RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 MS4A4AQ96JQ5 239 aa10.12□□□□□ -0.79
TVP23B-203ENST00000482741 DDX60LQ5H9U9 1706 aaKnown RBP10.11□□□□□ -0.79
TVP23B-203ENST00000482741 PALM3A6NDB9 673 aaPredicted RBP10.11□□□□□ -0.79
TVP23B-203ENST00000482741 IQSEC3Q9UPP2 1182 aaPredicted RBP10.11□□□□□ -0.79
TVP23B-203ENST00000482741 LIMD1Q9UGP4 676 aa10.11□□□□□ -0.79
TVP23B-203ENST00000482741 KNSTRNQ9Y448 316 aa10.11□□□□□ -0.79
TVP23B-203ENST00000482741 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.11□□□□□ -0.79
TVP23B-203ENST00000482741 CREBZFQ9NS37 354 aa10.11□□□□□ -0.79
TVP23B-203ENST00000482741 LAMA4Q16363 1823 aa10.1□□□□□ -0.79
TVP23B-203ENST00000482741 DICER1Q9UPY3 1922 aaKnown RBP10.1□□□□□ -0.79
TVP23B-203ENST00000482741 LOC102724159A0A0B4J2E5 919 aa10.1□□□□□ -0.79
TVP23B-203ENST00000482741 TMEM88BA6NKF7 163 aa10.1□□□□□ -0.79
TVP23B-203ENST00000482741 PWP2Q15269 919 aaKnown RBP10.1□□□□□ -0.79
TVP23B-203ENST00000482741 DPH6Q7L8W6 267 aa10.1□□□□□ -0.79
TVP23B-203ENST00000482741 TFIP11Q9UBB9 837 aaKnown RBP10.1□□□□□ -0.79
TVP23B-203ENST00000482741 TOM1O60784 492 aa10.1□□□□□ -0.79
TVP23B-203ENST00000482741 LGR5O75473 907 aa10.1□□□□□ -0.79
TVP23B-203ENST00000482741 PRIM1P49642 420 aaKnown RBP10.1□□□□□ -0.79
TVP23B-203ENST00000482741 KRT28Q7Z3Y7 464 aa10.1□□□□□ -0.79
TVP23B-203ENST00000482741 GPATCH3Q96I76 525 aa10.1□□□□□ -0.79
TVP23B-203ENST00000482741 ANO2Q9NQ90 1003 aa10.1□□□□□ -0.79
TVP23B-203ENST00000482741 AP1G2O75843 785 aa10.09□□□□□ -0.79
TVP23B-203ENST00000482741 ATF3P18847 181 aa10.09□□□□□ -0.79
TVP23B-203ENST00000482741 CAMK2BQ13554 666 aa10.09□□□□□ -0.79
TVP23B-203ENST00000482741 FOXD4L6Q3SYB3 417 aaPredicted RBP10.09□□□□□ -0.79
TVP23B-203ENST00000482741 FOXD4L3Q6VB84 417 aaPredicted RBP10.09□□□□□ -0.79
TVP23B-203ENST00000482741 PPP1R12CQ9BZL4 782 aa10.09□□□□□ -0.79
TVP23B-203ENST00000482741 BCL11AQ9H165 835 aa10.09□□□□□ -0.79
TVP23B-203ENST00000482741 COL4A1P02462 1669 aa10.09□□□□□ -0.79
TVP23B-203ENST00000482741 SPATA31A1Q5TZJ5 1347 aa10.09□□□□□ -0.79
TVP23B-203ENST00000482741 TBC1D12O60347 775 aa10.09□□□□□ -0.79
TVP23B-203ENST00000482741 NLRP6P59044 892 aa10.09□□□□□ -0.79
TVP23B-203ENST00000482741 AMOTQ4VCS5 1084 aa10.09□□□□□ -0.79
TVP23B-203ENST00000482741 BCCIPQ9P287 314 aaKnown RBP eCLIP10.09□□□□□ -0.79
TVP23B-203ENST00000482741 PPME1Q9Y570 386 aa10.09□□□□□ -0.79
TVP23B-203ENST00000482741 QPCTQ16769 361 aa10.08□□□□□ -0.8
TVP23B-203ENST00000482741 RUNDC1Q96C34 613 aa10.08□□□□□ -0.8
TVP23B-203ENST00000482741 KAT6BQ8WYB5 2073 aa10.08□□□□□ -0.8
TVP23B-203ENST00000482741 PDE6BP35913 854 aa10.08□□□□□ -0.8
TVP23B-203ENST00000482741 CLK2P49760 499 aaKnown RBP10.08□□□□□ -0.8
TVP23B-203ENST00000482741 MFSD10Q14728 455 aa10.08□□□□□ -0.8
TVP23B-203ENST00000482741 COG3Q96JB2 828 aa10.08□□□□□ -0.8
TVP23B-203ENST00000482741 CLSTN1O94985 981 aa10.07□□□□□ -0.8
TVP23B-203ENST00000482741 PDIA6Q15084 440 aa10.07□□□□□ -0.8
TVP23B-203ENST00000482741 DHX38Q92620 1227 aaKnown RBP10.07□□□□□ -0.8
TVP23B-203ENST00000482741 MYH14Q7Z406 1995 aaKnown RBP10.07□□□□□ -0.8
TVP23B-203ENST00000482741 DSG2Q14126 1118 aa10.06□□□□□ -0.8
TVP23B-203ENST00000482741 DIEXFQ68CQ4 756 aaKnown RBP10.06□□□□□ -0.8
TVP23B-203ENST00000482741 DNAJC14Q6Y2X3 702 aaPredicted RBP10.06□□□□□ -0.8
TVP23B-203ENST00000482741 COL11A2P13942 1736 aaPredicted RBP10.06□□□□□ -0.8
TVP23B-203ENST00000482741 HIC1Q14526 733 aa10.06□□□□□ -0.8
TVP23B-203ENST00000482741 EIF4A2Q14240 407 aaKnown RBP10.06□□□□□ -0.8
TVP23B-203ENST00000482741 FAM161BQ96MY7 647 aa10.06□□□□□ -0.8
TVP23B-203ENST00000482741 USTQ9Y2C2 406 aa10.06□□□□□ -0.8
TVP23B-203ENST00000482741 IFT57Q9NWB7 429 aa10.05□□□□□ -0.8
TVP23B-203ENST00000482741 ANKRD33BA6NCL7 494 aa10.05□□□□□ -0.8
TVP23B-203ENST00000482741 ANP32CO43423 234 aa10.05□□□□□ -0.8
TVP23B-203ENST00000482741 GCP02774 474 aa10.05□□□□□ -0.8
TVP23B-203ENST00000482741 TSC1Q92574 1164 aa10.05□□□□□ -0.8
TVP23B-203ENST00000482741 ARHGAP45Q92619 1136 aa10.05□□□□□ -0.8
TVP23B-203ENST00000482741 UCN2Q96RP3 112 aa10.05□□□□□ -0.8
TVP23B-203ENST00000482741 CDHR5Q9HBB8 845 aa10.04□□□□□ -0.8
TVP23B-203ENST00000482741 ALDH1L2Q3SY69 923 aa10.04□□□□□ -0.8
TVP23B-203ENST00000482741 GABBR1Q9UBS5 961 aa10.04□□□□□ -0.8
TVP23B-203ENST00000482741 MAP4K4O95819 1239 aaPredicted RBP10.04□□□□□ -0.8
TVP23B-203ENST00000482741 LMOD3Q0VAK6 560 aa10.04□□□□□ -0.8
TVP23B-203ENST00000482741 TRIM35Q9UPQ4 493 aa10.04□□□□□ -0.8
TVP23B-203ENST00000482741 EXOC8Q8IYI6 725 aa10.03□□□□□ -0.8
TVP23B-203ENST00000482741 MYH7P12883 1935 aa10.03□□□□□ -0.8
TVP23B-203ENST00000482741 GTF2F1P35269 517 aaKnown RBP eCLIP10.03□□□□□ -0.8
TVP23B-203ENST00000482741 FAM9BQ8IZU0 186 aa10.03□□□□□ -0.8
TVP23B-203ENST00000482741 RIPOR2Q9Y4F9 1068 aa10.03□□□□□ -0.8
TVP23B-203ENST00000482741 UTYO14607 1347 aa10.03□□□□□ -0.8
TVP23B-203ENST00000482741 TIAM2Q8IVF5 1701 aa10.03□□□□□ -0.8
TVP23B-203ENST00000482741 KIF16BQ96L93 1317 aa10.02□□□□□ -0.8
TVP23B-203ENST00000482741 ERVV-2B6SEH9 535 aa10.02□□□□□ -0.8
TVP23B-203ENST00000482741 CENPBP07199 599 aaPredicted RBP10.02□□□□□ -0.8
TVP23B-203ENST00000482741 SRPK2P78362 688 aaKnown RBP10.02□□□□□ -0.8
TVP23B-203ENST00000482741 PRR29P0C7W0 189 aa10.02□□□□□ -0.81
TVP23B-203ENST00000482741 CALD1Q05682 793 aaKnown RBP10.02□□□□□ -0.81
TVP23B-203ENST00000482741 PMFBP1Q8TBY8 1022 aa10.02□□□□□ -0.81
TVP23B-203ENST00000482741 NCLP19338 710 aaKnown RBP10.02□□□□□ -0.81
TVP23B-203ENST00000482741 NFE2L2Q16236 605 aa10.02□□□□□ -0.81
TVP23B-203ENST00000482741 NME9Q86XW9 330 aa10.02□□□□□ -0.81
TVP23B-203ENST00000482741 ORAI2Q96SN7 254 aa10.02□□□□□ -0.81
TVP23B-203ENST00000482741 RECKO95980 971 aa10.01□□□□□ -0.81
TVP23B-203ENST00000482741 LRP10Q7Z4F1 713 aa10.01□□□□□ -0.81
TVP23B-203ENST00000482741 IFNL1Q8IU54 200 aa10.01□□□□□ -0.81
TVP23B-203ENST00000482741 CFAP53Q96M91 514 aa10.01□□□□□ -0.81
TVP23B-203ENST00000482741 LOC285556D6RIA3 1793 aa10.01□□□□□ -0.81
TVP23B-203ENST00000482741 ERCC5P28715 1186 aaPredicted RBP10.01□□□□□ -0.81
TVP23B-203ENST00000482741 MARSP56192 900 aaKnown RBP10.01□□□□□ -0.81
TVP23B-203ENST00000482741 SLFN5Q08AF3 891 aa10.01□□□□□ -0.81
TVP23B-203ENST00000482741 AKAP4Q5JQC9 854 aa10.01□□□□□ -0.81
TVP23B-203ENST00000482741 TMEM164Q5U3C3 297 aa10.01□□□□□ -0.81
TVP23B-203ENST00000482741 HMX1Q9NP08 348 aaPredicted RBP10.01□□□□□ -0.81
TVP23B-203ENST00000482741 GPCPD1Q9NPB8 672 aa10.01□□□□□ -0.81
TVP23B-203ENST00000482741 RTL9Q8NET4 1388 aa10.01□□□□□ -0.81
TVP23B-203ENST00000482741 CHL1O00533 1208 aa10.01□□□□□ -0.81
TVP23B-203ENST00000482741 HSPA2P54652 639 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms