST00000482878 CNTROBQ8N137 903 aa14.81□□□□□ -0.04
CCDC78-213ENST00000482878 THEMISQ8N1K5 641 aaPredicted RBP14.81□□□□□ -0.04
CCDC78-213ENST00000482878 PIK3C2AO00443 1686 aa14.81□□□□□ -0.04
CCDC78-213ENST00000482878 GTF2F1P35269 517 aaKnown RBP eCLIP14.8□□□□□ -0.04
CCDC78-213ENST00000482878 IRX5P78411 483 aaPredicted RBP14.8□□□□□ -0.04
CCDC78-213ENST00000482878 CHPF2Q9P2E5 772 aa14.8□□□□□ -0.04
CCDC78-213ENST00000482878 LIMCH1Q9UPQ0 1083 aa14.8□□□□□ -0.04
CCDC78-213ENST00000482878 PI4KAP2A4QPH2 592 aa14.8□□□□□ -0.04
CCDC78-213ENST00000482878 STX6O43752 255 aa14.8□□□□□ -0.04
CCDC78-213ENST00000482878 BEND3Q5T5X7 828 aa14.8□□□□□ -0.04
CCDC78-213ENST00000482878 PI4KAP1Q8N8J0 262 aa14.8□□□□□ -0.04
CCDC78-213ENST00000482878 LARGE1O95461 756 aa14.79□□□□□ -0.04
CCDC78-213ENST00000482878 ANXA1P04083 346 aa14.79□□□□□ -0.04
CCDC78-213ENST00000482878 CCDC183Q5T5S1 534 aa14.79□□□□□ -0.04
CCDC78-213ENST00000482878 SPC24Q8NBT2 197 aa14.79□□□□□ -0.04
CCDC78-213ENST00000482878 LGR6Q9HBX8 967 aa14.79□□□□□ -0.04
CCDC78-213ENST00000482878 EIF4A1P60842 406 aaKnown RBP14.79□□□□□ -0.04
CCDC78-213ENST00000482878 OGFRQ9NZT2 677 aa14.79□□□□□ -0.04
CCDC78-213ENST00000482878 KCNQ3O43525 872 aa14.78□□□□□ -0.04
CCDC78-213ENST00000482878 CASTP20810 708 aaKnown RBP14.78□□□□□ -0.04
CCDC78-213ENST00000482878 DNAAF4Q8WXU2 420 aa14.78□□□□□ -0.04
CCDC78-213ENST00000482878 SETD1BQ9UPS6 1966 aaKnown RBP14.78□□□□□ -0.04
CCDC78-213ENST00000482878 DIP2AQ14689 1571 aa14.78□□□□□ -0.04
CCDC78-213ENST00000482878 CSB-PGBD3P0DP91 1061 aa14.78□□□□□ -0.04
CCDC78-213ENST00000482878 HCLS1P14317 486 aaPredicted RBP14.78□□□□□ -0.04
CCDC78-213ENST00000482878 FAM184AQ8NB25 1140 aa14.78□□□□□ -0.04
CCDC78-213ENST00000482878 SMC3Q9UQE7 1217 aa14.78□□□□□ -0.04
CCDC78-213ENST00000482878 FIBPO43427 364 aa14.78□□□□□ -0.04
CCDC78-213ENST00000482878 F13A1P00488 732 aa14.78□□□□□ -0.04
CCDC78-213ENST00000482878 ZC3H6P61129 1189 aaKnown RBP14.78□□□□□ -0.04
CCDC78-213ENST00000482878 CERS3Q8IU89 383 aa14.78□□□□□ -0.04
CCDC78-213ENST00000482878 FEZ1Q99689 392 aa14.78□□□□□ -0.04
CCDC78-213ENST00000482878 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.78□□□□□ -0.04
CCDC78-213ENST00000482878 UBE2HP62256 183 aa14.77□□□□□ -0.04
CCDC78-213ENST00000482878 PTH1RQ03431 593 aa14.77□□□□□ -0.04
CCDC78-213ENST00000482878 HYPKQ9NX55 129 aa14.77□□□□□ -0.04
CCDC78-213ENST00000482878 TBX22Q9Y458 520 aa14.77□□□□□ -0.04
CCDC78-213ENST00000482878 UVSSAQ2YD98 709 aa14.77□□□□□ -0.05
CCDC78-213ENST00000482878 ADCK5Q3MIX3 580 aa14.77□□□□□ -0.05
CCDC78-213ENST00000482878 TIGD1Q96MW7 591 aa14.77□□□□□ -0.05
CCDC78-213ENST00000482878 CEMIPQ8WUJ3 1361 aa14.77□□□□□ -0.05
CCDC78-213ENST00000482878 OS9Q13438 667 aaPredicted RBP14.76□□□□□ -0.05
CCDC78-213ENST00000482878 CCDC83Q8IWF9 413 aa14.76□□□□□ -0.05
CCDC78-213ENST00000482878 USP42Q9H9J4 1324 aaKnown RBP14.76□□□□□ -0.05
CCDC78-213ENST00000482878 ZNF330Q9Y3S2 320 aaPredicted RBP14.76□□□□□ -0.05
CCDC78-213ENST00000482878 CCDC9Q9Y3X0 531 aaKnown RBP14.76□□□□□ -0.05
CCDC78-213ENST00000482878 GLRX3O76003 335 aaKnown RBP14.75□□□□□ -0.05
CCDC78-213ENST00000482878 GJB2P29033 226 aa14.75□□□□□ -0.05
CCDC78-213ENST00000482878 DDX54Q8TDD1 881 aaKnown RBP14.75□□□□□ -0.05
CCDC78-213ENST00000482878 RGPD8O14715 1765 aaPredicted RBP14.75□□□□□ -0.05
CCDC78-213ENST00000482878 TTC41PQ6P2S7 1318 aa14.75□□□□□ -0.05
CCDC78-213ENST00000482878 DNM1Q05193 864 aaKnown RBP14.75□□□□□ -0.05
CCDC78-213ENST00000482878 AIMP1Q12904 312 aaKnown RBP14.75□□□□□ -0.05
CCDC78-213ENST00000482878 HSP90AB4PQ58FF6 505 aa14.75□□□□□ -0.05
CCDC78-213ENST00000482878 PRPF40BQ6NWY9 871 aaKnown RBP14.75□□□□□ -0.05
CCDC78-213ENST00000482878 JAKMIP1Q96N16 626 aaKnown RBP14.75□□□□□ -0.05
CCDC78-213ENST00000482878 N4BP2Q86UW6 1770 aaPredicted RBP14.75□□□□□ -0.05
CCDC78-213ENST00000482878 ADCY9O60503 1353 aa14.75□□□□□ -0.05
CCDC78-213ENST00000482878 GABPB1Q06547 395 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms