RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 ANP32BQ92688 251 aaKnown RBP14.53□□□□□ -0.08
RAPGEF3-210ENST00000482843 ARHGAP23Q9P227 1491 aa14.53□□□□□ -0.08
RAPGEF3-210ENST00000482843 NUCB2P80303 420 aa14.53□□□□□ -0.08
RAPGEF3-210ENST00000482843 COPS6Q7L5N1 327 aa14.53□□□□□ -0.08
RAPGEF3-210ENST00000482843 BAG4O95429 457 aaKnown RBP14.52□□□□□ -0.08
RAPGEF3-210ENST00000482843 MYCNP04198 464 aaPredicted RBP14.52□□□□□ -0.08
RAPGEF3-210ENST00000482843 XAGE3Q8WTP9 111 aa14.52□□□□□ -0.08
RAPGEF3-210ENST00000482843 PRDM16Q9HAZ2 1276 aa14.52□□□□□ -0.08
RAPGEF3-210ENST00000482843 ZHX1Q9UKY1 873 aaPredicted RBP14.52□□□□□ -0.08
RAPGEF3-210ENST00000482843 CABP4P57796 275 aa14.52□□□□□ -0.09
RAPGEF3-210ENST00000482843 TOM1L2Q6ZVM7 507 aa14.52□□□□□ -0.09
RAPGEF3-210ENST00000482843 GPATCH3Q96I76 525 aa14.52□□□□□ -0.09
RAPGEF3-210ENST00000482843 PRDM11Q9NQV5 511 aa14.52□□□□□ -0.09
RAPGEF3-210ENST00000482843 CPA1P15085 419 aa14.51□□□□□ -0.09
RAPGEF3-210ENST00000482843 KSR2Q6VAB6 950 aa14.51□□□□□ -0.09
RAPGEF3-210ENST00000482843 TMX3Q96JJ7 454 aa14.51□□□□□ -0.09
RAPGEF3-210ENST00000482843 BOLA2Q9H3K6 86 aa14.51□□□□□ -0.09
RAPGEF3-210ENST00000482843 SLIT1O75093 1534 aa14.51□□□□□ -0.09
RAPGEF3-210ENST00000482843 PTMAP06454 111 aaKnown RBP14.51□□□□□ -0.09
RAPGEF3-210ENST00000482843 HSP90AB4PQ58FF6 505 aa14.51□□□□□ -0.09
RAPGEF3-210ENST00000482843 SSH3Q8TE77 659 aa14.51□□□□□ -0.09
RAPGEF3-210ENST00000482843 IBTKQ9P2D0 1353 aaPredicted RBP14.51□□□□□ -0.09
RAPGEF3-210ENST00000482843 NPHP4O75161 1426 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF3-210ENST00000482843 RAB11FIP3O75154 756 aa14.5□□□□□ -0.09
RAPGEF3-210ENST00000482843 ZNF790Q6PG37 636 aa14.5□□□□□ -0.09
RAPGEF3-210ENST00000482843 ZNF496Q96IT1 587 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF3-210ENST00000482843 AKAP12Q02952 1782 aa14.5□□□□□ -0.09
RAPGEF3-210ENST00000482843 EVA1CP58658 441 aa14.49□□□□□ -0.09
RAPGEF3-210ENST00000482843 BICC1Q9H694 974 aaKnown RBP14.49□□□□□ -0.09
RAPGEF3-210ENST00000482843 GRPEL1Q9HAV7 217 aa14.49□□□□□ -0.09
RAPGEF3-210ENST00000482843 GDPD2Q9HCC8 539 aa14.49□□□□□ -0.09
RAPGEF3-210ENST00000482843 HYPKQ9NX55 129 aa14.49□□□□□ -0.09
RAPGEF3-210ENST00000482843 USP16Q9Y5T5 823 aa14.49□□□□□ -0.09
RAPGEF3-210ENST00000482843 FER1L4A9Z1Z3 1794 aa14.49□□□□□ -0.09
RAPGEF3-210ENST00000482843 GRM8O00222 908 aa14.49□□□□□ -0.09
RAPGEF3-210ENST00000482843 SKOR2Q2VWA4 1001 aaPredicted RBP14.49□□□□□ -0.09
RAPGEF3-210ENST00000482843 HDAC5Q9UQL6 1122 aa14.49□□□□□ -0.09
RAPGEF3-210ENST00000482843 UBE3BQ7Z3V4 1068 aa14.48□□□□□ -0.09
RAPGEF3-210ENST00000482843 CCDC85AQ96PX6 553 aaPredicted RBP14.48□□□□□ -0.09
RAPGEF3-210ENST00000482843 IL25Q9H293 177 aa14.48□□□□□ -0.09
RAPGEF3-210ENST00000482843 BABAM1Q9NWV8 329 aa14.48□□□□□ -0.09
RAPGEF3-210ENST00000482843 KNDC1Q76NI1 1749 aa14.48□□□□□ -0.09
RAPGEF3-210ENST00000482843 IRX3P78415 501 aaPredicted RBP14.48□□□□□ -0.09
RAPGEF3-210ENST00000482843 FSD1Q9BTV5 496 aa14.48□□□□□ -0.09
RAPGEF3-210ENST00000482843 SUCLG2Q96I99 432 aa14.48□□□□□ -0.09
RAPGEF3-210ENST00000482843 NDUFB9Q9Y6M9 179 aa14.48□□□□□ -0.09
RAPGEF3-210ENST00000482843 ADGRL3Q9HAR2 1447 aa14.47□□□□□ -0.09
RAPGEF3-210ENST00000482843 IFNL2Q8IZJ0 200 aa14.47□□□□□ -0.09
RAPGEF3-210ENST00000482843 RBM27Q9P2N5 1060 aaKnown RBP14.47□□□□□ -0.09
RAPGEF3-210ENST00000482843 ERBB3P21860 1342 aa14.47□□□□□ -0.09
RAPGEF3-210ENST00000482843 MRE11P49959 708 aa14.47□□□□□ -0.09
RAPGEF3-210ENST00000482843 PRPF40BQ6NWY9 871 aaKnown RBP14.47□□□□□ -0.09
RAPGEF3-210ENST00000482843 NEUROD6Q96NK8 337 aa14.47□□□□□ -0.09
RAPGEF3-210ENST00000482843 DNAJC2Q99543 621 aaKnown RBP14.47□□□□□ -0.09
RAPGEF3-210ENST00000482843 OSBPL3Q9H4L5 887 aa14.47□□□□□ -0.09
RAPGEF3-210ENST00000482843 NRKQ7Z2Y5 1582 aa14.47□□□□□ -0.09
RAPGEF3-210ENST00000482843 GLRX3O76003 335 aaKnown RBP14.47□□□□□ -0.09
RAPGEF3-210ENST00000482843 RGS22Q8NE09 1264 aa14.47□□□□□ -0.09
RAPGEF3-210ENST00000482843 TMEM94Q12767 1356 aa14.46□□□□□ -0.09
RAPGEF3-210ENST00000482843 LINS1Q8NG48 757 aa14.46□□□□□ -0.09
RAPGEF3-210ENST00000482843 TCEANC2Q96MN5 208 aa14.46□□□□□ -0.09
RAPGEF3-210ENST00000482843 CASTP20810 708 aaKnown RBP14.46□□□□□ -0.1
RAPGEF3-210ENST00000482843 LARP1Q6PKG0 1096 aaKnown RBP14.46□□□□□ -0.1
RAPGEF3-210ENST00000482843 ANKRD13DQ6ZTN6 518 aa14.46□□□□□ -0.1
RAPGEF3-210ENST00000482843 DDX21Q9NR30 783 aaKnown RBP eCLIP14.46□□□□□ -0.1
RAPGEF3-210ENST00000482843 ECHDC1Q9NTX5 307 aa14.46□□□□□ -0.1
RAPGEF3-210ENST00000482843 SYTL4Q96C24 671 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF3-210ENST00000482843 PIK3C2AO00443 1686 aa14.45□□□□□ -0.1
RAPGEF3-210ENST00000482843 RNF214Q8ND24 703 aa14.45□□□□□ -0.1
RAPGEF3-210ENST00000482843 RUFY2Q8WXA3 655 aa14.45□□□□□ -0.1
RAPGEF3-210ENST00000482843 JAKMIP1Q96N16 626 aaKnown RBP14.45□□□□□ -0.1
RAPGEF3-210ENST00000482843 ZBTB3Q9H5J0 574 aa14.45□□□□□ -0.1
RAPGEF3-210ENST00000482843 A0A087WZG4 1122 aa14.45□□□□□ -0.1
RAPGEF3-210ENST00000482843 GAS2L3Q86XJ1 694 aa14.45□□□□□ -0.1
RAPGEF3-210ENST00000482843 EDC3Q96F86 508 aaKnown RBP14.45□□□□□ -0.1
RAPGEF3-210ENST00000482843 SLC52A2Q9HAB3 445 aa14.45□□□□□ -0.1
RAPGEF3-210ENST00000482843 CADPS2Q86UW7 1296 aa14.44□□□□□ -0.1
RAPGEF3-210ENST00000482843 ADCY9O60503 1353 aa14.44□□□□□ -0.1
RAPGEF3-210ENST00000482843 NPHP3Q7Z494 1330 aa14.44□□□□□ -0.1
RAPGEF3-210ENST00000482843 HOXB7P09629 217 aa14.44□□□□□ -0.1
RAPGEF3-210ENST00000482843 CEMIPQ8WUJ3 1361 aa14.43□□□□□ -0.1
RAPGEF3-210ENST00000482843 KAT6BQ8WYB5 2073 aa14.43□□□□□ -0.1
RAPGEF3-210ENST00000482843 PHKG2P15735 406 aa14.43□□□□□ -0.1
RAPGEF3-210ENST00000482843 VIRMAQ69YN4 1812 aaKnown RBP14.43□□□□□ -0.1
RAPGEF3-210ENST00000482843 ALDH1L1O75891 902 aa14.43□□□□□ -0.1
RAPGEF3-210ENST00000482843 SNRPA1P09661 255 aaKnown RBP14.43□□□□□ -0.1
RAPGEF3-210ENST00000482843 ZKSCAN1P17029 563 aaPredicted RBP14.43□□□□□ -0.1
RAPGEF3-210ENST00000482843 ERC1Q8IUD2 1116 aa14.43□□□□□ -0.1
RAPGEF3-210ENST00000482843 TLR7Q9NYK1 1049 aaKnown RBP14.43□□□□□ -0.1
RAPGEF3-210ENST00000482843 STAP2Q9UGK3 403 aa14.42□□□□□ -0.1
RAPGEF3-210ENST00000482843 VPS37CA5D8V6 355 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF3-210ENST00000482843 PI4K2BQ8TCG2 481 aa14.42□□□□□ -0.1
RAPGEF3-210ENST00000482843 FAM227BQ96M60 508 aa14.42□□□□□ -0.1
RAPGEF3-210ENST00000482843 FMNL2Q96PY5 1086 aa14.42□□□□□ -0.1
RAPGEF3-210ENST00000482843 DDIT3P35638 169 aa14.42□□□□□ -0.1
RAPGEF3-210ENST00000482843 POLA2Q14181 598 aa14.42□□□□□ -0.1
RAPGEF3-210ENST00000482843 RASEFQ8IZ41 740 aa14.42□□□□□ -0.1
RAPGEF3-210ENST00000482843 EAF2Q96CJ1 260 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF3-210ENST00000482843 SMC3Q9UQE7 1217 aa14.42□□□□□ -0.1
RAPGEF3-210ENST00000482843 PXDNQ92626 1479 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms